Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001009-TA|BGIBMGA001009-PA|IPR008940|Protein
prenyltransferase
(820 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_17007| Best HMM Match : VWA (HMM E-Value=4.6e-06) 36 0.099
SB_53200| Best HMM Match : Apolipoprotein (HMM E-Value=0.0069) 35 0.30
SB_37693| Best HMM Match : PHD (HMM E-Value=8.7e-35) 35 0.30
SB_38705| Best HMM Match : Ank (HMM E-Value=3.3e-05) 34 0.40
SB_9948| Best HMM Match : Autophagy_N (HMM E-Value=4.9) 33 0.70
SB_1943| Best HMM Match : Vicilin_N (HMM E-Value=0.67) 33 0.70
SB_42378| Best HMM Match : MgtC (HMM E-Value=1.8) 33 0.93
SB_30168| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 1.2
SB_25065| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 1.2
SB_12668| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 1.2
SB_6911| Best HMM Match : Ank (HMM E-Value=0) 32 2.1
SB_46754| Best HMM Match : zf-C2H2 (HMM E-Value=1.5e-29) 32 2.1
SB_31994| Best HMM Match : CPSase_L_chain (HMM E-Value=0) 31 3.7
SB_22143| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 3.7
SB_16761| Best HMM Match : PDZ (HMM E-Value=1.6e-08) 31 3.7
SB_45733| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 4.9
SB_10690| Best HMM Match : Pkinase (HMM E-Value=6.4e-08) 31 4.9
SB_34910| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 4.9
SB_3941| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 4.9
SB_52732| Best HMM Match : M (HMM E-Value=0.019) 30 6.5
SB_31815| Best HMM Match : Lipase_GDSL (HMM E-Value=0.0024) 30 6.5
SB_52783| Best HMM Match : FlaC_arch (HMM E-Value=0.53) 30 6.5
SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 8.6
SB_18384| Best HMM Match : HSBP1 (HMM E-Value=1.5) 30 8.6
>SB_17007| Best HMM Match : VWA (HMM E-Value=4.6e-06)
Length = 453
Score = 36.3 bits (80), Expect = 0.099
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 691 SQKLSATALSNIIELLSDVSDKSSERWTSVETALNKLKQEQATGVPSKPESISTLAEKAA 750
S +S T + II+ S KS+ ++E ALN ++EQ +GVPS I+ EKAA
Sbjct: 91 SALVSITDIRKIIQTQVKFSGKSTRTHLALENALNLFQREQRSGVPSTLVIITD--EKAA 148
Query: 751 SM 752
S+
Sbjct: 149 SL 150
>SB_53200| Best HMM Match : Apolipoprotein (HMM E-Value=0.0069)
Length = 246
Score = 34.7 bits (76), Expect = 0.30
Identities = 29/110 (26%), Positives = 51/110 (46%), Gaps = 1/110 (0%)
Query: 639 KLVERLLSALCNCYEYQEEDVKEKIRSAAESILKHGETLEQRDESRDQRSPVSQKLSATA 698
KL+E L +L + E + E + + ES+ E+LE DES D+ + +
Sbjct: 114 KLLESLHESLDESLDESLETLDESLETLDESLETLDESLETLDESLDESLETLDESLDES 173
