Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001015-TA|BGIBMGA001015-PA|IPR006662|Thioredoxin-related
(183 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC075810-1|AAH75810.1| 298|Homo sapiens chromosome 6 open readi... 101 2e-21
BC010184-1|AAH10184.1| 298|Homo sapiens chromosome 6 open readi... 101 2e-21
BC002328-1|AAH02328.1| 298|Homo sapiens chromosome 6 open readi... 101 2e-21
AL451165-2|CAH70507.1| 298|Homo sapiens RP3-391O22.4 protein. 101 2e-21
AL031577-3|CAI20393.1| 298|Homo sapiens RP3-391O22.4 protein. 101 2e-21
X76952-1|CAA54274.1| 966|Homo sapiens IAI3B protein. 64 4e-10
D30756-1|BAA06417.2| 969|Homo sapiens KIAA0049 protein. 64 4e-10
DQ478408-1|ABF14461.1| 583|Homo sapiens neighbor of BRCA1 gene ... 64 4e-10
DQ190457-1|ABA29231.1| 558|Homo sapiens neighbor of BRCA1 gene ... 64 4e-10
DQ190456-1|ABA29228.1| 558|Homo sapiens neighbor of BRCA1 gene ... 64 4e-10
DQ190455-1|ABA29225.1| 583|Homo sapiens neighbor of BRCA1 gene ... 64 4e-10
DQ190453-1|ABA29219.1| 583|Homo sapiens neighbor of BRCA1 gene ... 64 4e-10
DQ190450-1|ABA29210.1| 553|Homo sapiens neighbor of BRCA1 gene ... 64 4e-10
BC009808-1|AAH09808.1| 937|Homo sapiens NBR1 protein protein. 64 4e-10
AY450308-1|AAS15047.1| 966|Homo sapiens migration-inducing prot... 64 4e-10
AL451165-1|CAH70508.1| 232|Homo sapiens RP3-391O22.4 protein. 62 1e-09
AL031577-2|CAI20394.1| 232|Homo sapiens RP3-391O22.4 protein. 62 1e-09
DQ190451-1|ABA29213.1| 502|Homo sapiens neighbor of BRCA1 gene ... 60 4e-09
AK056964-1|BAB71327.1| 232|Homo sapiens protein ( Homo sapiens ... 60 6e-09
DQ190452-1|ABA29216.1| 478|Homo sapiens neighbor of BRCA1 gene ... 59 8e-09
AL031577-4|CAI20395.1| 224|Homo sapiens RP3-391O22.4 protein. 58 2e-08
U25764-1|AAA93228.1| 97|Homo sapiens IAI3B protein. 44 4e-04
BC110498-1|AAI10499.1| 505|Homo sapiens NELF protein protein. 32 1.0
BC072412-1|AAH72412.1| 528|Homo sapiens nasal embryonic LHRH fa... 32 1.0
AY255132-1|AAP83580.1| 402|Homo sapiens nasal embryonic LHRH fa... 32 1.0
AY255131-1|AAP83579.1| 500|Homo sapiens nasal embryonic LHRH fa... 32 1.0
AY255130-1|AAP83578.1| 507|Homo sapiens nasal embryonic LHRH fa... 32 1.0
AY255129-1|AAP83577.1| 528|Homo sapiens nasal embryonic LHRH fa... 32 1.0
AY255128-1|AAP83576.1| 530|Homo sapiens nasal embryonic LHRH fa... 32 1.0
AL365502-4|CAI14578.1| 528|Homo sapiens nasal embryonic LHRH fa... 32 1.0
AK074602-1|BAC11086.1| 528|Homo sapiens protein ( Homo sapiens ... 32 1.0
AF414442-1|AAL65133.2|22152|Homo sapiens ovarian cancer related ... 29 7.1
>BC075810-1|AAH75810.1| 298|Homo sapiens chromosome 6 open reading
frame 106 protein.
Length = 298
Score = 101 bits (241), Expect = 2e-21
Identities = 60/163 (36%), Positives = 90/163 (55%), Gaps = 7/163 (4%)
Query: 2 QKLLGPSLNYNTASFFLDMSNWNLQAAICCYLDYTSPKL--PSMSV--KASEGPTGSLEP 57
Q+LLG LN +FFLDM+NWNLQAAI Y D+ SP + PSMS + G S+ P
Sbjct: 32 QRLLGFQLNPAGCAFFLDMTNWNLQAAIGAYYDFESPNISVPSMSFVEDVTIGEGESIPP 91
Query: 58 GARFDQNWSIVNTGTEQW-PGCCRLIQAGGEPLG-ATPVYLPPLPVGHSTTVTLKLVAPS 115
+F + W I N+G E W PG C L GG+ G V + L V++++ +PS
Sbjct: 92 DTQFVKTWRIQNSGAEAWPPGVC-LKYVGGDQFGHVNMVMVRSLEPQEIADVSVQMCSPS 150
Query: 116 TSGTHKSFFHLVTDKGEQIGDTLWVEVTVESEMTMALVEQLAA 158
+G ++ + + T G GD +WV ++VE + + +QL++
Sbjct: 151 RAGMYQGQWRMCTATGLYYGDVIWVILSVEVGGLLGVTQQLSS 193
>BC010184-1|AAH10184.1| 298|Homo sapiens chromosome 6 open reading
frame 106 protein.
