GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001016-TA|BGIBMGA001016-PA|undefined
         (154 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-3275|AAF49072.2|  402|Drosophila melanogaster CG14185-P...    60   1e-09

>AE014296-3275|AAF49072.2|  402|Drosophila melanogaster CG14185-PA
           protein.
          Length = 402

 Score = 60.5 bits (140), Expect = 1e-09
 Identities = 38/84 (45%), Positives = 55/84 (65%), Gaps = 7/84 (8%)

Query: 75  IVIPR---ELTLIELLKQSSGVNSDEEVLRIREAKLRVIAERVGLRRLHVLAPRLRSLIL 131
           +V+P+   E TL ELL++   V    ++  + + +LRVI+  V L RL +  PRL+SL L
Sbjct: 95  VVLPQQGPEPTLDELLRR---VTQRTDLEAVEQVRLRVISYTVSLSRLSLFLPRLQSLDL 151

Query: 132 DGSALSSLRDLGIGLVHL-KVDVS 154
            GS LSSLRDLG GL+ L ++D+S
Sbjct: 152 SGSVLSSLRDLGYGLLQLTRLDIS 175


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.325    0.142    0.389 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,407,541
Number of Sequences: 52641
Number of extensions: 123828
Number of successful extensions: 423
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 422
Number of HSP's gapped (non-prelim): 1
length of query: 154
length of database: 24,830,863
effective HSP length: 79
effective length of query: 75
effective length of database: 20,672,224
effective search space: 1550416800
effective search space used: 1550416800
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 58 (27.5 bits)