Query: 699 LSNIIELLSDVSDKSSERWTSVETALNK-LKQEQATGVPSKPESISTLAE 747
L + E L + + E +++ +L++ L + T S ES+ TL E
Sbjct: 174 LETLDESLDESLETLDESLETLDESLDESLDESLETLDESLDESLETLDE 223
Score = 31.9 bits (69), Expect = 2.1
Identities = 25/106 (23%), Positives = 46/106 (43%)
Query: 642 ERLLSALCNCYEYQEEDVKEKIRSAAESILKHGETLEQRDESRDQRSPVSQKLSATALSN 701
ER L E +E ++ S ES+ E+LE DES D+ + T +
Sbjct: 5 ERXXXXLDESLETLDESLETLDESLDESLETLDESLETLDESLDESLETLDEPLETLDES 64
Query: 702 IIELLSDVSDKSSERWTSVETALNKLKQEQATGVPSKPESISTLAE 747
+ E L + + E +++ +L++ + + + ES+ TL E
Sbjct: 65 LDESLETLDESPDESLETLDESLDESLETLDESLETLHESLETLQE 110
Score = 30.7 bits (66), Expect = 4.9
Identities = 30/114 (26%), Positives = 48/114 (42%), Gaps = 3/114 (2%)
Query: 634 HAKRTKLVERLLSALCNCYEYQEEDVKEKIRSAAESILKHGETLEQRDESRDQRSPVSQK 693
H L E L L + +E +E + E + + ES+ E+LE DES + +
Sbjct: 102 HESLETLQESLEKLLESLHESLDESLDESLETLDESLETLDESLETLDESLETLDESLDE 161
Query: 694 LSATALSNIIELLSDVSDKSSERWTSVETALNKLKQEQATGVPSKPESISTLAE 747
T ++ E L + + E S+ET L+ + S ES+ TL E
Sbjct: 162 SLETLDESLDESLETLDESLDE---SLETLDESLETLDESLDESLDESLETLDE 212
Score = 30.3 bits (65), Expect = 6.5
Identities = 33/135 (24%), Positives = 57/135 (42%), Gaps = 6/135 (4%)
Query: 581 HAPFEKATEYLDTLIPNIYIPEPSVMEEIIRTLEVAGAGDRLAQAWSQIIVFGHAKRTKL 640
H E E L+ L+ +++ ++E + TL+ + L + + T L
Sbjct: 102 HESLETLQESLEKLLESLHESLDESLDESLETLD-----ESLETLDESLETLDESLET-L 155
Query: 641 VERLLSALCNCYEYQEEDVKEKIRSAAESILKHGETLEQRDESRDQRSPVSQKLSATALS 700
E L +L E +E ++ S ES+ E+LE DES D+ S + +L
Sbjct: 156 DESLDESLETLDESLDESLETLDESLDESLETLDESLETLDESLDESLDESLETLDESLD 215
Query: 701 NIIELLSDVSDKSSE 715
+E L + D+S E
Sbjct: 216 ESLETLDESLDESLE 230
Score = 29.9 bits (64), Expect = 8.6
Identities = 31/111 (27%), Positives = 51/111 (45%), Gaps = 4/111 (3%)
Query: 641 VERLLSALCNCYEYQEEDVKEKIRSAAESILKHGETLEQRDESRDQRSPVSQKLSATALS 700
+E L +L E +E E + + ES+ + ETL++ E+ + Q+ L
Sbjct: 58 LETLDESLDESLETLDESPDESLETLDESLDESLETLDESLETLHESLETLQESLEKLLE 117
Query: 701 NIIELLSDVSDKSSERWT-SVET---ALNKLKQEQATGVPSKPESISTLAE 747
++ E L + D+S E S+ET +L L + T S ES+ TL E
Sbjct: 118 SLHESLDESLDESLETLDESLETLDESLETLDESLETLDESLDESLETLDE 168
>SB_37693| Best HMM Match : PHD (HMM E-Value=8.7e-35)
Length = 2049
Score = 34.7 bits (76), Expect = 0.30
Identities = 32/103 (31%), Positives = 48/103 (46%), Gaps = 4/103 (3%)
Query: 678 EQRDESRDQRSPVSQKLSATALSNIIELLSDVSDKSSERWTSVETALNKLKQEQATGVPS 737
