Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001016-TA|BGIBMGA001016-PA|undefined
(154 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g28430.1 68418.m03453 hypothetical protein 28 2.4
At1g79330.1 68414.m09245 latex-abundant protein, putative (AMC6)... 28 2.4
At5g44270.1 68418.m05418 hypothetical protein 27 4.3
At4g09570.1 68417.m01575 calcium-dependent protein kinase, putat... 27 4.3
At2g41860.2 68415.m05174 calcium-dependent protein kinase, putat... 27 4.3
At2g41860.1 68415.m05173 calcium-dependent protein kinase, putat... 27 4.3
At1g35670.1 68414.m04435 calcium-dependent protein kinase 2 (CDP... 27 4.3
At2g35890.1 68415.m04406 calcium-dependent protein kinase, putat... 27 5.6
At1g27180.1 68414.m03311 disease resistance protein (TIR-NBS-LRR... 27 7.4
At4g19510.2 68417.m02870 disease resistance protein (TIR-NBS-LRR... 26 9.8
At4g19510.1 68417.m02869 disease resistance protein (TIR-NBS-LRR... 26 9.8
At4g09120.1 68417.m01505 zinc finger (C3HC4-type RING finger) fa... 26 9.8
>At5g28430.1 68418.m03453 hypothetical protein
Length = 486
Score = 28.3 bits (60), Expect = 2.4
Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Query: 92 GVNSDEEVLRIREAKLRVIAERVGLRRLHVLAPRLRSLILDGSALSSLR-DLGIGLVHLK 150
G N E++LR+ E K AE+ ++ V+ S + +LS LR G+G V L+
Sbjct: 115 GPNETEDILRLNEQKAFEKAEKRKKKKKAVMPDPPGSSLCTERSLSDLRARFGLGAVTLR 174
Query: 151 V 151
V
Sbjct: 175 V 175
>At1g79330.1 68414.m09245 latex-abundant protein, putative (AMC6) /
caspase family protein similar to latex-abundant protein
[Hevea brasiliensis] gb:AAD13216; contains Pfam domain,
PF00656: ICE-like protease (caspase) p20 domain
Length = 410
Score = 28.3 bits (60), Expect = 2.4
Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Query: 82 TLIELLKQSSGVNSDEEVLRIREAKLRVIAE 112
TLI++LKQ++G N+D EV +IR V E
Sbjct: 225 TLIDILKQNTG-NNDIEVGKIRPTLFNVFGE 254
>At5g44270.1 68418.m05418 hypothetical protein
Length = 309
Score = 27.5 bits (58), Expect = 4.3
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Query: 67 RRLPGYRRIVIPRELTLIELLKQSSGVNSDEEVLRIREAKLRVIAERVGLRRLHVLAPRL 126
R L RR ++P+ + L S++E + KLRVI R+ R + +++P +
Sbjct: 250 RALKQLRRTIVPQTRPVSNLNNPFLPHKSNKETTKPNSPKLRVI-RRIDRRTMMMVSPHM 308
Query: 127 R 127
R
Sbjct: 309 R 309
>At4g09570.1 68417.m01575 calcium-dependent protein kinase, putative
/ CDPK, putative similar to calcium-dependent protein
kinase [Arabidopsis thaliana] gi|604881|dbj|BAA04830;
contains protein kinase domain, Pfam:PF00069; contains
EF hand domain (calcium-binding EF-hand), Pfam:PF00036,
INTERPRO:IPR002048
Length = 501
Score = 27.5 bits (58), Expect = 4.3
Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 6/69 (8%)
Query: 78 PRELTLIELLKQSSGVNSDEEVLRIREAKLRVIAERVGLRRLHVLAPRLRSLILDGSALS 137
P + ++ LKQ S +N +I++ LRVIAER+ + L + + D S
Sbjct: 293 PLDPAVLSRLKQFSQMN------KIKKMALRVIAERLSEEEIGGLKELFKMIDTDNSGTI 346
Query: 138 SLRDLGIGL 146
+ +L GL
Sbjct: 347 TFEELKAGL 355
>At2g41860.2 68415.m05174 calcium-dependent protein kinase, putative
/ CDPK, putative similar to calmodulin-domain protein
kinase CDPK isoform 7 [Arabidopsis thaliana]
gi|1399277|gb|AAB03247
Length = 530
Score = 27.5 bits (58), Expect = 4.3
Identities = 14/53 (26%), Positives = 27/53 (50%)
Query: 101 RIREAKLRVIAERVGLRRLHVLAPRLRSLILDGSALSSLRDLGIGLVHLKVDV 153
++++ LRVIAE + + + R + + ++ +LGIGL L + V
Sbjct: 339 KLKKRALRVIAEHLSVEETSCIKERFQVMDTSNRGKITITELGIGLQKLGIVV 391
>At2g41860.1 68415.m05173 calcium-dependent protein kinase, putative
/ CDPK, putative similar to calmodulin-domain protein
kinase CDPK isoform 7 [Arabidopsis thaliana]
gi|1399277|gb|AAB03247
Length = 425
Score = 27.5 bits (58), Expect = 4.3
Identities = 14/53 (26%), Positives = 27/53 (50%)
