Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001014-TA|BGIBMGA001014-PA|IPR005178|Protein of unknown
function DUF300
(421 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_55171| Best HMM Match : DUF300 (HMM E-Value=4.1e-13) 64 2e-10
SB_13457| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.002
SB_35042| Best HMM Match : S-antigen (HMM E-Value=3) 35 0.14
SB_8599| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.33
SB_14171| Best HMM Match : Chitin_synth_2 (HMM E-Value=7.7e-07) 32 0.76
SB_52756| Best HMM Match : Albicidin_res (HMM E-Value=7.1) 31 1.3
SB_27401| Best HMM Match : SCP (HMM E-Value=9e-23) 30 3.1
SB_31032| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 4.1
SB_52465| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_36582| Best HMM Match : Pox_A32 (HMM E-Value=0.067) 29 5.4
SB_25448| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_14410| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_8782| Best HMM Match : CN_hydrolase (HMM E-Value=0) 29 5.4
SB_46861| Best HMM Match : Neuralized (HMM E-Value=8.5) 29 7.1
SB_9661| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.1
SB_53170| Best HMM Match : DUF705 (HMM E-Value=5.1) 29 7.1
SB_50497| Best HMM Match : CH (HMM E-Value=0.0084) 29 9.4
SB_18540| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 9.4
SB_15028| Best HMM Match : Drf_FH1 (HMM E-Value=0.84) 29 9.4
SB_5839| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 9.4
SB_3289| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 9.4
SB_2435| Best HMM Match : WD40 (HMM E-Value=4.1e-10) 29 9.4
SB_19195| Best HMM Match : LEA_4 (HMM E-Value=0.00053) 29 9.4
>SB_55171| Best HMM Match : DUF300 (HMM E-Value=4.1e-13)
Length = 254
Score = 64.5 bits (150), Expect = 2e-10
Identities = 29/70 (41%), Positives = 45/70 (64%)
Query: 214 YIIAINNLSQFVAMYCLVLFYKANRTELKPMKPIGKFLCIKAVVFFSFFQGVIITILVYC 273
YI + N+S +A+Y L LFY+A + L P P+ KF IK+V+F SF+QGV++ +
Sbjct: 8 YITIVYNISVSLALYALFLFYQATKDLLSPYYPVLKFFTIKSVIFLSFWQGVVLAVAEKA 67
Query: 274 GVLKTIFDIS 283
G+++T IS
Sbjct: 68 GLIRTYNHIS 77
>SB_13457| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 155
Score = 41.1 bits (92), Expect = 0.002
Identities = 16/40 (40%), Positives = 26/40 (65%)
Query: 296 QPYVSPLDASPSCLGSFLAMWDVSDVKRDISEHLGVVGSS 335
+PY+ P C S ++M DV+DV+ D++EH+ VGS+
Sbjct: 70 KPYLDTSSPPPPCCASLVSMCDVTDVRDDVAEHVRTVGST 109
>SB_35042| Best HMM Match : S-antigen (HMM E-Value=3)
Length = 165
Score = 34.7 bits (76), Expect = 0.14
Identities = 25/72 (34%), Positives = 33/72 (45%), Gaps = 6/72 (8%)
Query: 353 DESSRLMGEPVPSSSAPNLTTETETPSVEVRPSAYGSIENTVTNMSMTSETEPLLDASDK 412
D S EP S A + E+ETPSV V SA+G E++ N ++ D DK
Sbjct: 10 DSSENSNQEPTKSLDAKDKPNESETPSV-VEASAHGKQESSAENNDLSKAPSSDSDVKDK 68
Query: 413 -----SNDNENP 419
S+ ENP
Sbjct: 69 LDIVISSQVENP 80
>SB_8599| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 767