E+RDE Q S SQK A L N +L + + +SE + +LNK+ E+ TG
Sbjct: 1293 EKRDELVKQESVDSQKCDAETL-NSGKLKDEKCEFNSEIGIEKDDSLNKISPEENTGQKQ 1351
Query: 738 KPESISTLAEKAASMGKLEIAATAVAYLAECGFEEAAGASARV 780
E I T E+ + G I+ T V + GF+E ++
Sbjct: 1352 DME-IDTGMEEISENGNDLISVTKVEKVN--GFKEDCNGPEKI 1391
>SB_38705| Best HMM Match : Ank (HMM E-Value=3.3e-05)
Length = 252
Score = 34.3 bits (75), Expect = 0.40
Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Query: 660 KEKIRSAAESILKHGETLEQRDES--RDQRSPVSQKLSATA----LSNIIELLSDVSDKS 713
KE+ R A SI + + L+ +D RD+ P ++ A L+ ++E +D++ +
Sbjct: 26 KEEARGAEASIPEESQDLDIQDSDCKRDEELPFVHRVVADGNLELLTQLVENGTDINVRD 85
Query: 714 SERWTSVETALNKLKQEQAT 733
E W + TA+ K E AT
Sbjct: 86 REGWPPLHTAIKTGKSECAT 105
>SB_9948| Best HMM Match : Autophagy_N (HMM E-Value=4.9)
Length = 166
Score = 33.5 bits (73), Expect = 0.70
Identities = 18/59 (30%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 653 EYQEEDVKEKIRSAAESILKHGETLEQRDESRDQRSPVSQKLSATALSNIIELLSDVSD 711
E ED ++ S E K E+ E +DES D++ P S++LS ++ + + L+ + S+
Sbjct: 80 EKSREDFTQEADSTEEKKEKIDESEEDKDESEDEKDP-SEQLSNLSIESAVFLMKNTSN 137
>SB_1943| Best HMM Match : Vicilin_N (HMM E-Value=0.67)
Length = 695
Score = 33.5 bits (73), Expect = 0.70
Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 2/96 (2%)
Query: 636 KRTKLVERLLSALCNCYEYQEEDVKEKIRSAAESI-LKHGETLEQRDESRDQRSPVSQKL 694
K++ E+ L + C+E ED+ E+IR+ +S+ KH D RSP +
Sbjct: 447 KKSACGEKFLESSKKCWEDLSEDLGEEIRTCNKSLEAKHYYEKHTCDGENSGRSPNPMCI 506
Query: 695 SATALSNIIEL-LSDVSDKSSERWTSVETALNKLKQ 729
+ T++ ++ LSD +T+ E A + L+Q
Sbjct: 507 TKTSIDHVSGFPLSDWLGACYLGYTTRELACHNLEQ 542
>SB_42378| Best HMM Match : MgtC (HMM E-Value=1.8)
Length = 173
Score = 33.1 bits (72), Expect = 0.93
Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Query: 449 ACLRSISVWGGGIQLQNLAM-QLVAEFRELGIQPGLSAYYYLLCLFCKER--GPRNNILS 505
A L +I +W + L N+ + + + R L + GL+A +Y+L C +R P+N I
Sbjct: 26 AVLLNIGLWLVSVVLVNIVLLERLGRRRTLALLYGLTATFYMLLFICTKRKYNPQNAIQI 85
Query: 506 KILTDLESRER 516
I+ L R R
Sbjct: 86 IIIIILRPRPR 96
>SB_30168| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6863
Score = 32.7 bits (71), Expect = 1.2
Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Query: 634 HAKRTKLVERLLSALCNCYE-YQEED-VKEKIRSAAESILKHGETLEQRDESRDQRSPVS 691
+A+ KL +L++ L C E +++ D +K + S K ET Q ++ ++ S +S
Sbjct: 5272 YARLAKLNTQLVTELDRCNEEFKDLDALKNDLESVELLEKKLAETNNQFEDLEERSSEIS 5331
Query: 692 QKLSATALSNIIELLSDVS 710
+KL A + + + LSD+S
Sbjct: 5332 EKLPVEAQTELRKRLSDLS 5350
