BLASTP 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BGIBMGA001014-TA|BGIBMGA001014-PA|IPR005178|Protein of unknown function DUF300 (421 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At5g26740.2 68418.m03164 expressed protein contains Pfam profile... 171 7e-43 At5g26740.1 68418.m03163 expressed protein contains Pfam profile... 171 7e-43 At3g05940.1 68416.m00676 expressed protein contains Pfam profile... 168 7e-42 At1g77220.1 68414.m08994 expressed protein contains Pfam profile... 154 9e-38 At4g38360.2 68417.m05424 expressed protein contains Pfam profile... 136 2e-32 At4g38360.1 68417.m05423 expressed protein contains Pfam profile... 136 2e-32 At1g11200.1 68414.m01283 expressed protein contains Pfam profile... 128 9e-30 At4g21570.1 68417.m03120 expressed protein contains Pfam profile... 123 2e-28 At1g23070.1 68414.m02884 hypothetical protein contains Pfam prof... 120 2e-27 At5g35180.1 68418.m04169 expressed protein 32 0.83 At3g61670.1 68416.m06911 expressed protein weak similarity to ex... 30 2.5 At2g46160.1 68415.m05740 zinc finger (C3HC4-type RING finger) fa... 30 3.3 At3g12685.1 68416.m01583 expressed protein contains Pfam domain,... 29 4.4 At2g40860.1 68415.m05044 protein kinase family protein / protein... 29 7.7 At2g40140.1 68415.m04937 zinc finger (CCCH-type) family protein ... 29 7.7 At1g61215.1 68414.m06898 DNA-binding bromodomain-containing prot... 29 7.7 >At5g26740.2 68418.m03164 expressed protein contains Pfam profile PF03619: Domain of unknown function Length = 422 Score = 171 bits (416), Expect = 7e-43 Identities = 77/215 (35%), Positives = 132/215 (61%), Gaps = 1/215 (0%) Query: 65 ISIWQITQHIVHYTKPSLQKHIIRILWMVPIYALNALIGLEFPEQSIYLDSLRECYEAYV 124 ++I+ I +H+++YT+P+ Q++I+RI++MVP+YA + + L P+ SIY DS+RE YEA+V Sbjct: 23 LAIFHIYRHLLNYTEPTYQRYIVRIIFMVPVYAFMSFLSLVLPKSSIYFDSIREVYEAWV 82 Query: 125 IYNFMKYLLNYLNDGHDLEAVLETKP-QVYHIFPLCCLAPWEMGREFVHNCKHGILQYTL 183 IYNF+ L ++ + L + + CC P + F+ CK G LQ+ + Sbjct: 83 IYNFLSLCLAWVGGPGSVVLSLSGRSLKPSWSLMTCCFPPLTLDGRFIRRCKQGCLQFVI 142 Query: 184 VRPITTVISMICELNDVYGESDFKPNVAFPYIIAINNLSQFVAMYCLVLFYKANRTELKP 243 ++PI ++++ Y + +F P+ A+ Y+ I +S VA+Y LVLFY A R L+P Sbjct: 143 LKPILVAVTLVLYAKGKYKDGNFNPDQAYLYLTIIYTISYTVALYALVLFYMACRDLLQP 202 Query: 244 MKPIGKFLCIKAVVFFSFFQGVIITILVYCGVLKT 278 P+ KF+ IK+VVF +++QGV++ + G +K+ Sbjct: 203 FNPVPKFVIIKSVVFLTYWQGVLVFLAAKSGFIKS 237 >At5g26740.1 68418.m03163 expressed