Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001009-TA|BGIBMGA001009-PA|IPR008940|Protein
prenyltransferase
(820 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006708-24|AAF60413.1| 660|Caenorhabditis elegans Hypothetical... 99 6e-21
AF003136-10|AAK21378.2| 1281|Caenorhabditis elegans High inciden... 38 0.022
AF125962-2|AAY86293.1| 232|Caenorhabditis elegans Hypothetical ... 38 0.038
Z83113-10|CAI46598.1| 556|Caenorhabditis elegans Hypothetical p... 33 0.62
Z83113-9|CAB05548.2| 497|Caenorhabditis elegans Hypothetical pr... 33 0.62
Z73975-5|CAA98278.2| 556|Caenorhabditis elegans Hypothetical pr... 33 0.62
Z73975-4|CAA98279.2| 497|Caenorhabditis elegans Hypothetical pr... 33 0.62
AC024776-11|AAK68461.1| 349|Caenorhabditis elegans Hypothetical... 33 1.1
Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical pr... 32 1.4
Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical pr... 32 1.4
D83173-1|BAA11828.1| 1518|Caenorhabditis elegans laminin A protein. 32 1.4
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 32 1.4
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 32 1.4
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 32 1.4
AL132860-2|CAB60512.1| 117|Caenorhabditis elegans Hypothetical ... 32 1.4
AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha... 32 1.4
AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha... 32 1.4
U97592-1|AAB52871.3| 638|Caenorhabditis elegans Temporarily ass... 32 1.9
U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical pr... 31 2.5
AF039051-2|AAB94262.1| 413|Caenorhabditis elegans Nuclear hormo... 31 3.3
U41510-8|AAK39385.1| 493|Caenorhabditis elegans Hypothetical pr... 31 4.4
AC025716-14|AAK39603.1| 227|Caenorhabditis elegans Hypothetical... 31 4.4
Z75951-1|CAB00091.2| 408|Caenorhabditis elegans Hypothetical pr... 30 7.6
U64854-6|AAB18318.2| 5079|Caenorhabditis elegans Uncoordinated p... 30 7.6
D45899-1|BAA08309.1| 5071|Caenorhabditis elegans ryanodine recep... 30 7.6
AL032632-14|CAA21593.1| 344|Caenorhabditis elegans Hypothetical... 30 7.6
AL022273-1|CAA18356.1| 344|Caenorhabditis elegans Hypothetical ... 30 7.6
>AC006708-24|AAF60413.1| 660|Caenorhabditis elegans Hypothetical
protein Y110A7A.19 protein.
Length = 660
Score = 99 bits (238), Expect = 6e-21
Identities = 74/244 (30%), Positives = 116/244 (47%), Gaps = 22/244 (9%)