>SB_25065| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 161
Score = 32.7 bits (71), Expect = 1.2
Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 1/86 (1%)
Query: 625 AWSQIIVFGHAKRTKLVERLLSALCNCYEYQEEDVKEKIRSAAESILKHGETLEQRDESR 684
A + + +F H TK+ E C E ED +EK + L + +++++ R
Sbjct: 7 ATTSVAMFCHCCGTKISEENTKFCFACGEKLPEDGQEKASDVSSKKLTFADFRKKKEQER 66
Query: 685 DQRSPVSQKLSATALSNIIELLSDVS 710
+ PV++ A L N + L DV+
Sbjct: 67 SSKFPVAKSKKA-KLGNDPKQLQDVT 91
>SB_12668| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 511
Score = 32.7 bits (71), Expect = 1.2
Identities = 20/79 (25%), Positives = 36/79 (45%), Gaps = 3/79 (3%)
Query: 636 KRTKLVERLLSALCNCYEYQEEDVKEKIRSAAESILKHGETLEQRDESRDQRSPVSQKLS 695
+ KL + + L N YE + +IR+ A++++K E Q D+ D P +
Sbjct: 190 RMVKLTSDMNAVLKNLYEENKTSYSGRIRNLADAVIKVSEEHSQIDDDSD---PKGEMAD 246
Query: 696 ATALSNIIELLSDVSDKSS 714
+ I++L+ D SS
Sbjct: 247 LDVVQTIVDLVGAGFDTSS 265
>SB_6911| Best HMM Match : Ank (HMM E-Value=0)
Length = 1961
Score = 31.9 bits (69), Expect = 2.1
Identities = 30/116 (25%), Positives = 55/116 (47%), Gaps = 5/116 (4%)
Query: 631 VFGHAKRTKLVERLLSALCNCYEYQEEDVKEKIRSAAESILKHGETLEQRDE-SRDQRS- 688
V+GHA +L+E + N ++ +D + AE LK + LE RD S D+
Sbjct: 165 VWGHAAEQELLEHEANDAINSFKNLLKDPVFLLDPNAEDALKKIKDLENRDMISFDELDL 224
Query: 689 PVSQKLSATALSNIIELLSDVSDKSSERWTSVET---ALNKLKQEQATGVPSKPES 741
V + L ++ +I+ L ++S+ SE + T LN ++ + P+ P++
Sbjct: 225 KVIKDLVSSFKEDIVAKLDELSETRSEEDLQLLTKIIELNNTIEQLRSNFPATPDT 280
>SB_46754| Best HMM Match : zf-C2H2 (HMM E-Value=1.5e-29)
Length = 487
Score = 31.9 bits (69), Expect = 2.1
Identities = 32/123 (26%), Positives = 50/123 (40%), Gaps = 3/123 (2%)
Query: 662 KIRSAAESILKHGETLEQRDESRDQRSPVSQKLSATALSNIIELLSDVSDKSSERWTSVE 721
K S E I GE+ + R Q S +K A S + LSD S KSS++ +S
Sbjct: 248 KDSSEVERIRGAGESSSEPSSKRSQ-STKGRKNVNKAPSGVDGPLSDASGKSSKKASSKS 306
Query: 722 TALNKLKQEQATG--VPSKPESISTLAEKAASMGKLEIAATAVAYLAECGFEEAAGASAR 779
+ K+K+ T P + S+ + K E ++T+ L + A
Sbjct: 307 PKVTKVKESSITSQKAPKSSKQSSSKSTKGTKKRVEEASSTSQKALPLMTVGGHSSKEAE 366
Query: 780 VLG 782
+LG
Sbjct: 367 ILG 369
>SB_31994| Best HMM Match : CPSase_L_chain (HMM E-Value=0)
Length = 945
Score = 31.1 bits (67), Expect = 3.7
Identities = 26/106 (24%), Positives = 41/106 (38%), Gaps = 1/106 (0%)
Query: 396 IEKGIPLSTGVYNALLGCIGFLREGATLRIEALKSTLMQMNEQGLSPNIETLSACLRSIS 455
+ +G +ST Y+ ++ + E + LK +L + N GL NI L++ S
Sbjct: 465 VRQGDQVST-YYDPMIAKLVVWSETRPSALRLLKESLKKYNVVGLETNISFLTSLCDHNS 523
