GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001013-TA|BGIBMGA001013-PA|IPR002290|Serine/threonine
protein kinase, IPR000719|Protein kinase, IPR008271|Serine/threonine
protein kinase, active site, IPR001245|Tyrosine protein kinase,
IPR011009|Protein kinase-like
         (360 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    56   3e-10

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 56.4 bits (130), Expect = 3e-10
 Identities = 33/93 (35%), Positives = 53/93 (56%), Gaps = 5/93 (5%)

Query: 132 RQIISGLQYIHTMNIAHRDLKCENVLVTANYNVKITDFGFARNVRQRDRDVLSETYCGSL 191
           RQ+  G++++    + HRDL   NVLV  N+ VK++DFG +R+V Q   +V  +   G L
Sbjct: 599 RQVALGMEHLAKTRVVHRDLAARNVLVCENHTVKVSDFGLSRDVYQ--DNVYCKNGGGKL 656

Query: 192 --SYAAPEVLKGVPYMPKLADMWSIGVILYTML 222
              + A E L    Y    +D+WS GV+L+ ++
Sbjct: 657 PVRWMALESLTHQRY-TTYSDVWSFGVLLWEIV 688


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.319    0.134    0.387 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,933
Number of Sequences: 317
Number of extensions: 3252
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 2
Number of HSP's gapped (non-prelim): 1
length of query: 360
length of database: 114,650
effective HSP length: 58
effective length of query: 302
effective length of database: 96,264
effective search space: 29071728
effective search space used: 29071728
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 44 (21.8 bits)