Length = 298
Score = 101 bits (241), Expect = 2e-21
Identities = 60/163 (36%), Positives = 90/163 (55%), Gaps = 7/163 (4%)
Query: 2 QKLLGPSLNYNTASFFLDMSNWNLQAAICCYLDYTSPKL--PSMSV--KASEGPTGSLEP 57
Q+LLG LN +FFLDM+NWNLQAAI Y D+ SP + PSMS + G S+ P
Sbjct: 32 QRLLGFQLNPAGCAFFLDMTNWNLQAAIGAYYDFESPNISVPSMSFVEDVTIGEGESIPP 91
Query: 58 GARFDQNWSIVNTGTEQW-PGCCRLIQAGGEPLG-ATPVYLPPLPVGHSTTVTLKLVAPS 115
+F + W I N+G E W PG C L GG+ G V + L V++++ +PS
Sbjct: 92 DTQFVKTWRIQNSGAEAWPPGVC-LKYVGGDQFGHVNMVMVRSLEPQEIADVSVQMCSPS 150
Query: 116 TSGTHKSFFHLVTDKGEQIGDTLWVEVTVESEMTMALVEQLAA 158
+G ++ + + T G GD +WV ++VE + + +QL++
Sbjct: 151 RAGMYQGQWRMCTATGLYYGDVIWVILSVEVGGLLGVTQQLSS 193
>BC002328-1|AAH02328.1| 298|Homo sapiens chromosome 6 open reading
frame 106 protein.
Length = 298
Score = 101 bits (241), Expect = 2e-21
Identities = 60/163 (36%), Positives = 90/163 (55%), Gaps = 7/163 (4%)
Query: 2 QKLLGPSLNYNTASFFLDMSNWNLQAAICCYLDYTSPKL--PSMSV--KASEGPTGSLEP 57
Q+LLG LN +FFLDM+NWNLQAAI Y D+ SP + PSMS + G S+ P
Sbjct: 32 QRLLGFQLNPAGCAFFLDMTNWNLQAAIGAYYDFESPNISVPSMSFVEDVTIGEGESIPP 91
Query: 58 GARFDQNWSIVNTGTEQW-PGCCRLIQAGGEPLG-ATPVYLPPLPVGHSTTVTLKLVAPS 115
+F + W I N+G E W PG C L GG+ G V + L V++++ +PS
Sbjct: 92 DTQFVKTWRIQNSGAEAWPPGVC-LKYVGGDQFGHVNMVMVRSLEPQEIADVSVQMCSPS 150
Query: 116 TSGTHKSFFHLVTDKGEQIGDTLWVEVTVESEMTMALVEQLAA 158
+G ++ + + T G GD +WV ++VE + + +QL++
Sbjct: 151 RAGMYQGQWRMCTATGLYYGDVIWVILSVEVGGLLGVTQQLSS 193
>AL451165-2|CAH70507.1| 298|Homo sapiens RP3-391O22.4 protein.
Length = 298
Score = 101 bits (241), Expect = 2e-21
Identities = 60/163 (36%), Positives = 90/163 (55%), Gaps = 7/163 (4%)
Query: 2 QKLLGPSLNYNTASFFLDMSNWNLQAAICCYLDYTSPKL--PSMSV--KASEGPTGSLEP 57
Q+LLG LN +FFLDM+NWNLQAAI Y D+ SP + PSMS + G S+ P
Sbjct: 32 QRLLGFQLNPAGCAFFLDMTNWNLQAAIGAYYDFESPNISVPSMSFVEDVTIGEGESIPP 91
Query: 58 GARFDQNWSIVNTGTEQW-PGCCRLIQAGGEPLG-ATPVYLPPLPVGHSTTVTLKLVAPS 115
+F + W I N+G E W PG C L GG+ G V + L V++++ +PS
Sbjct: 92 DTQFVKTWRIQNSGAEAWPPGVC-LKYVGGDQFGHVNMVMVRSLEPQEIADVSVQMCSPS 150
Query: 116 TSGTHKSFFHLVTDKGEQIGDTLWVEVTVESEMTMALVEQLAA 158
+G ++ + + T G GD +WV ++VE + + +QL++
Sbjct: 151 RAGMYQGQWRMCTATGLYYGDVIWVILSVEVGGLLGVTQQLSS 193
>AL031577-3|CAI20393.1| 298|Homo sapiens RP3-391O22.4 protein.