protein contains Pfam profile PF03619: Domain of unknown function Length = 422 Score = 171 bits (416), Expect = 7e-43 Identities = 77/215 (35%), Positives = 132/215 (61%), Gaps = 1/215 (0%) Query: 65 ISIWQITQHIVHYTKPSLQKHIIRILWMVPIYALNALIGLEFPEQSIYLDSLRECYEAYV 124 ++I+ I +H+++YT+P+ Q++I+RI++MVP+YA + + L P+ SIY DS+RE YEA+V Sbjct: 23 LAIFHIYRHLLNYTEPTYQRYIVRIIFMVPVYAFMSFLSLVLPKSSIYFDSIREVYEAWV 82 Query: 125 IYNFMKYLLNYLNDGHDLEAVLETKP-QVYHIFPLCCLAPWEMGREFVHNCKHGILQYTL 183 IYNF+ L ++ + L + + CC P + F+ CK G LQ+ + Sbjct: 83 IYNFLSLCLAWVGGPGSVVLSLSGRSLKPSWSLMTCCFPPLTLDGRFIRRCKQGCLQFVI 142 Query: 184 VRPITTVISMICELNDVYGESDFKPNVAFPYIIAINNLSQFVAMYCLVLFYKANRTELKP 243 ++PI ++++ Y + +F P+ A+ Y+ I +S VA+Y LVLFY A R L+P Sbjct: 143 LKPILVAVTLVLYAKGKYKDGNFNPDQAYLYLTIIYTISYTVALYALVLFYMACRDLLQP 202 Query: 244 MKPIGKFLCIKAVVFFSFFQGVIITILVYCGVLKT 278 P+ KF+ IK+VVF +++QGV++ + G +K+ Sbjct: 203 FNPVPKFVIIKSVVFLTYWQGVLVFLAAKSGFIKS 237 >At3g05940.1 68416.m00676 expressed protein contains Pfam profile PF03619: Domain of unknown function Length = 422 Score = 168 bits (408), Expect = 7e-42 Identities = 76/216 (35%), Positives = 135/216 (62%), Gaps = 5/216 (2%) Query: 65 ISIWQITQHIVHYTKPSLQKHIIRILWMVPIYALNALIGLEFPEQSIYLDSLRECYEAYV 124 ++++ I +H+++YT+P Q++I+RI++MVP+YAL + + L P+ SIY +S+RE YEA+V Sbjct: 23 LALFHIYKHLLNYTEPIYQRYIVRIVFMVPVYALMSFLALVLPKSSIYFNSIREVYEAWV 82 Query: 125 IYNFMKYLLNYLNDGHDLEAVL---ETKPQVYHIFPLCCLAPWEMGREFVHNCKHGILQY 181 IYNF+ L ++ + L KP +H+ CC+ P + F+ CK G LQ+ Sbjct: 83 IYNFLSLCLAWVGGPGSVVISLTGRSLKPS-WHLMT-CCIPPLPLDGRFIRRCKQGCLQF 140 Query: 182 TLVRPITTVISMICELNDVYGESDFKPNVAFPYIIAINNLSQFVAMYCLVLFYKANRTEL 241 +++PI ++++ Y + +F P+ ++ Y+ I +S VA+Y LVLFY A + L Sbjct: 141 VILKPILVAVTLVLYAKGKYKDGNFSPDQSYLYLTIIYTISYTVALYALVLFYVACKDLL 200 Query: 242 KPMKPIGKFLCIKAVVFFSFFQGVIITILVYCGVLK 277 +P P+ KF+ IK+VVF +++QGV++ + G ++ Sbjct: 201 QPFNPVPKFVIIKSVVFLTYWQGVLVFLFAKSGFIR 236 >At1g77220.1 68414.m08994 expressed protein contains Pfam profile PF03619: Domain of unknown function Length = 484 Score = 154 bits (374), Expect = 9e-38 Identities = 80/231 (34%), Positives = 134/231 (58%), Gaps = 19/231 (8%) Query: 65 ISIWQITQHIVHYTKPSLQKHIIRILWMVPIYALNALIGLEFPEQSIYLDSLRECYEAYV 124 + ++ I +H+ Y +P QK +I ++ MVP+YA+ + + L E + + +R+CYEA+ Sbjct: 56 LPMYLIFEHLASYNQPEEQKFLIGLILMVPVYAVESFLSLVNSEAAFNCEVIRDCYEAFA 115 Query: 125 IYNFMKYLLNYLNDGHD-----LE---AVLETKPQ---------VYHIFPL-CCLAPWEM 166 +Y F +YL+ L DG + +E + ++ P V H FP+ C + W + Sbjct: 116 LYCFERYLIACL-DGEERTIEFMEQQTVITQSTPLLEGTCSYGVVEHPFPMNCFVKDWSL 174 Query: 167 GREFVHNCKHGILQYTLVRPITTVISMICELNDVYGESDFKPNVAFPYIIAINNLSQFVA 226 G +F H K GI+QY +++ I +++MI E VYGE F N +PY+ + N SQ A Sbjct: 175 GPQFYHAVKIGIVQYMILKMICALLAMILEAFGVYGEGKFAWNYGYPYLAVVLNFSQTWA 234 Query: 227 MYCLVLFYKANRTELKPMKPIGKFLCIKAVVFFSFFQGVIITILVYCGVLK 277 +YCLV FY + +L P+KP+ KFL K++VF +++QG+I+ L G++K Sbjct: 235 LYCLVQFYNVIKDKLAPIKPLAKFLTFKSIVFLTWWQGIIVAFLFSMGLVK 285 >At4g38360.2 68417.m05424 expressed protein contains Pfam profile PF03619: Domain of unknown function Length = 485 Score = 136 bits (330), Expect = 2e-32 Identities = 75/231 (32%), Positives = 127/231 (54%), Gaps = 17/231 (7%) Query: 65 ISIWQITQHIVHYTKPSLQKHIIRILWMVPIYALNALIGLEFPEQSIYLDSLRECYEAYV 124 +S++ + H+ Y P QK +I ++ MVP Y++ + L P S+ LR+CYE++ Sbjct: 34 LSLFLVFDHLSTYKNPEEQKFLIGVILMVPCYSIESFASLVKPSISVDCGILRDCYESFA 93 Query: 125 IYNFMKYLLNYLN-DGHDLE------------AVLETKPQ---VYHIFPL-CCLAPWEMG 167 +Y F +YL+ + + +E +L+ K + + H FP+ L PW + Sbjct: 94 MYCFGRYLVACIGGEERTIEFMERQGRKSFKTPLLDHKDEKGIIKHPFPMNLFLKPWRLS 153 Query: 168 REFVHNCKHGILQYTLVRPITTVISMICELNDVYGESDFKPNVAFPYIIAINNLSQFVAM 227 F K GI+QY +++ +T + ++I E VY E +FK +PY+ + N SQ A+ Sbjct: 154 PWFYQVVKFGIVQYMIIKSLTALTALILEAFGVYCEGEFKWGCGYPYLAVVLNFSQSWAL 213 Query: 228 YCLVLFYKANRTELKPMKPIGKFLCIKAVVFFSFFQGVIITILVYCGVLKT 278 YCLV FY A + EL ++P+ KFL K++VF +++QGV I +L G+ K+ Sbjct: 214 YCLVQFYGATKDELAHIQPLAKFLTFKSIVFLTWWQGVAIALLSSLGLFKS 264 >At4g38360.1 68417.m05423 expressed protein contains Pfam profile PF03619: Domain of unknown function Length = 304 Score = 136 bits (330), Expect = 2e-32 Identities = 75/231 (32%), Positives = 127/231 (54%), Gaps = 17/231 (7%) Query: 65 ISIWQITQHIVHYTKPSLQKHIIRILWMVPIYALNALIGLEFPEQSIYLDSLRECYEAYV 124 +S++ + H+ Y P QK +I ++ MVP Y++ + L P S+ LR+CYE++ Sbjct: 34 LSLFLVFDHLSTYKNPEEQKFLIGVILMVPCYSIESFASLVKPSISVDCGILRDCYESFA 93 Query: 125 IYNFMKYLLNYLN-DGHDLE------------AVLETKPQ---VYHIFPL-CCLAPWEMG 167 +Y F +YL+ + + +E +L+ K + + H FP+ L PW + Sbjct: 94 MYCFGRYLVACIGGEERTIEFMERQGRKSFKTPLLDHKDEKGIIKHPFPMNLFLKPWRLS 153 Query: 168 REFVHNCKHGILQYTLVRPITTVISMICELNDVYGESDFKPNVAFPYIIAINNLSQFVAM 227 F K GI+QY +++ +T + ++I E VY E +FK +PY+ + N SQ A+ Sbjct: 154 PWFYQVVKFGIVQYMIIKSLTALTALILEAFGVYCEGEFKWGCGYPYLAVVLNFSQSWAL 213 Query: 228 YCLVLFYKANRTELKPMKPIGKFLCIKAVVFFSFFQGVIITILVYCGVLKT 278 YCLV FY A + EL ++P+ KFL K++VF +++QGV I +L G+ K+ Sbjct: 214 YCLVQFYGATKDELAHIQPLAKFLTFKSIVFLTWWQGVAIALLSSLGLFKS 264 >At1g11200.1 68414.m01283 expressed protein contains Pfam profile PF03619: Domain of unknown function Length = 295 Score = 128 bits (308), Expect = 9e-30 Identities = 67/217 (30%), Positives = 125/217 (57%), Gaps = 14/217 (6%) Query: 70 ITQHIVHYTKPSLQKHIIRILWMVPIYALNALIGLEFPEQS----IYLDSLRECYEAYVI 125 ++QH+ ++ KP+ Q+ I+ I+ M P+YA+N+ +GL + S ++LD+++ECYEA VI Sbjct: 32 VSQHLFYWKKPNEQRAILIIVLMAPVYAINSFVGLLDAKGSKPFFMFLDAVKECYEALVI 91 Query: 126 YNFMKYLLNYLNDGHDLEAVLETKP--QVYHIFPLCCLAPWEMGREFV--HNCKHGILQY 181 F+ + +Y+N + + +++H FP+ P +++ K Q+ Sbjct: 92 AKFLALMYSYVNISMSARIIPDEFKGREIHHSFPMTLFVPRTTHLDYLTLKQLKQWTWQF 151 Query: 182 TLVRPITTVISMICELNDVYGESDFKPNVAFPYIIAINNLSQFVAMYCLVLFYKANRTEL 241 ++RP+ +++ + ++ +Y P AI N+S +A+Y LV FY EL Sbjct: 152 CIIRPVCSILMITLQILGIY------PVWLSWIFTAILNVSVSLALYSLVKFYHVFAKEL 205 Query: 242 KPMKPIGKFLCIKAVVFFSFFQGVIITILVYCGVLKT 278 +P KP+ KF+C+K +VFF F+QG+++ ILV G++K+ Sbjct: 206 EPHKPLTKFMCVKGIVFFCFWQGIVLKILVGLGLIKS 242 >At4g21570.1 68417.m03120 expressed protein contains Pfam profile PF03619: Domain of unknown function Length = 294 Score = 123 bits (297), Expect = 2e-28 Identities = 72/221 (32%), Positives = 122/221 (55%), Gaps = 14/221 (6%) Query: 66 SIWQITQHIVHYTKPSLQKHIIRILWMVPIYALNALIGLEFPEQS----IYLDSLRECYE 121 +I ++QH+ H+ P QK I+ I+ M PIYA+ + IGL + S ++L+S++ECYE Sbjct: 28 TIQLVSQHLFHWKNPKEQKAILIIVLMAPIYAVVSFIGLLEVKGSETFFLFLESIKECYE 87 Query: 122 AYVIYNFMKYLLNYLNDGHDLEAVLE--TKPQVYHIFPLCCLAPW--EMGREFVHNCKHG 177 A VI F+ + +YLN + + +++H FP+ P + R + K+ Sbjct: 88 ALVIAKFLALMYSYLNISMSKNILPDGIKGREIHHSFPMTLFQPHVVRLDRHTLKLLKYW 147 Query: 178 ILQYTLVRPITTVISMICELNDVYGESDFKPNVAFPYIIAINNLSQFVAMYCLVLFYKAN 237 Q+ ++RP+ + + + +L Y +++ + I +N S +A+Y LV+FY Sbjct: 148 TWQFVVIRPVCSTLMIALQLIGFYPSW-----LSWTFTIIVN-FSVSLALYSLVIFYHVF 201 Query: 238 RTELKPMKPIGKFLCIKAVVFFSFFQGVIITILVYCGVLKT 278 EL P P+ KFLCIK +VFF F+QG+ + ILV G +K+ Sbjct: 202 AKELAPHNPLAKFLCIKGIVFFVFWQGIALDILVAMGFIKS 242 >At1g23070.1 68414.m02884 hypothetical protein contains Pfam profile PF03619: Domain of unknown function Length = 414 Score = 120 bits (289), Expect = 2e-27 Identities = 74/238 (31%), Positives = 123/238 (51%), Gaps = 26/238 (10%) Query: 65 ISIWQITQHIVHYTKPSLQKHIIRILWMVPIYALNALIGLEFPEQSIYLDSLR---ECYE 121 +S++ I QH+ YT P+ QK I+ +L+MVP+YA ++I L + S+ D LR E + Sbjct: 30 