Query: 15 KCLCRSLVSIESQKTPQSGASSDGISPPVRIQRGPTDILQALSTTVGIDPTAAHYKYHDD 74
+ + RSL S+E A S ++ I+R PTD+L ALS TVG D TA H+ Y DD
Sbjct: 5 RVITRSLSSVEP-------ALSQKLTIQPAIERSPTDLLNALSETVGPDTTAPHFAYIDD 57
Query: 75 PYLIPLSNYRKRAYALAAEAGRKAAIWIRDEHADLFTTRIWDPPLRKKTPYYNADPKIEA 134
P IP + K+ Y +A E G++AA + E LF P L P + ADP
Sbjct: 58 PITIPSTQSTKKTYFMAKEFGKRAARELATEWPTLFAFDRDQPQLPVFRPRHLADPL--- 114
Query: 135 FSPKPIYNDESKVTEEDLIYTIQNALIEDSIKVYQLLGGSQ-GVSDEXXXXXXXXXCFYN 193
+ + TE +L+ I + ++DS +Y+ + VS++ +YN
Sbjct: 115 ---------QVEPTENNLLKMISSREVKDSCILYERMRSENVDVSEKVQLELFRLVTYYN 165
Query: 194 EKEPDSVEWLEERWFSANTRERQAATWRLGSLADTIFTSMEPKSPEAYCAIIQGMAKYYQ 253
EW EE N E ++W+ G++AD +F ++ PK+ E +I G+ K+
Sbjct: 166 SSNVPFAEW-EEFVGMRNFGEDSTSSWKSGAVADLLFETL-PKTDETVSIMIAGLCKFSD 223
Query: 254 NKSV 257
+ S+
Sbjct: 224 HSSL 227
Score = 43.2 bits (97), Expect = 8e-04
Identities = 77/396 (19%), Positives = 164/396 (41%), Gaps = 35/396 (8%)
Query: 429 KSTLMQMNEQGLSPNIETLSACLRSISVWGGGIQLQNLAMQLVAEFRELGIQPGLSAYYY 488
K + +M ++P+I T +A L S + G +++ E +E+G++P LS+++
Sbjct: 262 KKLVAEMISLRMTPDIFTFNALLSSAAKAGKFEDRVKAFTEIIGEMKEIGVEPALSSFHL 321
Query: 489 LLCLFC-------------KERGPRNNILSKILTDLE------SRERLEVNEPTDTNFFI 529
++ +++ N+ L+ ++ L + + L+ T FF+
Sbjct: 322 IIKNIIDFKLLDNEKRESDEQKKTYNHQLTVAISWLNEIQNSLTGKTLKPITSTCNLFFV 381
Query: 530 TAMGVCSDHLQDINMAERVHALL-MKNNNYKLVGDAYKESIYYRHLVTVACRHAPFEKAT 588
AMG+ + N+AE + ++ K N K+ + Y R L + A +
Sbjct: 382 EAMGI-HYRAANENLAENLVSIYESKANEVKMPAFTIESMFYNRQLQLAVEQSASLNRIY 440
Query: 589 EYLDTLIPNIYIPEPSVMEEIIRTLEVAGAGDRLAQAWSQIIVFGHA---KRTKLVERLL 645
+ T++P + + + R L A + DR ++I+ G A + E +
Sbjct: 441 DLYTTMVPRLVGVNNYLSSLVFRKL--AASSDRHWPLLRRVIIDGIAAGQMNGVIGEEMR 498
Query: 646 SALCNCYEYQ-EEDVKEKIRSAAESILKHGETLEQRDESRDQRSPVSQKLSATALSNIIE 704
LCN + +E+ S + ++ Q E R +R + +KLS + +S
Sbjct: 499 KQLCNVQLHTLGTSEREQFTSLVQKLVAVWVEFSQFTEERMRR--LQRKLSPSQISECAL 556
Query: 705 LLSDVSDKSSERWTSVETALNKLKQ--EQATGVP---SKPESISTLAEKAASMGKLEIAA 759
LL+ + ++ + + ++ L++ ++AT P ++P +++ L E A AA
Sbjct: 557 LLTRIGEQ-QKAYELLDLLLDETASSGDEATVYPRGHARPWAMAELFEDALRKRDTYAAA 615
Query: 760 TAVAYLAECGFEEAAGASARVLGAMLNRPEEEVRAL 795
T + ++ A + N +E+VR +
Sbjct: 616 TCLQIMSLTANRAKLEPLANRIFEKCNVNQEQVRII 651
>AF003136-10|AAK21378.2| 1281|Caenorhabditis elegans High incidence
of males (increasedx chromosome loss) protein 1, isoform
a protein.