Length = 298
Score = 101 bits (241), Expect = 2e-21
Identities = 60/163 (36%), Positives = 90/163 (55%), Gaps = 7/163 (4%)
Query: 2 QKLLGPSLNYNTASFFLDMSNWNLQAAICCYLDYTSPKL--PSMSV--KASEGPTGSLEP 57
Q+LLG LN +FFLDM+NWNLQAAI Y D+ SP + PSMS + G S+ P
Sbjct: 32 QRLLGFQLNPAGCAFFLDMTNWNLQAAIGAYYDFESPNISVPSMSFVEDVTIGEGESIPP 91
Query: 58 GARFDQNWSIVNTGTEQW-PGCCRLIQAGGEPLG-ATPVYLPPLPVGHSTTVTLKLVAPS 115
+F + W I N+G E W PG C L GG+ G V + L V++++ +PS
Sbjct: 92 DTQFVKTWRIQNSGAEAWPPGVC-LKYVGGDQFGHVNMVMVRSLEPQEIADVSVQMCSPS 150
Query: 116 TSGTHKSFFHLVTDKGEQIGDTLWVEVTVESEMTMALVEQLAA 158
+G ++ + + T G GD +WV ++VE + + +QL++
Sbjct: 151 RAGMYQGQWRMCTATGLYYGDVIWVILSVEVGGLLGVTQQLSS 193
>X76952-1|CAA54274.1| 966|Homo sapiens IAI3B protein.
Length = 966
Score = 63.7 bits (148), Expect = 4e-10
Identities = 39/136 (28%), Positives = 72/136 (52%), Gaps = 8/136 (5%)
Query: 51 PTGS-LEPGARFDQNWSIVNTGTEQWPGCCRL-IQAGGEPLGAT---PVYLPPLPVGHST 105
P G+ L+PG +F ++W + NTG +W +L G L +T V +P L GH
Sbjct: 381 PDGTHLQPGTKFIKHWRMKNTGNVKWSADTKLKFMWGNLTLASTEKKDVLVPCLKAGHVG 440
Query: 106 TVTLKLVAPSTSGTHKSFFHLVTDKGEQIGDTLWVEVTVESEMTMALVEQLAALPVPSSR 165
V+++ +AP+ GT+ S + L + KG+Q G +W + V+ + + + + SS+
Sbjct: 441 VVSVEFIAPALEGTYTSHWRL-SHKGQQFGPRVWCSIIVDPFPSEESPDNIEKGMISSSK 499
Query: 166 LEELLTQVKDIPTFMI 181
++L Q ++ TF++
Sbjct: 500 TDDLTCQQEE--TFLL 513
>D30756-1|BAA06417.2| 969|Homo sapiens KIAA0049 protein.
Length = 969
Score = 63.7 bits (148), Expect = 4e-10
Identities = 39/136 (28%), Positives = 72/136 (52%), Gaps = 8/136 (5%)
Query: 51 PTGS-LEPGARFDQNWSIVNTGTEQWPGCCRL-IQAGGEPLGAT---PVYLPPLPVGHST 105
P G+ L+PG +F ++W + NTG +W +L G L +T V +P L GH
Sbjct: 384 PDGTHLQPGTKFIKHWRMKNTGNVKWSADTKLKFMWGNLTLASTEKKDVLVPCLKAGHVG 443
Query: 106 TVTLKLVAPSTSGTHKSFFHLVTDKGEQIGDTLWVEVTVESEMTMALVEQLAALPVPSSR 165
V+++ +AP+ GT+ S + L + KG+Q G +W + V+ + + + + SS+
Sbjct: 444 VVSVEFIAPALEGTYTSHWRL-SHKGQQFGPRVWCSIIVDPFPSEESPDNIEKGMISSSK 502
Query: 166 LEELLTQVKDIPTFMI 181
++L Q ++ TF++
Sbjct: 503 TDDLTCQQEE--TFLL 516
>DQ478408-1|ABF14461.1| 583|Homo sapiens neighbor of BRCA1 gene 1
protein.