LSLYSILQHLRFYTNPAEQKWIVSVLFMVPVYATESIISLSNSKFSLPCDILRNCYEAFA 89 Query: 122 AYVIYNFMKYLLNYLN-----------------DGHDLEAVLET------KPQVYHIFPL 158 Y +++ L L+ + + +LE K + + F Sbjct: 90 LYSFGSYLVACLGELSKIPNEWSGGERRVVEYLENESKKPLLEEGANESKKKKKKNSFWK 149 Query: 159 CCLAPWEMGREFVHNCKHGILQYTLVRPITTVISMICELNDVYGESDFKPNVAFPYIIAI 218 P+ +GRE K G++QY +++ ++ + EL VYG+ +FK +PYI+ + Sbjct: 150 FLCDPYVLGRELFVIEKFGLVQYMILKTFCAFLTFLLELLGVYGDGEFKWYYGYPYIVVV 209 Query: 219 NNLSQFVAMYCLVLFYKANRTELKPMKPIGKFLCIKAVVFFSFFQGVIITILVYCGVL 276 N SQ A++CLV FY LK +KP+ KF+ KA+VF +++QG I +L Y G+L Sbjct: 210 LNFSQMWALFCLVQFYNVTHERLKEIKPLAKFISFKAIVFATWWQGFGIALLCYYGIL 267 >At5g35180.1 68418.m04169 expressed protein Length = 778 Score = 31.9 bits (69), Expect = 0.83 Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 1/45 (2%) Query: 207 KPNVAFPYIIAINNLSQFVAMYCLVLFYKANRTELKPMKPIGKFL 251 +P P+I+ IN YCLVL+Y A+R + +GKF+ Sbjct: 620 EPGKKLPFILVINLQVPAKPNYCLVLYYAADR-PVNKTSSLGKFV 663 >At3g61670.1 68416.m06911 expressed protein weak similarity to extra-large G-protein [Arabidopsis thaliana] GI:3201682 Length = 790 Score = 30.3 bits (65), Expect = 2.5 Identities = 17/48 (35%), Positives = 29/48 (60%), Gaps = 5/48 (10%) Query: 372 TTETETPSVEVRPSAYGSIENTVTNMSMTSETEPLLDASDKSNDNENP 419 T E E SV V+ S+E+T +S +S + +LD+S+ S+D++ P Sbjct: 41 TKEREADSVSVK-----SVEDTAKPVSASSPEKAILDSSETSSDSDVP 83 >At2g46160.1 68415.m05740 zinc finger (C3HC4-type RING finger) family protein similar to RING-H2 zinc finger protein ATL6 [Arabidopsis thaliana] GI:4928403; contains Pfam profile PF00097: Zinc finger, C3HC4 type (RING finger) Length = 214 Score = 29.9 bits (64), Expect = 3.3 Identities = 15/54 (27%), Positives = 24/54 (44%) Query: 145 VLETKPQVYHIFPLCCLAPWEMGREFVHNCKHGILQYTLVRPITTVISMICELN 198 +L P+ H F LCCL W C++ L P++T +S + L+ Sbjct: 150 MLRMMPECKHYFHLCCLDAWLKLNGSCPVCRNSPLPTPTSTPLSTPLSEVVPLS 203 >At3g12685.1 68416.m01583 expressed protein contains Pfam domain, PF02681: Uncharacterized BCR, COG1963 Length = 213 Score = 29.5 bits (63), Expect = 4.4 Identities = 18/70 (25%), Positives = 30/70 (42%), Gaps = 2/70 (2%) Query: 313 LAMWDVSDVKRDISEHLGVVGSSFSRRLRGKSMYHMTRGYDESSRLMGEPVPSSSAPNLT 372 L M+D V+R++ +H V+ + R + M +G + + L E + AP L Sbjct: 128 LIMYDAQGVRREVGKHAKVLNKLTANARRSEVM--SLKGNESNKALTSEEISEEIAPPLK 185 Query: 373 TETETPSVEV 382 VEV Sbjct: 186 ESIGHTEVEV 195 >At2g40860.1 68415.m05044 protein kinase family protein / protein