Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001012-TA|BGIBMGA001012-PA|IPR011009|Protein
kinase-like, IPR000719|Protein kinase, IPR008271|Serine/threonine
protein kinase, active site, IPR001245|Tyrosine protein kinase,
IPR002290|Serine/threonine protein kinase
         (655 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    56   8e-10
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    25   2.2  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 56.0 bits (129), Expect = 8e-10
 Identities = 34/89 (38%), Positives = 51/89 (57%), Gaps = 2/89 (2%)

Query: 128 RQLALGLQYLHELEIAHRDIKCENVLLTANFNVKLSDFGFSRFCVESDNQPVLSETYCGS 187
           RQ+ALG+++L +  + HRD+   NVL+  N  VK+SDFG SR  V  DN    +      
Sbjct: 599 RQVALGMEHLAKTRVVHRDLAARNVLVCENHTVKVSDFGLSR-DVYQDNVYCKNGGGKLP 657

Query: 188 MSYAAPEILRGKPYCPKPTDLWSLGVVLF 216
           + + A E L  + Y    +D+WS GV+L+
Sbjct: 658 VRWMALESLTHQRYTTY-SDVWSFGVLLW 685



 Score = 51.6 bits (118), Expect = 2e-08
 Identities = 33/109 (30%), Positives = 57/109 (52%), Gaps = 7/109 (6%)

Query: 432 RQLALAIQYMHELEIAHRDIKCENVLLTANQNVKLSDFGFARMCVDKKLNEIRSETFCGS 491
           RQ+AL ++++ +  + HRD+   NVL+  N  VK+SDFG +R   D   + +  +   G 
Sbjct: 599 RQVALGMEHLAKTRVVHRDLAARNVLVCENHTVKVSDFGLSR---DVYQDNVYCKNGGGK 655

Query: 492 L--SYTAPEILQGTPYLPKPTDVWSLGIVVY-VMLNRAMPFEDKHIKQL 537
           L   + A E L    Y    +DVWS G++++ ++     P+   H  +L
Sbjct: 656 LPVRWMALESLTHQRYTTY-SDVWSFGVLLWEIVTLGGTPYVGVHSSEL 703


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 24.6 bits (51), Expect = 2.2
 Identities = 14/50 (28%), Positives = 28/50 (56%), Gaps = 1/50 (2%)

Query: 358 IDTSTAPRDFVKKFLPREIEMLIKLSHPHLVHTHSIFQRRYKYFIFMRYM 407
           I+TS     F++ F+ + IE  +KL +  L+  +   + R +  +F+RY+
Sbjct: 93  INTSINGTKFIE-FINKLIEFDVKLQNVSLIINYENQRTRSRIHLFVRYV 141


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.320    0.135    0.400 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,552
Number of Sequences: 317
Number of extensions: 6919
Number of successful extensions: 12
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 9
Number of HSP's gapped (non-prelim): 3
length of query: 655
length of database: 114,650
effective HSP length: 61
effective length of query: 594
effective length of database: 95,313
effective search space: 56615922
effective search space used: 56615922
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 46 (22.6 bits)