Length = 583
Score = 63.7 bits (148), Expect = 4e-10
Identities = 39/136 (28%), Positives = 72/136 (52%), Gaps = 8/136 (5%)
Query: 51 PTGS-LEPGARFDQNWSIVNTGTEQWPGCCRL-IQAGGEPLGAT---PVYLPPLPVGHST 105
P G+ L+PG +F ++W + NTG +W +L G L +T V +P L GH
Sbjct: 381 PDGTHLQPGTKFIKHWRMKNTGNVKWSADTKLKFMWGNLTLASTEKKDVLVPCLKAGHVG 440
Query: 106 TVTLKLVAPSTSGTHKSFFHLVTDKGEQIGDTLWVEVTVESEMTMALVEQLAALPVPSSR 165
V+++ +AP+ GT+ S + L + KG+Q G +W + V+ + + + + SS+
Sbjct: 441 VVSVEFIAPALEGTYTSHWRL-SHKGQQFGPRVWCSIIVDPFPSEESPDNIEKGMISSSK 499
Query: 166 LEELLTQVKDIPTFMI 181
++L Q ++ TF++
Sbjct: 500 TDDLTCQQEE--TFLL 513
>DQ190457-1|ABA29231.1| 558|Homo sapiens neighbor of BRCA1 gene 1
protein.
Length = 558
Score = 63.7 bits (148), Expect = 4e-10
Identities = 39/136 (28%), Positives = 72/136 (52%), Gaps = 8/136 (5%)
Query: 51 PTGS-LEPGARFDQNWSIVNTGTEQWPGCCRL-IQAGGEPLGAT---PVYLPPLPVGHST 105
P G+ L+PG +F ++W + NTG +W +L G L +T V +P L GH
Sbjct: 381 PDGTHLQPGTKFIKHWRMKNTGNVKWSADTKLKFMWGNLTLASTEKKDVLVPCLKAGHVG 440
Query: 106 TVTLKLVAPSTSGTHKSFFHLVTDKGEQIGDTLWVEVTVESEMTMALVEQLAALPVPSSR 165
V+++ +AP+ GT+ S + L + KG+Q G +W + V+ + + + + SS+
Sbjct: 441 VVSVEFIAPALEGTYTSHWRL-SHKGQQFGPRVWCSIIVDPFPSEESPDNIEKGMISSSK 499
Query: 166 LEELLTQVKDIPTFMI 181
++L Q ++ TF++
Sbjct: 500 TDDLTCQQEE--TFLL 513
>DQ190456-1|ABA29228.1| 558|Homo sapiens neighbor of BRCA1 gene 1
protein.
Length = 558
Score = 63.7 bits (148), Expect = 4e-10
Identities = 39/136 (28%), Positives = 72/136 (52%), Gaps = 8/136 (5%)
Query: 51 PTGS-LEPGARFDQNWSIVNTGTEQWPGCCRL-IQAGGEPLGAT---PVYLPPLPVGHST 105
P G+ L+PG +F ++W + NTG +W +L G L +T V +P L GH
Sbjct: 381 PDGTHLQPGTKFIKHWRMKNTGNVKWSADTKLKFMWGNLTLASTEKKDVLVPCLKAGHVG 440
Query: 106 TVTLKLVAPSTSGTHKSFFHLVTDKGEQIGDTLWVEVTVESEMTMALVEQLAALPVPSSR 165
V+++ +AP+ GT+ S + L + KG+Q G +W + V+ + + + + SS+
Sbjct: 441 VVSVEFIAPALEGTYTSHWRL-SHKGQQFGPRVWCSIIVDPFPSEESPDNIEKGMISSSK 499
Query: 166 LEELLTQVKDIPTFMI 181
++L Q ++ TF++
Sbjct: 500 TDDLTCQQEE--TFLL 513
>DQ190455-1|ABA29225.1| 583|Homo sapiens neighbor of BRCA1 gene 1
protein.
Length = 583
Score = 63.7 bits (148), Expect = 4e-10
Identities = 39/136 (28%), Positives = 72/136 (52%), Gaps = 8/136 (5%)
Query: 51 PTGS-LEPGARFDQNWSIVNTGTEQWPGCCRL-IQAGGEPLGAT---PVYLPPLPVGHST 105
P G+ L+PG +F ++W + NTG +W +L G L +T V +P L GH
Sbjct: 381 PDGTHLQPGTKFIKHWRMKNTGNVKWSADTKLKFMWGNLTLASTEKKDVLVPCLKAGHVG 440
Query: 106 TVTLKLVAPSTSGTHKSFFHLVTDKGEQIGDTLWVEVTVESEMTMALVEQLAALPVPSSR 165
V+++ +AP+ GT+ S + L + KG+Q G +W + V+ + + + + SS+
Sbjct: 441 VVSVEFIAPALEGTYTSHWRL-SHKGQQFGPRVWCSIIVDPFPSEESPDNIEKGMISSSK 499
Query: 166 LEELLTQVKDIPTFMI 181
++L Q ++ TF++
Sbjct: 500 TDDLTCQQEE--TFLL 513
>DQ190453-1|ABA29219.1| 583|Homo sapiens neighbor of BRCA1 gene 1
protein.