Score = 33.5 bits (73), Expect = 0.33
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Query: 352 YDESSRLMGEPVPSSSAPNLTTETETPSVEVRPSAYGSIENTVTNMSMTSETEP 405
Y ESS + G+P+PS+ P T TE P + PS+ + + S + ET P
Sbjct: 361 YMESSGVAGKPLPST--PKQRTSTEIPVITSAPSSQSAEKPERRTSSESKETRP 412
>SB_14171| Best HMM Match : Chitin_synth_2 (HMM E-Value=7.7e-07)
Length = 1188
Score = 32.3 bits (70), Expect = 0.76
Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 5/59 (8%)
Query: 361 EPVPSSSAPNLTTETETPSVEVRPSAYGSIENTVTNMSMTSETEPLLDASDKSNDNENP 419
EP P AP +T+ P PS Y ++ TN ++ E +P L SD S + P
Sbjct: 912 EPNPDPQAPATNNQTDNP-----PSQYEDSSSSETNGVLSDEEQPPLPLSDSSIQSAAP 965
>SB_52756| Best HMM Match : Albicidin_res (HMM E-Value=7.1)
Length = 246
Score = 31.5 bits (68), Expect = 1.3
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
Query: 349 TRGYDESSRLMGEPVPSSSAPNL-TTETETPSVEVRPSAYGSIENTVTN--MSMTSETEP 405
T G+ + S GEP P S P + +E P V+ RP +Y ++ + S+ SE +
Sbjct: 44 TLGFVKKSEGFGEPSPQCSTPPIERRSSERPYVKQRPLSYRFSPESLRDGKGSLLSEWKG 103
Query: 406 LLDASDKSNDNENPQ 420
+ S+K+ N+ +
Sbjct: 104 RVSKSEKNETNKTAE 118
>SB_27401| Best HMM Match : SCP (HMM E-Value=9e-23)
Length = 1105
Score = 30.3 bits (65), Expect = 3.1
Identities = 20/72 (27%), Positives = 29/72 (40%), Gaps = 1/72 (1%)
Query: 349 TRGYDESSRLMGEPVPSSSAPNLTTETETPSVEVRPSAYGSIENTVTNMSMT-SETEPLL 407
T G +S + ++ A NLTTE TP V P+ + + T T T + T P +
Sbjct: 458 TSGDKTTSAIKPTTPTTTEASNLTTELMTPEVTTTPTIESTTQTTPTTGPATGNTTTPTI 517
Query: 408 DASDKSNDNENP 419
N P
Sbjct: 518 QPIAADNSTSPP 529
>SB_31032| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1008
Score = 29.9 bits (64), Expect = 4.1
Identities = 20/84 (23%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Query: 65 ISIWQITQHIVHYTKPSLQKHIIRILWMVPIYALNALIGLEFPEQSIYLDSLRECYEAYV 124
IS+W ITQ + TKP + +++ P A I ++ + + + ++E +A
Sbjct: 533 ISLWVITQQLTSITKPFRENIAALVVFYTPSKADMKAILHDYGAE-LLEEKMKEYMKALK 591
Query: 125 IYNFMKYLLNYLNDGHDLEAVLET 148
F K+ ++ HD LE+
Sbjct: 592 TKKFSKFSKSFACPRHDERRYLES 615
>SB_52465| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 252
Score = 29.5 bits (63), Expect = 5.4
Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 6/59 (10%)
Query: 65 ISIWQITQHIVHYTKPSLQKHIIRILWMVPIYA-LNALI---GLEFPEQSI--YLDSLR 117
IS+W ITQ + TKP + +++ P A + A++ G E PE+ + Y+ +L+
Sbjct: 118 ISVWVITQQLTSITKPFHENIAALVVFYTPSKADMKAILHDYGAELPEEKMKEYIKALK 176
>SB_36582| Best HMM Match : Pox_A32 (HMM E-Value=0.067)
Length = 367
Score = 29.5 bits (63), Expect = 5.4
Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 6/59 (10%)
Query: 65 ISIWQITQHIVHYTKPSLQKHIIRILWMVPIYA-LNALI---GLEFPEQSI--YLDSLR 117
IS+W ITQ + TKP + +++ P A + A++ G E PE+ + Y+ +L+
Sbjct: 118 ISVWVITQQLTSITKPFHENIAALVVFYTPSKADMKAILHDYGAELPEEKMKEYIKALK 176
>SB_25448| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 538