Length = 1281
Score = 38.3 bits (85), Expect = 0.022
Identities = 26/104 (25%), Positives = 53/104 (50%), Gaps = 2/104 (1%)
Query: 655 QEEDVKEKIRSAAESILKHGETLEQRDESRDQRSPVSQKLSA--TALSNIIELLSDVSDK 712
Q +D+K+K ++AA ++ +H E++EQ E +++ +S KL + I ++ K
Sbjct: 862 QYKDMKKKEKTAAAALKEHTESMEQDKEVLEEKKALSHKLETEWNEVKKIAQVAMKDFTK 921
Query: 713 SSERWTSVETALNKLKQEQATGVPSKPESISTLAEKAASMGKLE 756
+ + +E+ L K + E+ + + S L K+ SM +E
Sbjct: 922 AEKELLRLESLLTKKQYERHSLLHSVKLGQIALPLKSGSMADVE 965
>AF125962-2|AAY86293.1| 232|Caenorhabditis elegans Hypothetical
protein Y39H10B.2 protein.
Length = 232
Score = 37.5 bits (83), Expect = 0.038
Identities = 28/100 (28%), Positives = 55/100 (55%), Gaps = 6/100 (6%)
Query: 656 EEDVKEKIRSAAESILKHGE--TLEQRDESRDQRSPVSQKLSATALSNIIELLSDVSDKS 713
++D E+ R+ A++ L + E TL Q+ + + S SQ+ + L I+EL D++
Sbjct: 101 KDDADER-RNRAQTSLDNSEYETLVQQRQKLIENSEKSQQETKEQLEKIVELQRKSCDQN 159
Query: 714 SERWTSVETAL---NKLKQEQATGVPSKPESISTLAEKAA 750
E++T++E L N+ Q+Q + +K E ++ +KA+
Sbjct: 160 KEKFTALELQLQETNERMQKQLDELNAKFEDVNRKLQKAS 199
>Z83113-10|CAI46598.1| 556|Caenorhabditis elegans Hypothetical
protein K08H10.2b protein.
Length = 556
Score = 33.5 bits (73), Expect = 0.62
Identities = 35/152 (23%), Positives = 61/152 (40%), Gaps = 9/152 (5%)
Query: 657 EDVKEKIRSAAESILKHGETLEQRDESRDQRSPVSQKLSATALSNIIELLSDVSDKSSER 716
E K+K A ES K GE E D +++ K+ A A + DV D + E
Sbjct: 250 EQAKDKASDAVESAKKQGE--ETSDAAKEHADHAKGKI-ADAWDATKDKADDVKDTAGET 306
Query: 717 WTSVETALNKLKQEQATGVPSKPESISTLAEKAASMGKLEIAATAVAYLAECGFEEAAGA 776
+ ++ + E + ++ S AE K I TA +A E+ GA
Sbjct: 307 FENIHHSATTAVDEARENAAAAKDNASESAEST----KYSIVDTAKG-IAHSAEEKLEGA 361
Query: 777 SARVLGAMLNRPEEEVRALLQEPAGALAGSLH 808
A V+G + + + + A +++ ++H
Sbjct: 362 -ASVVGDAVQYVNDSATSAVSTVADSVSSAVH 392
>Z83113-9|CAB05548.2| 497|Caenorhabditis elegans Hypothetical
protein K08H10.2a protein.
Length = 497
Score = 33.5 bits (73), Expect = 0.62
Identities = 35/152 (23%), Positives = 61/152 (40%), Gaps = 9/152 (5%)
Query: 657 EDVKEKIRSAAESILKHGETLEQRDESRDQRSPVSQKLSATALSNIIELLSDVSDKSSER 716
E K+K A ES K GE E D +++ K+ A A + DV D + E
Sbjct: 250 EQAKDKASDAVESAKKQGE--ETSDAAKEHADHAKGKI-ADAWDATKDKADDVKDTAGET 306
Query: 717 WTSVETALNKLKQEQATGVPSKPESISTLAEKAASMGKLEIAATAVAYLAECGFEEAAGA 776
+ ++ + E + ++ S AE K I TA +A E+ GA
Sbjct: 307 FENIHHSATTAVDEARENAAAAKDNASESAEST----KYSIVDTAKG-IAHSAEEKLEGA 361
Query: 777 SARVLGAMLNRPEEEVRALLQEPAGALAGSLH 808
A V+G + + + + A +++ ++H
Sbjct: 362 -ASVVGDAVQYVNDSATSAVSTVADSVSSAVH 392
>Z73975-5|CAA98278.2| 556|Caenorhabditis elegans Hypothetical
protein K08H10.2b protein.