Query: 456 VWGGGIQLQNLAMQLVAEFRELGIQPGLSAYYYLLCLFCKERGPRN 501
G + + + F G PG L L ER RN
Sbjct: 524 FQAGDVHTDFIKQHMADLFPAKGSMPGDDVAQAGLALLLLEREQRN 569
>SB_22143| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1995
Score = 31.1 bits (67), Expect = 3.7
Identities = 29/134 (21%), Positives = 57/134 (42%), Gaps = 5/134 (3%)
Query: 626 WSQIIVFGHAKRTKLVERLLSALCNCYEYQEEDVKEKIRSAAESILKH---GETLEQRDE 682
W + + G K + +L + +C E + DV++K ++A +++ H L+Q ++
Sbjct: 1007 WLEEKLPGEQKLPPALSTILPPMYSCLEDRNGDVRKKAQAAVPAVMAHLGYDVMLKQANK 1066
Query: 683 SRDQRSPVSQKLSATALSNIIELLSDVSDKSSERWTS-VETALNKLKQEQATGVPSK-PE 740
+ PV + + E + SS+ +S E+A A PSK P+
Sbjct: 1067 LKPASKPVVVGILEKLRGTVPEPAKSATKASSKSASSKTESASTTSATPAANSGPSKRPK 1126
Query: 741 SISTLAEKAASMGK 754
S +++ A K
Sbjct: 1127 SAVQSSKQPAKTSK 1140
>SB_16761| Best HMM Match : PDZ (HMM E-Value=1.6e-08)
Length = 889
Score = 31.1 bits (67), Expect = 3.7
Identities = 51/222 (22%), Positives = 87/222 (39%), Gaps = 23/222 (10%)
Query: 605 VMEEIIRTLEVAGAGDRLAQAWSQIIVFGHAKRTKL--VERLLSALCNCYEYQEEDVKEK 662
V+ E R LE G R A W + + T+L V+ L E E+ +K +
Sbjct: 166 VVAERDRALEEWG---RAATKWDSTLDQVDSVMTELSKVKAQRDELLLQIEKSEDSIKME 222
Query: 663 IRSAAESILKHGETLEQRDESRDQRSPVSQKLSATALSNIIELLSDVSDKSSERWTSVET 722
I S E +L+ Q + ++ Q+ + T+++ + D + E+W
Sbjct: 223 IDSR-EKLLEQQLQKTQTELAKAQQRCLELDAKLTSITEKSDTYHKERDHAKEQWRHSVK 281
Query: 723 ALNKLKQEQATGVPSKPESISTLAEKAASMGKLE---------IAATAVAY--------L 765
KL +E A V ++ E+I A + KL+ +A T +A L
Sbjct: 282 ERKKLHREMAATVQARDEAIQKCFSTAEQLDKLKEDYNRLLNRLARTGIASGSESSTCSL 341
Query: 766 AECGFEEAAGASARVLGAMLNRPEEEVRALLQEPAGALAGSL 807
+C F + +LGA L R + ++ GA+ G L
Sbjct: 342 KDCQFCSDSFGKEVILGARLVRCTVMLHCMVWSIIGAVWGRL 383
>SB_45733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 806
Score = 30.7 bits (66), Expect = 4.9
Identities = 34/139 (24%), Positives = 63/139 (45%), Gaps = 9/139 (6%)
Query: 659 VKEKIRSAAESILKHGETLEQRDESRDQ--RSPVSQKL-SATALSNIIELLSDVS-DKSS 714
VKEK+R ES L +TL + E R Q +S + +++ SA + ++ SD S + +
Sbjct: 344 VKEKLREEQESRLTFEKTLREEMERRWQSLKSYMDEEIQSARGTEKLTQVRSDQSLARLN 403
Query: 715 ERWTSVETALNK----LKQEQATGVPSKPESISTLAEKAASM-GKLEIAATAVAYLAECG 769
E + +E + + ++Q + S+ L+ + M KL +A + + +
Sbjct: 404 EAISILERQMEEGRKAVEQVLHAEITSRQSQHDKLSSRFKDMQDKLNLAISTIKLIDTVD 463
Query: 770 FEEAAGASARVLGAMLNRP 788
E V A++NRP
Sbjct: 464 LEGGPVGKPVVPAALMNRP 482
>SB_10690| Best HMM Match : Pkinase (HMM E-Value=6.4e-08)
Length = 865
Score = 30.7 bits (66), Expect = 4.9