Score = 29.5 bits (63), Expect = 5.4
Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 6/59 (10%)
Query: 65 ISIWQITQHIVHYTKPSLQKHIIRILWMVPIYA-LNALI---GLEFPEQSI--YLDSLR 117
IS+W ITQ + TKP + + +++ P A + A++ G E E+ I Y+ +L+
Sbjct: 458 ISVWVITQQLTSITKPFRENIVALVVFYTPSKADMKAILHDNGAELSEEKIKEYMKALK 516
>SB_14410| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 710
Score = 29.5 bits (63), Expect = 5.4
Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 6/59 (10%)
Query: 65 ISIWQITQHIVHYTKPSLQKHIIRILWMVPIYA-LNALI---GLEFPEQSI--YLDSLR 117
IS+W ITQ + TKP + + +++ P A + A++ G E E+ I Y+ +L+
Sbjct: 358 ISVWVITQQLTSITKPFRENIVALVVFYTPSKADMKAILHDNGAELSEEKIKEYMKALK 416
>SB_8782| Best HMM Match : CN_hydrolase (HMM E-Value=0)
Length = 242
Score = 29.5 bits (63), Expect = 5.4
Identities = 13/45 (28%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Query: 319 SDVKRDISEHLG--VVGSSFSRRLRGKSMYHMTRGYDESSRLMGE 361
S++ ++++ G +VG S R + +Y+ + YD S LMG+
Sbjct: 68 SNMLAEVAKETGAYIVGGSIPERASNRKLYNTSLSYDPSGNLMGK 112
>SB_46861| Best HMM Match : Neuralized (HMM E-Value=8.5)
Length = 217
Score = 29.1 bits (62), Expect = 7.1
Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 6/59 (10%)
Query: 65 ISIWQITQHIVHYTKPSLQKHIIRILWMVPIYA-LNALI---GLEFPEQSI--YLDSLR 117
IS+W ITQ + TKPS + +++ P A + A++ G E E+ + Y+ +L+
Sbjct: 137 ISVWVITQQLTSITKPSRENIAALVVFYTPSKADMKAILHDYGAELSEEKMKEYMKALK 195
>SB_9661| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 511
Score = 29.1 bits (62), Expect = 7.1
Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 6/59 (10%)
Query: 65 ISIWQITQHIVHYTKPSLQKHIIRILWMVPIYA-LNALI---GLEFPEQSI--YLDSLR 117
IS+W ITQ + TKP + +++ P A + A++ G E E+ I Y+++L+
Sbjct: 262 ISVWVITQQLTSITKPFRENIAALVVFYTPSKADMKAILHDYGAELSEEEIKEYMEALK 320
>SB_53170| Best HMM Match : DUF705 (HMM E-Value=5.1)
Length = 257
Score = 29.1 bits (62), Expect = 7.1
Identities = 18/79 (22%), Positives = 34/79 (43%), Gaps = 1/79 (1%)
Query: 328 HLGVVGSSFSRRLRGKSMYHMTRGYDESSRLMGEPVPS-SSAPNLTTETETPSVEVRPSA 386
H+ +VG SF+ + Y + GY+ L + +P+L+ P ++VR +
Sbjct: 109 HIFLVGGSFTSAGKHNVRYDTSNGYESLQGLKTIVLAGYRRSPSLSVRRPEPCLQVRRNR 168
Query: 387 YGSIENTVTNMSMTSETEP 405
Y ++N T+P
Sbjct: 169 YFVQAKALSNPGKGKSTDP 187
>SB_50497| Best HMM Match : CH (HMM E-Value=0.0084)
Length = 2086
Score = 28.7 bits (61), Expect = 9.4
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 5/75 (6%)
Query: 320 DVKRDISEHLGVVGSSFSRRLRGKSMYHMTRGYDESSRLMGEPVPSSSAPNLT-TETETP 378
D+ SE V G S L +++ H+ +E+S + + S+ T TE+P
Sbjct: 1331 DIAEPTSEETPVEGES----LEAQAVGHVEAAGEETSPVQSNQIESTVEEVPTDVPTESP 1386
Query: 379 SVEVRPSAYGSIENT 393
S EV+P +E+T
Sbjct: 1387 SAEVKPVQSDIVEST 1401
>SB_18540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 286
Score = 28.7 bits (61), Expect = 9.4
Identities = 14/44 (31%), Positives = 20/44 (45%)
Query: 362 PVPSSSAPNLTTETETPSVEVRPSAYGSIENTVTNMSMTSETEP 405