Query: 101 RIREAKLRVIAERVGLRRLHVLAPRLRSLILDGSALSSLRDLGIGLVHLKVDV 153
++++ LRVIAE + + + R + + ++ +LGIGL L + V
Sbjct: 234 KLKKRALRVIAEHLSVEETSCIKERFQVMDTSNRGKITITELGIGLQKLGIVV 286
>At1g35670.1 68414.m04435 calcium-dependent protein kinase 2 (CDPK2)
identical to calcium-dependent protein kinase
[Arabidopsis thaliana] gi|604881|dbj|BAA04830; contains
protein kinase domain, Pfam:PF00069; contains EF hand
domain (calcium-binding EF-hand), Pfam:PF00036,
INTERPRO:IPR002048
Length = 495
Score = 27.5 bits (58), Expect = 4.3
Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 6/69 (8%)
Query: 78 PRELTLIELLKQSSGVNSDEEVLRIREAKLRVIAERVGLRRLHVLAPRLRSLILDGSALS 137
P + ++ LKQ S +N +I++ LRVIAER+ + L + + D S
Sbjct: 294 PLDPAVLSRLKQFSQMN------KIKKMALRVIAERLSEEEIGGLKELFKMIDTDNSGTI 347
Query: 138 SLRDLGIGL 146
+ +L GL
Sbjct: 348 TFEELKAGL 356
>At2g35890.1 68415.m04406 calcium-dependent protein kinase, putative
/ CDPK, putative similar to calcium-dependent protein
kinase, isoform AK1 (CDPK). [Arabidopsis thaliana]
SWISS-PROT:Q06850; contains protein kinase domain,
Pfam:PF00069; contains EF hand domain (calcium-binding
EF-hand), Pfam:PF00036, INTERPRO:IPR002048
Length = 520
Score = 27.1 bits (57), Expect = 5.6
Identities = 18/69 (26%), Positives = 35/69 (50%), Gaps = 6/69 (8%)
Query: 78 PRELTLIELLKQSSGVNSDEEVLRIREAKLRVIAERVGLRRLHVLAPRLRSLILDGSALS 137
P + T++ LK+ S + ++++ LRVIAER+ +H L +++ S
Sbjct: 400 PLDTTVLSRLKKFSATD------KLKKMALRVIAERLSEEEIHELRETFKTIDSGKSGRV 453
Query: 138 SLRDLGIGL 146
+ ++L GL
Sbjct: 454 TYKELKNGL 462
>At1g27180.1 68414.m03311 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1556
Score = 26.6 bits (56), Expect = 7.4
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 6/58 (10%)
Query: 82 TLIELLKQSSGVNSDEEVLRIREAKLRVIAERVGLRRLHVLAPRLRSLILDGSALSSL 139
+L E L SG+ E+ + L V+ E +G P L+ L+LDG+A+S+L
Sbjct: 902 SLSEFLGDVSGLKCLEKFFLSGCSNLSVLPENIGSM------PCLKELLLDGTAISNL 953
>At4g19510.2 68417.m02870 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1049
Score = 26.2 bits (55), Expect = 9.8
Identities = 11/50 (22%), Positives = 29/50 (58%)
Query: 87 LKQSSGVNSDEEVLRIREAKLRVIAERVGLRRLHVLAPRLRSLILDGSAL 136
L+ + + S + +I+ K +++ + L+ H+++ + SL L+G+A+
Sbjct: 684 LRDCTSLESLPKGFKIKSLKTLILSGCLKLKDFHIISESIESLHLEGTAI 733
>At4g19510.1 68417.m02869 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1049
Score = 26.2 bits (55), Expect = 9.8
Identities = 11/50 (22%), Positives = 29/50 (58%)
Query: 87 LKQSSGVNSDEEVLRIREAKLRVIAERVGLRRLHVLAPRLRSLILDGSAL 136
L+ + + S + +I+ K +++ + L+ H+++ + SL L+G+A+
Sbjct: 684 LRDCTSLESLPKGFKIKSLKTLILSGCLKLKDFHIISESIESLHLEGTAI 733
>At4g09120.1 68417.m01505 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 345
Score = 26.2 bits (55), Expect = 9.8
Identities = 15/51 (29%), Positives = 24/51 (47%)
Query: 75 IVIPRELTLIELLKQSSGVNSDEEVLRIREAKLRVIAERVGLRRLHVLAPR 125
I +PR + L Q G N D L++ E R + +RR H++ P+
Sbjct: 220 IFVPRSHSTGHSLVQQLGENLDRFTLQLPEEVQRQLVSLNLIRRSHIVLPQ 270
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.325 0.142 0.389
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,179,319
Number of Sequences: 28952
Number of extensions: 62637
Number of successful extensions: 261
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 256
Number of HSP's gapped (non-prelim): 12
length of query: 154
length of database: 12,070,560
effective HSP length: 75
effective length of query: 79
effective length of database: 9,899,160
effective search space: 782033640
effective search space used: 782033640
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 55 (26.2 bits)
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