Length = 556
Score = 33.5 bits (73), Expect = 0.62
Identities = 35/152 (23%), Positives = 61/152 (40%), Gaps = 9/152 (5%)
Query: 657 EDVKEKIRSAAESILKHGETLEQRDESRDQRSPVSQKLSATALSNIIELLSDVSDKSSER 716
E K+K A ES K GE E D +++ K+ A A + DV D + E
Sbjct: 250 EQAKDKASDAVESAKKQGE--ETSDAAKEHADHAKGKI-ADAWDATKDKADDVKDTAGET 306
Query: 717 WTSVETALNKLKQEQATGVPSKPESISTLAEKAASMGKLEIAATAVAYLAECGFEEAAGA 776
+ ++ + E + ++ S AE K I TA +A E+ GA
Sbjct: 307 FENIHHSATTAVDEARENAAAAKDNASESAEST----KYSIVDTAKG-IAHSAEEKLEGA 361
Query: 777 SARVLGAMLNRPEEEVRALLQEPAGALAGSLH 808
A V+G + + + + A +++ ++H
Sbjct: 362 -ASVVGDAVQYVNDSATSAVSTVADSVSSAVH 392
>Z73975-4|CAA98279.2| 497|Caenorhabditis elegans Hypothetical
protein K08H10.2a protein.
Length = 497
Score = 33.5 bits (73), Expect = 0.62
Identities = 35/152 (23%), Positives = 61/152 (40%), Gaps = 9/152 (5%)
Query: 657 EDVKEKIRSAAESILKHGETLEQRDESRDQRSPVSQKLSATALSNIIELLSDVSDKSSER 716
E K+K A ES K GE E D +++ K+ A A + DV D + E
Sbjct: 250 EQAKDKASDAVESAKKQGE--ETSDAAKEHADHAKGKI-ADAWDATKDKADDVKDTAGET 306
Query: 717 WTSVETALNKLKQEQATGVPSKPESISTLAEKAASMGKLEIAATAVAYLAECGFEEAAGA 776
+ ++ + E + ++ S AE K I TA +A E+ GA
Sbjct: 307 FENIHHSATTAVDEARENAAAAKDNASESAEST----KYSIVDTAKG-IAHSAEEKLEGA 361
Query: 777 SARVLGAMLNRPEEEVRALLQEPAGALAGSLH 808
A V+G + + + + A +++ ++H
Sbjct: 362 -ASVVGDAVQYVNDSATSAVSTVADSVSSAVH 392
>AC024776-11|AAK68461.1| 349|Caenorhabditis elegans Hypothetical
protein Y41D4B.11 protein.
Length = 349
Score = 32.7 bits (71), Expect = 1.1
Identities = 22/88 (25%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 653 EYQEEDVKEKIRSAAESILKHGETLEQRDESRDQRSPVSQKLSATALSNIIELLSDVSDK 712
E ++ +++ KI+ A + + LE+ ++ ++Q+ +K+ AL E S D+
Sbjct: 145 EQEKREIENKIKEARKKREQEARRLEEVEKLKEQKKAEKRKMK-EALEKEEEEESFDEDE 203
Query: 713 SSERWTSVETALNKLKQEQATGVPSKPE 740
SE+ +E + K E+AT SK +
Sbjct: 204 VSEKRAKIEKSTEKGGSEKATTKLSKKD 231
>Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical protein
K08C7.3b protein.
