Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001010-TA|BGIBMGA001010-PA|IPR002557|Chitin binding
Peritrophin-A
(241 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_59669| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.28
SB_15137| Best HMM Match : SRCR (HMM E-Value=4.9e-28) 31 0.65
SB_59667| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.86
SB_13694| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_56315| Best HMM Match : Collagen (HMM E-Value=0.00013) 29 2.6
SB_34532| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_7978| Best HMM Match : F5_F8_type_C (HMM E-Value=1.2e-22) 29 2.6
SB_31266| Best HMM Match : PKI (HMM E-Value=1) 29 4.6
SB_18656| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_16570| Best HMM Match : Metallothio_Pro (HMM E-Value=8.2) 29 4.6
SB_59041| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_38004| Best HMM Match : CXCXC (HMM E-Value=5.5e-08) 28 8.0
>SB_59669| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3511
Score = 32.7 bits (71), Expect = 0.28
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 7/76 (9%)
Query: 25 ICEPNNKVRLCEGD-NII-GPAFLCPPNTVCNEDSGDVCENTVNYIDPDFNKAVRCHRNE 82
+CE N V +C+ + N+ +C N E++ +VCEN +N + + N C NE
Sbjct: 3437 VCE--NNVNVCKNNVNMCKNNVNVCENNVNVCENNENVCENNLNVCENNLNV---CENNE 3491
Query: 83 RIADPSVPGCKGYILC 98
+ + + C+ + C
Sbjct: 3492 NVCENNENVCENNLTC 3507
Score = 32.3 bits (70), Expect = 0.37
Identities = 25/96 (26%), Positives = 42/96 (43%), Gaps = 12/96 (12%)
Query: 25 ICEPNNKVRLCEGDNIIGPAFLCPPNTVCNEDSGDVCENTVNYIDPDFNKAVR----CHR 80
+CE N V +C+ + +C N E++ +VCEN VN + + N C
Sbjct: 3381 VCE--NNVNVCKNN-----MDMCKNNVNVCENNVNVCENNVNVCENNENVCENNLNVCEN 3433
Query: 81 NERIADPSVPGCKGYI-LCIPNKSRFQGIKFQCSGN 115
NE + + +V CK + +C N + + C N
Sbjct: 3434 NENVCENNVNVCKNNVNMCKNNVNVCENNVNVCENN 3469
>SB_15137| Best HMM Match : SRCR (HMM E-Value=4.9e-28)
Length = 327
Score = 31.5 bits (68), Expect = 0.65
Identities = 23/71 (32%), Positives = 29/71 (40%), Gaps = 9/71 (12%)
Query: 98 CIPNKSRFQGIKFQCSGNTIFNGYTRTCSAPTK-YRCPL-LNSTKNGLELFNENRRIDTY 155
C P+ F G CS N I N +T C+ K RC + + S N N N T
Sbjct: 79 CFPSPCLFNG---SCSPNFINNSFTCNCTGGYKGARCEIGMQSNNNN----NSNNNNSTS 131
Query: 156 QGNLKNRNSEN 166
N RN+ N
Sbjct: 132 NSNSSTRNNNN 142
>SB_59667| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 142
Score = 31.1 bits (67), Expect = 0.86
Identities = 21/87 (24%), Positives = 36/87 (41%), Gaps = 6/87 (6%)
Query: 25 ICEPNNKVRLCEG-DNIIGPAFLCPPNTVCNEDSGDVCENTVNYIDPDFNKAVRCHRNER 83
+CE N V CE +N+ +C N +++ +VCEN N + + N C N
Sbjct: 29 VCENNENV--CENNENVNNNVNVCKNNVNMCKNNVNVCENNENVCENNENV---CENNVN 83