Length = 583
Score = 63.7 bits (148), Expect = 4e-10
Identities = 39/136 (28%), Positives = 72/136 (52%), Gaps = 8/136 (5%)
Query: 51 PTGS-LEPGARFDQNWSIVNTGTEQWPGCCRL-IQAGGEPLGAT---PVYLPPLPVGHST 105
P G+ L+PG +F ++W + NTG +W +L G L +T V +P L GH
Sbjct: 381 PDGTHLQPGTKFIKHWRMKNTGNVKWSADTKLKFMWGNLTLASTEKKDVLVPCLKAGHVG 440
Query: 106 TVTLKLVAPSTSGTHKSFFHLVTDKGEQIGDTLWVEVTVESEMTMALVEQLAALPVPSSR 165
V+++ +AP+ GT+ S + L + KG+Q G +W + V+ + + + + SS+
Sbjct: 441 VVSVEFIAPALEGTYTSHWRL-SHKGQQFGPRVWCSIIVDPFPSEESPDNIEKGMISSSK 499
Query: 166 LEELLTQVKDIPTFMI 181
++L Q ++ TF++
Sbjct: 500 TDDLTCQQEE--TFLL 513
>DQ190450-1|ABA29210.1| 553|Homo sapiens neighbor of BRCA1 gene 1
protein.
Length = 553
Score = 63.7 bits (148), Expect = 4e-10
Identities = 39/136 (28%), Positives = 72/136 (52%), Gaps = 8/136 (5%)
Query: 51 PTGS-LEPGARFDQNWSIVNTGTEQWPGCCRL-IQAGGEPLGAT---PVYLPPLPVGHST 105
P G+ L+PG +F ++W + NTG +W +L G L +T V +P L GH
Sbjct: 381 PDGTHLQPGTKFIKHWRMKNTGNVKWSADTKLKFMWGNLTLASTEKKDVLVPCLKAGHVG 440
Query: 106 TVTLKLVAPSTSGTHKSFFHLVTDKGEQIGDTLWVEVTVESEMTMALVEQLAALPVPSSR 165
V+++ +AP+ GT+ S + L + KG+Q G +W + V+ + + + + SS+
Sbjct: 441 VVSVEFIAPALEGTYTSHWRL-SHKGQQFGPRVWCSIIVDPFPSEESPDNIEKGMISSSK 499
Query: 166 LEELLTQVKDIPTFMI 181
++L Q ++ TF++
Sbjct: 500 TDDLTCQQEE--TFLL 513
>BC009808-1|AAH09808.1| 937|Homo sapiens NBR1 protein protein.
Length = 937
Score = 63.7 bits (148), Expect = 4e-10
Identities = 39/136 (28%), Positives = 72/136 (52%), Gaps = 8/136 (5%)
Query: 51 PTGS-LEPGARFDQNWSIVNTGTEQWPGCCRL-IQAGGEPLGAT---PVYLPPLPVGHST 105
P G+ L+PG +F ++W + NTG +W +L G L +T V +P L GH
Sbjct: 381 PDGTHLQPGTKFIKHWRMKNTGNVKWSADTKLKFMWGNLTLASTEKKDVLVPCLKAGHVG 440
Query: 106 TVTLKLVAPSTSGTHKSFFHLVTDKGEQIGDTLWVEVTVESEMTMALVEQLAALPVPSSR 165
V+++ +AP+ GT+ S + L + KG+Q G +W + V+ + + + + SS+
Sbjct: 441 VVSVEFIAPALEGTYTSHWRL-SHKGQQFGPRVWCSIIVDPFPSEESPDNIEKGMISSSK 499
Query: 166 LEELLTQVKDIPTFMI 181
++L Q ++ TF++
Sbjct: 500 TDDLTCQQEE--TFLL 513
>AY450308-1|AAS15047.1| 966|Homo sapiens migration-inducing protein
19 protein.
Length = 966
Score = 63.7 bits (148), Expect = 4e-10
Identities = 39/136 (28%), Positives = 72/136 (52%), Gaps = 8/136 (5%)
Query: 51 PTGS-LEPGARFDQNWSIVNTGTEQWPGCCRL-IQAGGEPLGAT---PVYLPPLPVGHST 105
P G+ L+PG +F ++W + NTG +W +L G L +T V +P L GH
Sbjct: 381 PDGTHLQPGTKFIKHWRMKNTGNVKWSADTKLKFMWGNLTLASTEKKDVLVPCLKAGHVG 440
Query: 106 TVTLKLVAPSTSGTHKSFFHLVTDKGEQIGDTLWVEVTVESEMTMALVEQLAALPVPSSR 165
V+++ +AP+ GT+ S + L + KG+Q G +W + V+ + + + + SS+
Sbjct: 441 VVSVEFIAPALEGTYTSHWRL-SHKGQQFGPRVWCSIIVDPFPSEESPDNIEKGMISSSK 499
Query: 166 LEELLTQVKDIPTFMI 181
++L Q ++ TF++
Sbjct: 500 TDDLTCQQEE--TFLL 513
>AL451165-1|CAH70508.1| 232|Homo sapiens RP3-391O22.4 protein.