Identities = 25/105 (23%), Positives = 47/105 (44%), Gaps = 4/105 (3%)
Query: 640 LVERLLSALCNCYEYQEEDVKEKIRSAAESILKHGETLEQRDESRDQRSPVSQKLSATAL 699
L++RL + + E +D KE+ +S + + E+R+ S RS +K +++
Sbjct: 238 LIKRLQTIASSTTEELSKDGKERSKSKDQ---EKSTPRERRNSSSHHRSSSREKDRKSSM 294
Query: 700 SNIIELLSDVSDKSSER-WTSVETALNKLKQEQATGVPSKPESIS 743
I S DK S R W+ + +KL+++ P+ S
Sbjct: 295 DKSIRSSSRDRDKKSRRSWSKSKERDSKLREKTMVAPSKSPDRSS 339
>SB_34910| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2147
Score = 30.7 bits (66), Expect = 4.9
Identities = 30/124 (24%), Positives = 47/124 (37%), Gaps = 3/124 (2%)
Query: 675 ETLEQRDESRDQRSPVSQKLSATALSNIIELLSDVSDKSSERWTSVETALNKLKQEQATG 734
E+ + S Q SP SQ SAT S ++ S + S + TSV + + Q T
Sbjct: 1306 ESRSSQVTSATQESPSSQVTSATQESRYSQVTSVTQEPPSSQVTSV---TQESRSSQVTS 1362
Query: 735 VPSKPESISTLAEKAASMGKLEIAATAVAYLAECGFEEAAGASARVLGAMLNRPEEEVRA 794
V + S + S +AT + S++V A P +V +
Sbjct: 1363 VTQESRSSQVTSVTQESRSSQVTSATQEPPSTQVTSVTQESPSSQVTSATQEPPSTQVTS 1422
Query: 795 LLQE 798
+ QE
Sbjct: 1423 VTQE 1426
>SB_3941| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 517
Score = 30.7 bits (66), Expect = 4.9
Identities = 34/105 (32%), Positives = 49/105 (46%), Gaps = 9/105 (8%)
Query: 641 VERLLSALCNCYEYQEEDVKEKIRSAAESILK----HGETLEQ---RDESRDQRSPVSQK 693
V + +S+L + + E +K K SAAE+ILK GE EQ ++S R S
Sbjct: 181 VAKKISSLTSKVTSEFELIKNKSTSAAETILKILGELGEIKEQLVYTEQSLTSRITQSPC 240
Query: 694 LSATALSNI-IELLSDV-SDKSSERWTSVETALNKLKQEQATGVP 736
L+ T S I + D+ S K S+R + L+ E GVP
Sbjct: 241 LNQTEGSTIEVTSPQDMNSHKDSQRIIDTKNRFETLQDEVQPGVP 285
>SB_52732| Best HMM Match : M (HMM E-Value=0.019)
Length = 1366
Score = 30.3 bits (65), Expect = 6.5
Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 357 ITEVRELLWDKGHVLYKDRDGKLKAWQE--AERAYELSQEAIEKGI 400
+T V+E + D+ L+ DRD ++K ++ ERA+E QE E+ I
Sbjct: 1244 MTSVKERIVDELTNLFTDRDTRVKELEQMIEERAHEYGQEIEERNI 1289
>SB_31815| Best HMM Match : Lipase_GDSL (HMM E-Value=0.0024)
Length = 1163
Score = 30.3 bits (65), Expect = 6.5
Identities = 25/121 (20%), Positives = 55/121 (45%), Gaps = 4/121 (3%)
Query: 637 RTKLVERLLSALCNCYEYQEEDVKEKIRSAAESILKHGETLEQRDESRDQRSPVSQKLSA 696
+ K+ L +C E Q + +K +I + + + K L + S + V K ++
Sbjct: 299 KQKIKNGLSDVKMHC-ESQIDSLKFEISESIKDVAKQVSNLSNKVTS--EFKSVKNKSAS 355
Query: 697 TALSNIIELLSDVSDKSSERWTSVETALNKLKQEQATGVPSKPESISTLAEKAASMGKLE 756
TA I+++L D+ + + + ET + Q+T + E+I +++ + ++E
Sbjct: 356 TA-ETILKILGDLGEIKDQLLKTEETVAQIHETTQSTHSREQTEAIEVCSQETSESHRIE 414