Length = 3672
Score = 32.3 bits (70), Expect = 1.4
Identities = 29/128 (22%), Positives = 52/128 (40%), Gaps = 4/128 (3%)
Query: 657 EDVKEKIRSAAESILKHGETLEQRDESRDQRSPVSQKLSATALSNII-ELLSDVS--DKS 713
++ K +I +A E++ E +RD+ P K ALS + + L + K
Sbjct: 2493 KNAKAQIDNAYEALSAEPAFAESVQNARDKPFPDETKEKIDALSKTVSQDLKETEKLKKQ 2552
Query: 714 SERWTSVETALNKLKQEQATGVPS-KPESISTLAEKAASMGKLEIAATAVAYLAECGFEE 772
E+ T + L K K+ G+P ++ ++ EK + KL+ A E
Sbjct: 2553 LEQLTELSEKLRKRKEAVKAGIPKYSKNTLDSIDEKVQEVEKLKAEIDANIEETRAKISE 2612
Query: 773 AAGASARV 780
AG + +
Sbjct: 2613 IAGKAEEI 2620
>Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical protein
K08C7.3a protein.
Length = 3704
Score = 32.3 bits (70), Expect = 1.4
Identities = 29/128 (22%), Positives = 52/128 (40%), Gaps = 4/128 (3%)
Query: 657 EDVKEKIRSAAESILKHGETLEQRDESRDQRSPVSQKLSATALSNII-ELLSDVS--DKS 713
++ K +I +A E++ E +RD+ P K ALS + + L + K
Sbjct: 2493 KNAKAQIDNAYEALSAEPAFAESVQNARDKPFPDETKEKIDALSKTVSQDLKETEKLKKQ 2552
Query: 714 SERWTSVETALNKLKQEQATGVPS-KPESISTLAEKAASMGKLEIAATAVAYLAECGFEE 772
E+ T + L K K+ G+P ++ ++ EK + KL+ A E
Sbjct: 2553 LEQLTELSEKLRKRKEAVKAGIPKYSKNTLDSIDEKVQEVEKLKAEIDANIEETRAKISE 2612
Query: 773 AAGASARV 780
AG + +
Sbjct: 2613 IAGKAEEI 2620
>D83173-1|BAA11828.1| 1518|Caenorhabditis elegans laminin A protein.
Length = 1518
Score = 32.3 bits (70), Expect = 1.4
Identities = 29/128 (22%), Positives = 52/128 (40%), Gaps = 4/128 (3%)
Query: 657 EDVKEKIRSAAESILKHGETLEQRDESRDQRSPVSQKLSATALSNII-ELLSDVS--DKS 713
++ K +I +A E++ E +RD+ P K ALS + + L + K
Sbjct: 307 KNAKAQIDNAYEALSAEPAFAESVQNARDKPFPDETKEKIDALSKTVSQDLKETEKLKKQ 366
Query: 714 SERWTSVETALNKLKQEQATGVPS-KPESISTLAEKAASMGKLEIAATAVAYLAECGFEE 772
E+ T + L K K+ G+P ++ ++ EK + KL+ A E
Sbjct: 367 LEQLTELSEKLRKRKEAVKAGIPKYSKNTLDSIDEKVQEVEKLKAEIDANIEETRAKISE 426
Query: 773 AAGASARV 780
AG + +
Sbjct: 427 IAGKAEEI 434
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 32.3 bits (70), Expect = 1.4
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Query: 583 PFEKATEYLDTLIPNIYIPEPSVMEEIIRTLEVAGAGDRLAQAWSQ 628
P E T L+T IP + + + + EE+ R E+ ++ AQ W Q
Sbjct: 1226 PIEAVTHVLETSIPKVVVEQDAKEEEVRRAAEI--ISEQFAQLWVQ 1269
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 32.3 bits (70), Expect = 1.4
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Query: 583 PFEKATEYLDTLIPNIYIPEPSVMEEIIRTLEVAGAGDRLAQAWSQ 628
P E T L+T IP + + + + EE+ R E+ ++ AQ W Q
Sbjct: 1226 PIEAVTHVLETSIPKVVVEQDAKEEEVRRAAEI--ISEQFAQLWVQ 1269
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 32.3 bits (70), Expect = 1.4
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Query: 583 PFEKATEYLDTLIPNIYIPEPSVMEEIIRTLEVAGAGDRLAQAWSQ 628
P E T L+T IP + + + + EE+ R E+ ++ AQ W Q
Sbjct: 1226 PIEAVTHVLETSIPKVVVEQDAKEEEVRRAAEI--ISEQFAQLWVQ 1269
>AL132860-2|CAB60512.1| 117|Caenorhabditis elegans Hypothetical
protein Y56A3A.3 protein.