Length = 232
Score = 61.7 bits (143), Expect = 1e-09
Identities = 34/73 (46%), Positives = 44/73 (60%), Gaps = 4/73 (5%)
Query: 2 QKLLGPSLNYNTASFFLDMSNWNLQAAICCYLDYTSPKL--PSMSV--KASEGPTGSLEP 57
Q+LLG LN +FFLDM+NWNLQAAI Y D+ SP + PSMS + G S+ P
Sbjct: 32 QRLLGFQLNPAGCAFFLDMTNWNLQAAIGAYYDFESPNISVPSMSFVEDVTIGEGESIPP 91
Query: 58 GARFDQNWSIVNT 70
+F + W I N+
Sbjct: 92 DTQFVKTWRIQNS 104
>AL031577-2|CAI20394.1| 232|Homo sapiens RP3-391O22.4 protein.
Length = 232
Score = 61.7 bits (143), Expect = 1e-09
Identities = 34/73 (46%), Positives = 44/73 (60%), Gaps = 4/73 (5%)
Query: 2 QKLLGPSLNYNTASFFLDMSNWNLQAAICCYLDYTSPKL--PSMSV--KASEGPTGSLEP 57
Q+LLG LN +FFLDM+NWNLQAAI Y D+ SP + PSMS + G S+ P
Sbjct: 32 QRLLGFQLNPAGCAFFLDMTNWNLQAAIGAYYDFESPNISVPSMSFVEDVTIGEGESIPP 91
Query: 58 GARFDQNWSIVNT 70
+F + W I N+
Sbjct: 92 DTQFVKTWRIQNS 104
>DQ190451-1|ABA29213.1| 502|Homo sapiens neighbor of BRCA1 gene 1
protein.
Length = 502
Score = 60.1 bits (139), Expect = 4e-09
Identities = 33/100 (33%), Positives = 55/100 (55%), Gaps = 6/100 (6%)
Query: 51 PTGS-LEPGARFDQNWSIVNTGTEQWPGCCRL-IQAGGEPLGAT---PVYLPPLPVGHST 105
P G+ L+PG +F ++W + NTG +W +L G L +T V +P L GH
Sbjct: 381 PDGTHLQPGTKFIKHWRMKNTGNVKWSADTKLKFMWGNLTLASTEKKDVLVPCLKAGHVG 440
Query: 106 TVTLKLVAPSTSGTHKSFFHLVTDKGEQIGDTLWVEVTVE 145
V+++ +AP+ GT+ S + L + KG+Q G +W + V+
Sbjct: 441 VVSVEFIAPALEGTYTSHWRL-SHKGQQFGPRVWCSIIVD 479
>AK056964-1|BAB71327.1| 232|Homo sapiens protein ( Homo sapiens
cDNA FLJ32402 fis, clone SKMUS2000343. ).
Length = 232
Score = 59.7 bits (138), Expect = 6e-09
Identities = 33/73 (45%), Positives = 44/73 (60%), Gaps = 4/73 (5%)
Query: 2 QKLLGPSLNYNTASFFLDMSNWNLQAAICCYLDYTSPKL--PSMSV--KASEGPTGSLEP 57
Q+LLG LN +FFLDM+NW+LQAAI Y D+ SP + PSMS + G S+ P
Sbjct: 32 QRLLGFQLNPAGCAFFLDMTNWSLQAAIGAYYDFESPNISVPSMSFVEDVTIGEGESIPP 91
Query: 58 GARFDQNWSIVNT 70
+F + W I N+
Sbjct: 92 DTQFVKTWRIQNS 104
>DQ190452-1|ABA29216.1| 478|Homo sapiens neighbor of BRCA1 gene 1
protein.
Length = 478
Score = 59.3 bits (137), Expect = 8e-09
Identities = 33/99 (33%), Positives = 54/99 (54%), Gaps = 6/99 (6%)
Query: 51 PTGS-LEPGARFDQNWSIVNTGTEQWPGCCRL-IQAGGEPLGAT---PVYLPPLPVGHST 105
P G+ L+PG +F ++W + NTG +W +L G L +T V +P L GH
Sbjct: 381 PDGTHLQPGTKFIKHWRMKNTGNVKWSADTKLKFMWGNLTLASTEKKDVLVPCLKAGHVG 440
Query: 106 TVTLKLVAPSTSGTHKSFFHLVTDKGEQIGDTLWVEVTV 144
V+++ +AP+ GT+ S + L + KG+Q G +W + V
Sbjct: 441 VVSVEFIAPALEGTYTSHWRL-SHKGQQFGPRVWCSIIV 478
>AL031577-4|CAI20395.1| 224|Homo sapiens RP3-391O22.4 protein.