Query: 757 I 757
I
Sbjct: 415 I 415
>SB_52783| Best HMM Match : FlaC_arch (HMM E-Value=0.53)
Length = 300
Score = 30.3 bits (65), Expect = 6.5
Identities = 25/121 (20%), Positives = 55/121 (45%), Gaps = 4/121 (3%)
Query: 637 RTKLVERLLSALCNCYEYQEEDVKEKIRSAAESILKHGETLEQRDESRDQRSPVSQKLSA 696
+ K+ L +C E Q + +K +I + + + K L + S + V K ++
Sbjct: 176 KQKIKNGLSDVKMHC-ESQIDSLKFEISESIKDVAKQVSNLSNKVTS--EFKSVKNKSAS 232
Query: 697 TALSNIIELLSDVSDKSSERWTSVETALNKLKQEQATGVPSKPESISTLAEKAASMGKLE 756
TA I+++L D+ + + + ET + Q+T + E+I +++ + ++E
Sbjct: 233 TA-ETILKILDDLGEIKDQLLKTEETVAQIHETTQSTHSREQTEAIEVCSQETSESHRIE 291
Query: 757 I 757
I
Sbjct: 292 I 292
>SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2520
Score = 29.9 bits (64), Expect = 8.6
Identities = 26/124 (20%), Positives = 53/124 (42%), Gaps = 4/124 (3%)
Query: 635 AKRTKLVERLLSALCNCYEYQEEDVKEKIRSAAESILKHGETLEQRDES--RDQRSPVSQ 692
AK K + ++ L + E E + KH LE R++ D++S +++
Sbjct: 391 AKLKKAHQNKITELTETIKKAEHKAVESEKQRKLENEKHSMELEAREKDLLSDKQSELAR 450
Query: 693 --KLSATALSNIIELLSDVSDKSSERWTSVETALNKLKQEQATGVPSKPESISTLAEKAA 750
K + + + +++ ++ K SE+ T KLK + + K E++ K A
Sbjct: 451 VSKRMESKTNEMKKIVKELRAKLSEKETLANDLEQKLKALEDRSITEKSEAVLLFESKLA 510
Query: 751 SMGK 754
++ K
Sbjct: 511 TLNK 514
>SB_18384| Best HMM Match : HSBP1 (HMM E-Value=1.5)
Length = 1072
Score = 29.9 bits (64), Expect = 8.6
Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 14/96 (14%)
Query: 351 IDTERLITEVRELLWDKGHVLYKDRDGKLKAWQEAE-RAYELSQEA---IEKGIPLSTGV 406
+DTE+ + E D L ++DG KAW A + ++ E + + LS V
Sbjct: 41 MDTEKKVDED-----DDTDDLETEQDGN-KAWISAVFKGLKIGGEVANLVVSAVSLSAAV 94
Query: 407 YNALLGCIGFLREGATL----RIEALKSTLMQMNEQ 438
Y A+ GC G L+E + EALK+ + +++ Q
Sbjct: 95 YKAVHGCCGELQEPELCEYEKQFEALKTEIQELSVQ 130
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.317 0.132 0.382
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,672,756
Number of Sequences: 59808
Number of extensions: 1018425
Number of successful extensions: 5890
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 5854
Number of HSP's gapped (non-prelim): 56
length of query: 820
length of database: 16,821,457
effective HSP length: 88
effective length of query: 732
effective length of database: 11,558,353
effective search space: 8460714396
effective search space used: 8460714396
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 64 (29.9 bits)
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