Length = 117
Score = 32.3 bits (70), Expect = 1.4
Identities = 18/39 (46%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 780 VLGAMLNRPEEEVRALLQEPAGAL-AGSLHPAALAVLHS 817
VLG +LN+PE+ + E G L AG+ PA AVL S
Sbjct: 27 VLGKLLNKPEQYMCIHFHEDQGILYAGTTEPAGFAVLKS 65
>AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3704
Score = 32.3 bits (70), Expect = 1.4
Identities = 29/128 (22%), Positives = 52/128 (40%), Gaps = 4/128 (3%)
Query: 657 EDVKEKIRSAAESILKHGETLEQRDESRDQRSPVSQKLSATALSNII-ELLSDVS--DKS 713
++ K +I +A E++ E +RD+ P K ALS + + L + K
Sbjct: 2493 KNAKAQIDNAYEALSAEPAFAESVQNARDKPFPDETKEKIDALSKTVSQDLKETEKLKKQ 2552
Query: 714 SERWTSVETALNKLKQEQATGVPS-KPESISTLAEKAASMGKLEIAATAVAYLAECGFEE 772
E+ T + L K K+ G+P ++ ++ EK + KL+ A E
Sbjct: 2553 LEQLTELSEKLRKRKEAVKAGIPKYSKNTLDSIDEKVQEVEKLKAEIDANIEETRAKISE 2612
Query: 773 AAGASARV 780
AG + +
Sbjct: 2613 IAGKAEEI 2620
>AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha
protein.
Length = 3704
Score = 32.3 bits (70), Expect = 1.4
Identities = 29/128 (22%), Positives = 52/128 (40%), Gaps = 4/128 (3%)
Query: 657 EDVKEKIRSAAESILKHGETLEQRDESRDQRSPVSQKLSATALSNII-ELLSDVS--DKS 713
++ K +I +A E++ E +RD+ P K ALS + + L + K
Sbjct: 2493 KNAKAQIDNAYEALSAEPAFAESVQNARDKPFPDETKEKIDALSKTVSQDLKETEKLKKQ 2552
Query: 714 SERWTSVETALNKLKQEQATGVPS-KPESISTLAEKAASMGKLEIAATAVAYLAECGFEE 772
E+ T + L K K+ G+P ++ ++ EK + KL+ A E
Sbjct: 2553 LEQLTELSEKLRKRKEAVKAGIPKYSKNTLDSIDEKVQEVEKLKAEIDANIEETRAKISE 2612
Query: 773 AAGASARV 780
AG + +
Sbjct: 2613 IAGKAEEI 2620
>U97592-1|AAB52871.3| 638|Caenorhabditis elegans Temporarily
assigned gene nameprotein 150, isoform b protein.
Length = 638
Score = 31.9 bits (69), Expect = 1.9
Identities = 22/52 (42%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Query: 416 FLREGATLRIEALKSTLMQMNEQGLSPNIETLSACLRSISVWGGGIQLQNLA 467
F+ EG L IE LK T MN+ L IET S L I G I+ +LA
Sbjct: 131 FIEEGTNLNIEFLKDTTSPMNQLLLLTTIET-STLLNLIEERIGDIRRMSLA 181
>U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical
protein C16C8.13 protein.