Length = 224
Score = 58.0 bits (134), Expect = 2e-08
Identities = 33/111 (29%), Positives = 57/111 (51%), Gaps = 3/111 (2%)
Query: 50 GPTGSLEPGARFDQNWSIVNTGTEQWP-GCCRLIQAGGEPLG-ATPVYLPPLPVGHSTTV 107
G S+ P +F + W I N+G E WP G C L GG+ G V + L V
Sbjct: 10 GEGESIPPDTQFVKTWRIQNSGAEAWPPGVC-LKYVGGDQFGHVNMVMVRSLEPQEIADV 68
Query: 108 TLKLVAPSTSGTHKSFFHLVTDKGEQIGDTLWVEVTVESEMTMALVEQLAA 158
++++ +PS +G ++ + + T G GD +WV ++VE + + +QL++
Sbjct: 69 SVQMCSPSRAGMYQGQWRMCTATGLYYGDVIWVILSVEVGGLLGVTQQLSS 119
>U25764-1|AAA93228.1| 97|Homo sapiens IAI3B protein.
Length = 97
Score = 43.6 bits (98), Expect = 4e-04
Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 94 VYLPPLPVGHSTTVTLKLVAPSTSGTHKSFFHLVTDKGEQIGDTLWVEVTVESEMTMALV 153
V +P L GH V+++ +AP+ GT+ S + L + KG+Q G +W + V+ +
Sbjct: 18 VLVPCLKAGHVGVVSVEFIAPALEGTYTSHWRL-SHKGQQFGPRVWCSIIVDPFPSEESP 76
Query: 154 EQLAALPVPSSRLEELLTQ 172
+ + + SS+ ++L Q
Sbjct: 77 DNIEKGMISSSKTDDLTCQ 95
>BC110498-1|AAI10499.1| 505|Homo sapiens NELF protein protein.
Length = 505
Score = 32.3 bits (70), Expect = 1.0
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
Query: 38 PKLPSMSVKASEGPTGSLEPGARFDQNWSIVNTGTEQWPGCCRLIQAGGEPLGATPVYLP 97
P S ++AS G GS E +R Q+W+ G+++ PGC +L A G A + P
Sbjct: 132 PHHHSQPLRASPG--GSREDVSRPCQSWAGSRQGSKECPGCAQL--APGPTPRAFGLDQP 187
Query: 98 PLP 100
PLP
Sbjct: 188 PLP 190
>BC072412-1|AAH72412.1| 528|Homo sapiens nasal embryonic LHRH
factor protein.
Length = 528
Score = 32.3 bits (70), Expect = 1.0
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
Query: 38 PKLPSMSVKASEGPTGSLEPGARFDQNWSIVNTGTEQWPGCCRLIQAGGEPLGATPVYLP 97
P S ++AS G GS E +R Q+W+ G+++ PGC +L A G A + P
Sbjct: 132 PHHHSQPLRASPG--GSREDVSRPCQSWAGSRQGSKECPGCAQL--APGPTPRAFGLDQP 187
Query: 98 PLP 100
PLP
Sbjct: 188 PLP 190
>AY255132-1|AAP83580.1| 402|Homo sapiens nasal embryonic LHRH
factor variant 4 protein.
Length = 402
Score = 32.3 bits (70), Expect = 1.0
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
Query: 38 PKLPSMSVKASEGPTGSLEPGARFDQNWSIVNTGTEQWPGCCRLIQAGGEPLGATPVYLP 97
P S ++AS G GS E +R Q+W+ G+++ PGC +L A G A + P
Sbjct: 132 PHHHSQPLRASPG--GSREDVSRPCQSWAGSRQGSKECPGCAQL--APGPTPRAFGLDQP 187
Query: 98 PLP 100
PLP
Sbjct: 188 PLP 190
>AY255131-1|AAP83579.1| 500|Homo sapiens nasal embryonic LHRH
factor variant 3 protein.
Length = 500
Score = 32.3 bits (70), Expect = 1.0
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
Query: 38 PKLPSMSVKASEGPTGSLEPGARFDQNWSIVNTGTEQWPGCCRLIQAGGEPLGATPVYLP 97
P S ++AS G GS E +R Q+W+ G+++ PGC +L A G A + P
Sbjct: 132 PHHHSQPLRASPG--GSREDVSRPCQSWAGSRQGSKECPGCAQL--APGPTPRAFGLDQP 187
Query: 98 PLP 100
PLP
Sbjct: 188 PLP 190
>AY255130-1|AAP83578.1| 507|Homo sapiens nasal embryonic LHRH
factor variant 2 protein.