phosphatase 2C ( PP2C) family protein contains Pfam PF00481: Protein phosphatase 2C domain; contains Pfam PF00069: Protein kinase domain; similar to partner of PIX 1 (GI:21702695) [Homo sapiens] Length = 658 Score = 28.7 bits (61), Expect = 7.7 Identities = 21/76 (27%), Positives = 40/76 (52%), Gaps = 5/76 (6%) Query: 278 TIFDISDTD---TVKIISSKLQPYVSPLDAS-PSCLGSFLA-MWDVSDVKRDISEHLGVV 332 T+ +++ T+ TV I+SS L+P ++ + P L S + W+ KR S+++ + Sbjct: 251 TVLEMNYTEQQLTVAIVSSGLRPALAEIGLHLPKSLLSLIQNCWESDPSKRPSSDNVVLE 310 Query: 333 GSSFSRRLRGKSMYHM 348 S ++RGK H+ Sbjct: 311 LESIWEQVRGKQQGHL 326 >At2g40140.1 68415.m04937 zinc finger (CCCH-type) family protein contains Pfam domain, PF00642: Zinc finger C-x8-C-x5-C-x3-H type (and similar) and Pfam domain, PF00023: Ankyrin repeat Length = 597 Score = 28.7 bits (61), Expect = 7.7 Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 9/60 (15%) Query: 304 ASPSCLGSFLAMWDVSDVKRDISEHLGV----VGSSFSRRLRGKSMYHMTRGYDESSRLM 359 AS +CL F A D+S KR+I E+ V G + RR+ K M G++E + LM Sbjct: 28 ASATCLLEFAACDDLSSFKREIEENPSVEIDESGFWYCRRVGSKKM-----GFEERTPLM 82 >At1g61215.1 68414.m06898 DNA-binding bromodomain-containing protein contains Pfam profile PF00439: Bromodomain Length = 475 Score = 28.7 bits (61), Expect = 7.7 Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 1/65 (1%) Query: 352 YDESSRLMGEPVPSSSAPNLTTETETPSVEVRPSAYGSIENTVTNMSMTSETE-PLLDAS 410 YD S L EP P S T +T ++ E T TN S +++E P++ Sbjct: 118 YDSSRTLSLEPSPKSEGGGECTSKDTSKDLSSVGSFTQQELTTTNWSPEAKSEAPVVIEQ 177 Query: 411 DKSND 415 +K+ D Sbjct: 178 EKTKD 182 Database: arabidopsis Posted date: Oct 3, 2007 3:31 PM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.322 0.137 0.420 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 9,487,069 Number of Sequences: 28952 Number of extensions: 386209 Number of successful extensions: 980 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 10 Number of HSP's successfully gapped in prelim test: 6 Number of HSP's that attempted gapping in prelim test: 959 Number of HSP's gapped (non-prelim): 20 length of query: 421 length of database: 12,070,560 effective HSP length: 83 effective length of query: 338 effective length of database: 9,667,544 effective search space: 3267629872 effective search space used: 3267629872 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.9 bits) S2: 61 (28.7 bits)
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