Query: 84 IADPSVPGCKGYILCIPNKSRFQGIKF 110
+ + S C+ N G+ +
Sbjct: 84 VCENSENVCENSEKVCENNENVAGVNY 110
Score = 28.3 bits (60), Expect = 6.0
Identities = 20/69 (28%), Positives = 31/69 (44%), Gaps = 6/69 (8%)
Query: 29 NNKVRLCEGD-NII-GPAFLCPPNTVCNEDSGDVCENTVNYIDPDFNKAVR----CHRNE 82
NN V +C+ + N+ +C N E++ +VCEN VN + N C NE
Sbjct: 44 NNNVNVCKNNVNMCKNNVNVCENNENVCENNENVCENNVNVCENSENVCENSEKVCENNE 103
Query: 83 RIADPSVPG 91
+A + G
Sbjct: 104 NVAGVNYGG 112
>SB_13694| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 767
Score = 30.7 bits (66), Expect = 1.1
Identities = 23/82 (28%), Positives = 35/82 (42%), Gaps = 9/82 (10%)
Query: 57 SGDVCENTVNY-IDPDFNKAVRCHRNERIADPSVPGCKGYILCIPNKSRFQGIKFQCSGN 115
+G +C TV I DF K + DP C+G+I C + ++ C G
Sbjct: 59 TGAICTVTVTADIHDDFCKY---KPDGEYRDP-YDACRGFIHCHNYNASYK----PCPGG 110
Query: 116 TIFNGYTRTCSAPTKYRCPLLN 137
++N T+ C P CP+ N
Sbjct: 111 LLYNEKTKQCDWPRNVDCPMGN 132
>SB_56315| Best HMM Match : Collagen (HMM E-Value=0.00013)
Length = 898
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/34 (41%), Positives = 18/34 (52%)
Query: 50 NTVCNEDSGDVCENTVNYIDPDFNKAVRCHRNER 83
N +C E SGDV + I + NKA+ HR R
Sbjct: 599 NVMCEELSGDVKLQQITLIKGNINKALEHHRQVR 632
>SB_34532| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 128
Score = 29.5 bits (63), Expect = 2.6
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 8/77 (10%)
Query: 25 ICEPNNKVRLCEGDNIIGPAFLCPPNTVCNED-SGDVCEN--TVNYIDPDFNKAVRCHRN 81
ICE + V +CEGD + P T+C+ D S +C+ +V + D + A+ C +
Sbjct: 28 ICEGDPSVTMCEGDPSVTMCEGDPSVTMCDGDPSVTMCKGDPSVTMCEGDPSVAM-CEGD 86
Query: 82 ERIA----DPSVPGCKG 94
+A +PSV C+G
Sbjct: 87 PSVAMCEGNPSVTMCEG 103
Score = 28.3 bits (60), Expect = 6.0
Identities = 23/73 (31%), Positives = 31/73 (42%), Gaps = 9/73 (12%)
Query: 25 ICEPNNKVRLCEGDNIIGPAFLCPPNTVCNED-SGDVCEN--TVNYIDPDFNKAVRCHRN 81
+CE + V +CE D + P T+C D S +CE +V + D C
Sbjct: 1 MCEGDPSVTMCESDPSVAMCEGDPSVTICEGDPSVTMCEGDPSVTMCEGD-PSVTMCD-- 57
Query: 82 ERIADPSVPGCKG 94
DPSV CKG
Sbjct: 58 ---GDPSVTMCKG 67
Score = 28.3 bits (60), Expect = 6.0
Identities = 25/87 (28%), Positives = 37/87 (42%), Gaps = 8/87 (9%)
Query: 15 TNFDCGPYGFICEPNNKVRLCEGDNIIGPAFLCPPNTVCNED-SGDVCEN--TVNYIDPD 71
T + P +CE + V +CEGD + P T+C D S +C+ +V D
Sbjct: 9 TMCESDPSVAMCEGDPSVTICEGDPSVTMCEGDPSVTMCEGDPSVTMCDGDPSVTMCKGD 68
Query: 72 FNKAVRCHRNERIA----DPSVPGCKG 94
C + +A DPSV C+G
Sbjct: 69 -PSVTMCEGDPSVAMCEGDPSVAMCEG 94
>SB_7978| Best HMM Match : F5_F8_type_C (HMM E-Value=1.2e-22)
Length = 1151
Score = 29.5 bits (63), Expect = 2.6
Identities = 20/74 (27%), Positives = 28/74 (37%), Gaps = 2/74 (2%)
Query: 99 IPNKSRFQGIKFQCSGNTIFNGYTRTCSAPTKYRCPLLNSTKNGLELFNENRRIDTYQGN 158