Length = 507
Score = 32.3 bits (70), Expect = 1.0
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
Query: 38 PKLPSMSVKASEGPTGSLEPGARFDQNWSIVNTGTEQWPGCCRLIQAGGEPLGATPVYLP 97
P S ++AS G GS E +R Q+W+ G+++ PGC +L A G A + P
Sbjct: 132 PHHHSQPLRASPG--GSREDVSRPCQSWAGSRQGSKECPGCAQL--APGPTPRAFGLDQP 187
Query: 98 PLP 100
PLP
Sbjct: 188 PLP 190
>AY255129-1|AAP83577.1| 528|Homo sapiens nasal embryonic LHRH
factor variant 1 protein.
Length = 528
Score = 32.3 bits (70), Expect = 1.0
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
Query: 38 PKLPSMSVKASEGPTGSLEPGARFDQNWSIVNTGTEQWPGCCRLIQAGGEPLGATPVYLP 97
P S ++AS G GS E +R Q+W+ G+++ PGC +L A G A + P
Sbjct: 132 PHHHSQPLRASPG--GSREDVSRPCQSWAGSRQGSKECPGCAQL--APGPTPRAFGLDQP 187
Query: 98 PLP 100
PLP
Sbjct: 188 PLP 190
>AY255128-1|AAP83576.1| 530|Homo sapiens nasal embryonic LHRH
factor protein.
Length = 530
Score = 32.3 bits (70), Expect = 1.0
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
Query: 38 PKLPSMSVKASEGPTGSLEPGARFDQNWSIVNTGTEQWPGCCRLIQAGGEPLGATPVYLP 97
P S ++AS G GS E +R Q+W+ G+++ PGC +L A G A + P
Sbjct: 132 PHHHSQPLRASPG--GSREDVSRPCQSWAGSRQGSKECPGCAQL--APGPTPRAFGLDQP 187
Query: 98 PLP 100
PLP
Sbjct: 188 PLP 190
>AL365502-4|CAI14578.1| 528|Homo sapiens nasal embryonic LHRH
factor protein.
Length = 528
Score = 32.3 bits (70), Expect = 1.0
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
Query: 38 PKLPSMSVKASEGPTGSLEPGARFDQNWSIVNTGTEQWPGCCRLIQAGGEPLGATPVYLP 97
P S ++AS G GS E +R Q+W+ G+++ PGC +L A G A + P
Sbjct: 132 PHHHSQPLRASPG--GSREDVSRPCQSWAGSRQGSKECPGCAQL--APGPTPRAFGLDQP 187
Query: 98 PLP 100
PLP
Sbjct: 188 PLP 190
>AK074602-1|BAC11086.1| 528|Homo sapiens protein ( Homo sapiens
cDNA FLJ90121 fis, clone HEMBA1007057. ).
Length = 528
Score = 32.3 bits (70), Expect = 1.0
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
Query: 38 PKLPSMSVKASEGPTGSLEPGARFDQNWSIVNTGTEQWPGCCRLIQAGGEPLGATPVYLP 97
P S ++AS G GS E +R Q+W+ G+++ PGC +L A G A + P
Sbjct: 132 PHHHSQPLRASPG--GSREDVSRPCQSWAGSRQGSKECPGCAQL--APGPTPRAFGLDQP 187
Query: 98 PLP 100
PLP
Sbjct: 188 PLP 190
>AF414442-1|AAL65133.2|22152|Homo sapiens ovarian cancer related tumor
marker CA125 protein.
Length = 22152
Score = 29.5 bits (63), Expect = 7.1
Identities = 23/77 (29%), Positives = 31/77 (40%), Gaps = 1/77 (1%)
Query: 85 GGEPLGATPVYLPPLPVGHSTTVTLKLVAPSTS-GTHKSFFHLVTDKGEQIGDTLWVEVT 143
GG +G TP LPP + H + L+A S T + T GE + V +
Sbjct: 2439 GGSNVGGTPSTLPPFTITHPVETSSALLAWSRPVRTFSTMVSTDTASGENPTSSNSVVTS 2498
Query: 144 VESEMTMALVEQLAALP 160
V + T A V LP
Sbjct: 2499 VPAPGTWASVGSTTDLP 2515
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.316 0.132 0.406
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,510,822
Number of Sequences: 224733
Number of extensions: 1347091
Number of successful extensions: 2774
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 2714
Number of HSP's gapped (non-prelim): 35
length of query: 183
length of database: 73,234,838
effective HSP length: 86
effective length of query: 97
effective length of database: 53,907,800
effective search space: 5229056600
effective search space used: 5229056600
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 62 (29.1 bits)
- SilkBase 1999-2023 -