P +++ P TT T T + P A + NT T T+ T P
Sbjct: 110 PNATTTTPTATTTTTTTTTTTTPYATTTTPNTTTTTPNTTTTSP 153
>SB_15028| Best HMM Match : Drf_FH1 (HMM E-Value=0.84)
Length = 944
Score = 28.7 bits (61), Expect = 9.4
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 5/75 (6%)
Query: 320 DVKRDISEHLGVVGSSFSRRLRGKSMYHMTRGYDESSRLMGEPVPSSSAPNLT-TETETP 378
D+ SE V G S L +++ H+ +E+S + + S+ T TE+P
Sbjct: 226 DIAEPTSEETPVEGES----LEAQAVGHVEAAGEETSPVQSNQIESTVEEVPTDVPTESP 281
Query: 379 SVEVRPSAYGSIENT 393
S EV+P +E+T
Sbjct: 282 SAEVKPVQSDIVEST 296
>SB_5839| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 778
Score = 28.7 bits (61), Expect = 9.4
Identities = 16/56 (28%), Positives = 28/56 (50%)
Query: 363 VPSSSAPNLTTETETPSVEVRPSAYGSIENTVTNMSMTSETEPLLDASDKSNDNEN 418
V ++A T T T +V V + + S N+ +N + S + +++ KSN N N
Sbjct: 394 VTVTAAAARATATVTVTVTVTATVHNSNSNSNSNSNSNSNSNSNSNSNSKSNSNSN 449
>SB_3289| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 500
Score = 28.7 bits (61), Expect = 9.4
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 6/59 (10%)
Query: 65 ISIWQITQHIVHYTKPSLQKHIIRILWMVPIYA-LNALI---GLEFPEQSI--YLDSLR 117
IS+W ITQH+ TKP +++ P A + A++ G E E+ + Y+ +L+
Sbjct: 420 ISVWVITQHLTSITKPFRDNIAALVVFYTPSKADMKAILHDYGAEVSEEKMKEYMKALK 478
>SB_2435| Best HMM Match : WD40 (HMM E-Value=4.1e-10)
Length = 1272
Score = 28.7 bits (61), Expect = 9.4
Identities = 14/59 (23%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 191 ISMICELNDVYGESDFKPNVAFPYI--IAINNLSQFVAMYCLVLFYKANRTELKPMKPI 247
+S + + ++GE D+ P + FP++ N L F + C+++ + + E P P+
Sbjct: 430 LSALAHWSGIFGEVDYLPMMVFPFVKLFQNNQLICFEMVSCVLINWCQHWFEYFPNPPV 488
>SB_19195| Best HMM Match : LEA_4 (HMM E-Value=0.00053)
Length = 1152
Score = 28.7 bits (61), Expect = 9.4
Identities = 24/101 (23%), Positives = 40/101 (39%), Gaps = 3/101 (2%)
Query: 320 DVKRDISEHLGVVGSSFS--RRLRGKSMYHMTRGYDESSRLMGEPVPSSSAPNLTTETET 377
++ + +S H ++ + S R + ++ TR D S ++ E P +S+ TE
Sbjct: 342 NIDKALSNHRDIIDEALSKYRDIVDEAQNRRTRRLDLIS-VLSEIEPQTSSRTTIGNTEI 400
Query: 378 PSVEVRPSAYGSIENTVTNMSMTSETEPLLDASDKSNDNEN 418
+ GSI N T E A D N NE+
Sbjct: 401 RESDASIPQGGSISQCAANPHQTEEQTSKSKAEDAYNRNES 441
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.322 0.137 0.420
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,178,079
Number of Sequences: 59808
Number of extensions: 521047
Number of successful extensions: 1507
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 1490
Number of HSP's gapped (non-prelim): 31
length of query: 421
length of database: 16,821,457
effective HSP length: 84
effective length of query: 337
effective length of database: 11,797,585
effective search space: 3975786145
effective search space used: 3975786145
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 61 (28.7 bits)
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