IP + I+ + N+I TC T CP++ N N Q N
Sbjct: 651 IPESGCARQIRHREYNNSIIYVQRDTCDGLTS--CPVIKDETRTNNSNNNNSNHTQQQPN 708
Query: 159 LKNRNSENPAQKPK 172
+ N+NS QK K
Sbjct: 709 INNKNSHTQQQKQK 722
>SB_31266| Best HMM Match : PKI (HMM E-Value=1)
Length = 1507
Score = 28.7 bits (61), Expect = 4.6
Identities = 9/25 (36%), Positives = 17/25 (68%)
Query: 149 NRRIDTYQGNLKNRNSENPAQKPKP 173
N+ ++T++ N++NR P + PKP
Sbjct: 382 NQLLNTFRNNIRNRKDSMPPRPPKP 406
>SB_18656| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3292
Score = 28.7 bits (61), Expect = 4.6
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 8/53 (15%)
Query: 50 NTVCNEDSGDVCENTVNYIDPDFNKAVRCHRNE--------RIADPSVPGCKG 94
N VCN+ +G+ N +Y P N+ ++C+ E R++D P KG
Sbjct: 2015 NPVCNKTTGECYCNPYHYRSPKGNECLKCNCEEIGSLSLQCRVSDGQCPCIKG 2067
>SB_16570| Best HMM Match : Metallothio_Pro (HMM E-Value=8.2)
Length = 85
Score = 28.7 bits (61), Expect = 4.6
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 5/56 (8%)
Query: 34 LCEGDNIIGPAFLCPPNT-VCNEDSGDV--CENTVNYIDPDFNKAVRCHRNERIAD 86
LC+ D+ A C + +C+ D D C +T D D N A+RC + D
Sbjct: 21 LCDRDH--NDALRCSSTSALCDRDHNDALRCSSTSALCDRDHNDALRCSSTSALCD 74
>SB_59041| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 350
Score = 28.3 bits (60), Expect = 6.0
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Query: 171 PKPIECRNYKFSVTQDSVP---VKATYFCPSRPVVGENSVRCTIFSNQFCITLERDSE 225
PKP+ R ++ SVTQ+ V VK+ + S VG N T CI + +S+
Sbjct: 3 PKPVPARGHQASVTQEKVTQGVVKSFFIDQSGMAVGRNFRLSTNLCLFLCIYMVFNSD 60
>SB_38004| Best HMM Match : CXCXC (HMM E-Value=5.5e-08)
Length = 240
Score = 27.9 bits (59), Expect = 8.0
Identities = 20/78 (25%), Positives = 31/78 (39%), Gaps = 3/78 (3%)
Query: 132 RCPLLNSTKNGLELFNENRRIDTYQGNLKNRNSENPAQKPKPIECRNYKFSVTQDSVPVK 191
R L++ LFN R +Q R SE Q+ + Y + ++ PVK
Sbjct: 61 RVILIHDAGRHFLLFNVLLRTGRWQNQ---RQSEPSRQERDFLSINEYNHTGCREDCPVK 117
Query: 192 ATYFCPSRPVVGENSVRC 209
++ P V +N RC
Sbjct: 118 SSSCDPKMQVFSQNECRC 135
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.321 0.138 0.439
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,952,916
Number of Sequences: 59808
Number of extensions: 467609
Number of successful extensions: 886
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 856
Number of HSP's gapped (non-prelim): 25
length of query: 241
length of database: 16,821,457
effective HSP length: 80
effective length of query: 161
effective length of database: 12,036,817
effective search space: 1937927537
effective search space used: 1937927537
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 59 (27.9 bits)
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