GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001011-TA|BGIBMGA001011-PA|IPR001382|Glycoside
hydrolase, family 47
         (686 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF519384-1|ABP68493.1|  506|Anopheles gambiae LRIM1 protein.           26   3.8  
EF519372-1|ABP68481.1|  506|Anopheles gambiae LRIM1 protein.           26   3.8  
EF519365-1|ABP68474.1|  486|Anopheles gambiae LRIM1 protein.           25   5.0  
AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeot...    25   5.0  
DQ314781-1|ABC54566.1|  407|Anopheles gambiae OSKAR protein.           25   6.6  
AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.       25   6.6  

>EF519384-1|ABP68493.1|  506|Anopheles gambiae LRIM1 protein.
          Length = 506

 Score = 25.8 bits (54), Expect = 3.8
 Identities = 19/89 (21%), Positives = 39/89 (43%), Gaps = 5/89 (5%)

Query: 540 ERENANESNLSDLVKETINKYYND-TINAE---TQENVKHSAEEPTA-GSSQTVEVDDII 594
           EREN       D +KE      +  T+  +   T E  K + +E  + G     E+D  +
Sbjct: 353 ERENQARQREIDALKEQYRTVIDQVTLRKQAKITLEQKKKALDEQVSNGRRAHAELDGTL 412

Query: 595 VPEKSEVQLPSVTKTKEVMNMLPKVIQDF 623
                +++LP  T+ +  + +L  +++ +
Sbjct: 413 QQAVGQIELPHATEEQSPLQLLRAIVKRY 441


>EF519372-1|ABP68481.1|  506|Anopheles gambiae LRIM1 protein.
          Length = 506

 Score = 25.8 bits (54), Expect = 3.8
 Identities = 19/89 (21%), Positives = 39/89 (43%), Gaps = 5/89 (5%)

Query: 540 ERENANESNLSDLVKETINKYYND-TINAE---TQENVKHSAEEPTA-GSSQTVEVDDII 594
           EREN       D +KE      +  T+  +   T E  K + +E  + G     E+D  +
Sbjct: 353 ERENQARQREIDALKEQYRTVIDQVTLRKQAKITLEQKKKALDEQVSNGRRAHAELDGTL 412

Query: 595 VPEKSEVQLPSVTKTKEVMNMLPKVIQDF 623
                +++LP  T+ +  + +L  +++ +
Sbjct: 413 KQAVGQIELPHATEEQSPLQLLRAIVKRY 441


>EF519365-1|ABP68474.1|  486|Anopheles gambiae LRIM1 protein.
          Length = 486

 Score = 25.4 bits (53), Expect = 5.0
 Identities = 19/89 (21%), Positives = 39/89 (43%), Gaps = 5/89 (5%)

Query: 540 ERENANESNLSDLVKETINKYYND-TINAE---TQENVKHSAEEPTA-GSSQTVEVDDII 594
           EREN       D +KE      +  T+  +   T E  K + +E  + G     E+D  +
Sbjct: 353 ERENQARQREIDALKEQYRTVIDQVTLRKQAKITLEQKKKALDEQVSNGRRAHAELDGTL 412

Query: 595 VPEKSEVQLPSVTKTKEVMNMLPKVIQDF 623
                +++LP  T+ +  + +L  +++ +
Sbjct: 413 KXAVGQIELPHATEEQSPLQLLRAIVKRY 441


>AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeotic
           protein protein.
          Length = 308

 Score = 25.4 bits (53), Expect = 5.0
 Identities = 9/30 (30%), Positives = 16/30 (53%)

Query: 603 LPSVTKTKEVMNMLPKVIQDFLNSDWKSKP 632
           LP +T+   ++      +Q F ++DW S P
Sbjct: 92  LPDITRHPWLVTASQSALQKFASTDWMSNP 121


>DQ314781-1|ABC54566.1|  407|Anopheles gambiae OSKAR protein.
          Length = 407

 Score = 25.0 bits (52), Expect = 6.6
 Identities = 12/42 (28%), Positives = 19/42 (45%)

Query: 55  RVVDIVLQKRHFDADINVSVFETNIRIVGGLLSAHLLSHKTG 96
           R +D+     H D  +    F+   R V G +  H+L +K G
Sbjct: 341 RTIDLWKHFVHADGTVRFECFQPGPRKVSGSIMPHVLWNKLG 382


>AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.
          Length = 525

 Score = 25.0 bits (52), Expect = 6.6
 Identities = 17/53 (32%), Positives = 22/53 (41%), Gaps = 1/53 (1%)

Query: 105 CNGPLLRLAEDVAQRLIAAFDTTTGMPYGTINLRSGVPPGETSITCT-AGVGT 156
           C G    L  ++   +     +TT MP       S V PG T+ T T A  GT
Sbjct: 384 CGGGRYPLMHEIRSLVNGGTPSTTTMPPSVAPTTSTVAPGTTTTTPTGANPGT 436


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.317    0.136    0.404 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 715,411
Number of Sequences: 2123
Number of extensions: 31219
Number of successful extensions: 108
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 106
Number of HSP's gapped (non-prelim): 6
length of query: 686
length of database: 516,269
effective HSP length: 69
effective length of query: 617
effective length of database: 369,782
effective search space: 228155494
effective search space used: 228155494
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 51 (24.6 bits)