Length = 244
Score = 31.5 bits (68), Expect = 2.5
Identities = 25/94 (26%), Positives = 44/94 (46%), Gaps = 6/94 (6%)
Query: 661 EKIRSAAESILKHGET--LEQRDESRDQRSPVSQKLSATALSNIIELLSDVSDKSSERWT 718
E ++ + K ET L+++DE D+ QK+ AT I +L++ SDK+ E
Sbjct: 73 ESVKKETSDMKKQQETQILKRQDEYHDEMKQEFQKIQATQNKLIEDLMN--SDKNLEMML 130
Query: 719 SVETALNK--LKQEQATGVPSKPESISTLAEKAA 750
++ N+ +K Q + V P LA+ +
Sbjct: 131 KIQEGQNQMMMKIMQRSAVHDVPIETGELAKNVS 164
>AF039051-2|AAB94262.1| 413|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 155 protein.
Length = 413
Score = 31.1 bits (67), Expect = 3.3
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Query: 425 IEALKSTLMQMNEQGLSPNIETLSACLRSISVWGGGIQLQNLAMQLVAEFRELGIQPGLS 484
I +KSTL Q L NI +A L++ VW G +A++++AE + +GI L
Sbjct: 310 INQVKSTLGSSLFQ-LKLNIYEFAA-LKAFCVWKLGYHDSTIAIKIMAEDQYIGISSALR 367
Query: 485 AYY 487
YY
Sbjct: 368 KYY 370
>U41510-8|AAK39385.1| 493|Caenorhabditis elegans Hypothetical
protein ZC449.5 protein.
Length = 493
Score = 30.7 bits (66), Expect = 4.4
Identities = 32/137 (23%), Positives = 56/137 (40%), Gaps = 7/137 (5%)
Query: 655 QEEDVKEKIRSAAESILKHGETLEQRDESRDQRSPVSQKLSATALSNIIELLSDVSDKSS 714
+E+D +K +S++ S K E +S + S S+K + D +
Sbjct: 321 EEDDDDKKSKSSSSSDSKTDEKSTSESDSSSEAS--SEKTVEGTKKTLFSGPPDSDEDDD 378
Query: 715 ERWTSVETALNKLKQEQATGVPSKPESISTLAEKAASMGKLEIAATAVAYLAECGFEEAA 774
+ + A ++QAT P++ +T+A K+ M K E + L GF +
Sbjct: 379 DEGAGADEAF--FSEKQATEAPAELSRTTTMAVKSKKMKKSESGFNFIP-LVIAGFVFSG 435
Query: 775 GASARVLGAMLNRPEEE 791
A V M N+ +EE
Sbjct: 436 LVGAGVY--MFNKKKEE 450
>AC025716-14|AAK39603.1| 227|Caenorhabditis elegans Hypothetical
protein Y39G10AR.16 protein.
Length = 227
Score = 30.7 bits (66), Expect = 4.4
Identities = 25/104 (24%), Positives = 45/104 (43%)
Query: 654 YQEEDVKEKIRSAAESILKHGETLEQRDESRDQRSPVSQKLSATALSNIIELLSDVSDKS 713
++E K +SA K + ++++ R Q S +K+ + + + S V KS
Sbjct: 36 HRENSRGGKGKSARSKRSKRSKRDKKQNSKRQQNSKRQKKIKSNSAAPAPPAKSGVPAKS 95
Query: 714 SERWTSVETALNKLKQEQATGVPSKPESISTLAEKAASMGKLEI 757
+E+ +LK+EQ + K S + K AS K E+
Sbjct: 96 AEKAKEGSQRSARLKKEQKSEKKKKEGSQRSARSKKASSEKPEV 139
>Z75951-1|CAB00091.2| 408|Caenorhabditis elegans Hypothetical
protein F14A5.1 protein.
Length = 408
Score = 29.9 bits (64), Expect = 7.6
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Query: 425 IEALKSTLMQMNEQGLSPNIETLSACLRSISVWGGGIQLQNLAMQLVAEFRELGIQPGLS 484
I+ +K TL Q L N+ +A L+S +W G ++AM+++A +G+ L
Sbjct: 305 IQQVKLTLGSSFSQ-LKLNLYEFAA-LKSYCIWNMGFFETSIAMKIIAREHYIGVTAALR 362
Query: 485 AYY 487
YY
Sbjct: 363 NYY 365
>U64854-6|AAB18318.2| 5079|Caenorhabditis elegans Uncoordinated
protein 68 protein.
Length = 5079
Score = 29.9 bits (64), Expect = 7.6
Identities = 13/64 (20%), Positives = 32/64 (50%)
Query: 653 EYQEEDVKEKIRSAAESILKHGETLEQRDESRDQRSPVSQKLSATALSNIIELLSDVSDK 712
++++ KE+ ++++ + E D + R+ ++ LS T++SN D+S
Sbjct: 2896 DFEKSFYKERCSECLKALMAWNYSFEMMDRDANDRASAARTLSGTSISNFAPKPIDLSSM 2955
Query: 713 SSER 716
+ E+
Sbjct: 2956 TLEK 2959
>D45899-1|BAA08309.1| 5071|Caenorhabditis elegans ryanodine receptor
protein.
Length = 5071
Score = 29.9 bits (64), Expect = 7.6
Identities = 13/64 (20%), Positives = 32/64 (50%)
Query: 653 EYQEEDVKEKIRSAAESILKHGETLEQRDESRDQRSPVSQKLSATALSNIIELLSDVSDK 712
++++ KE+ ++++ + E D + R+ ++ LS T++SN D+S
Sbjct: 2901 DFEKSFYKERCSECLKALMAWNYSFEMMDRDANDRASAARTLSGTSISNFAPKPIDLSSM 2960
Query: 713 SSER 716
+ E+
Sbjct: 2961 TLEK 2964
>AL032632-14|CAA21593.1| 344|Caenorhabditis elegans Hypothetical
protein H22D14.1 protein.
Length = 344
Score = 29.9 bits (64), Expect = 7.6
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Query: 425 IEALKSTLMQMNEQGLSPNIETLSACLRSISVWGGGIQLQNLAMQLVAEFRELGIQPGLS 484
I+ +K TL Q L N+ +A L+S +W G ++AM+++A +G+ L
Sbjct: 255 IQQVKLTLGSSFSQ-LKLNLYEFAA-LKSYCIWNMGFFETSIAMKIIAREHYIGVTAALR 312
Query: 485 AYY 487
YY
Sbjct: 313 NYY 315
>AL022273-1|CAA18356.1| 344|Caenorhabditis elegans Hypothetical
protein H22D14.1 protein.
Length = 344
Score = 29.9 bits (64), Expect = 7.6
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Query: 425 IEALKSTLMQMNEQGLSPNIETLSACLRSISVWGGGIQLQNLAMQLVAEFRELGIQPGLS 484
I+ +K TL Q L N+ +A L+S +W G ++AM+++A +G+ L
Sbjct: 255 IQQVKLTLGSSFSQ-LKLNLYEFAA-LKSYCIWNMGFFETSIAMKIIAREHYIGVTAALR 312
Query: 485 AYY 487
YY
Sbjct: 313 NYY 315
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.317 0.132 0.382
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,902,189
Number of Sequences: 27539
Number of extensions: 771990
Number of successful extensions: 2396
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 2358
Number of HSP's gapped (non-prelim): 85
length of query: 820
length of database: 12,573,161
effective HSP length: 87
effective length of query: 733
effective length of database: 10,177,268
effective search space: 7459937444
effective search space used: 7459937444
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 64 (29.9 bits)
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