GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001008-TA|BGIBMGA001008-PA|IPR007114|Major facilitator
superfamily, IPR011701|Major facilitator superfamily MFS_1
         (540 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic acetylch...    29   0.24 
AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic acetylch...    29   0.24 
AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic acetylch...    27   1.3  
U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette...    26   2.2  
U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette...    26   2.2  
U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette...    26   2.2  

>AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 29.5 bits (63), Expect = 0.24
 Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 1/54 (1%)

Query: 171 WRYAVLILSAICLHSLLAACLLRPAKWYLKDPPLSEELVPLNKETDVELVNGSI 224
           W+Y  ++L  + L     A L   A   L+ P L ++ +P++K  D EL   ++
Sbjct: 497 WKYVAMVLDRLFLWIFTLAVLAGTAGIILQAPTLYDDRIPIDKTFD-ELATSTV 549


>AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 29.5 bits (63), Expect = 0.24
 Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 1/54 (1%)

Query: 171 WRYAVLILSAICLHSLLAACLLRPAKWYLKDPPLSEELVPLNKETDVELVNGSI 224
           W+Y  ++L  + L     A L   A   L+ P L ++ +P++K  D EL   ++
Sbjct: 497 WKYVAMVLDRLFLWIFTLAVLAGTAGIILQAPTLYDDRIPIDKTFD-ELATSTV 549


>AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 1 protein.
          Length = 557

 Score = 27.1 bits (57), Expect = 1.3
 Identities = 12/42 (28%), Positives = 20/42 (47%)

Query: 171 WRYAVLILSAICLHSLLAACLLRPAKWYLKDPPLSEELVPLN 212
           W+Y  L+L  + L     AC+L      L+ P L +   P++
Sbjct: 495 WKYVALVLDRLFLWIFTIACVLGTCLIILQAPSLYDNTQPID 536


>U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 26.2 bits (55), Expect = 2.2
 Identities = 23/98 (23%), Positives = 42/98 (42%), Gaps = 5/98 (5%)

Query: 89  GAILISAGLILTSLASSFWVFILSYSILNSMGVASVMAAFTLAINSFFKEKRSRAIGVGM 148
           G +L   G++  ++  S ++F+ + +  N   V +V   F+  +  F +EKRSR   V  
Sbjct: 460 GQVLDQDGVM--NINGSLFLFLTNMTFQNVFAVINV---FSAELPVFLREKRSRLYRVDT 514

Query: 149 SVTGLGAIYMPLLMSTLIYAYGWRYAVLILSAICLHSL 186
              G     +PL ++         Y ++ L     H L
Sbjct: 515 YFLGKTIAELPLFIAVPFVFTSITYPMIGLRTGATHYL 552


>U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 26.2 bits (55), Expect = 2.2
 Identities = 23/98 (23%), Positives = 42/98 (42%), Gaps = 5/98 (5%)

Query: 89  GAILISAGLILTSLASSFWVFILSYSILNSMGVASVMAAFTLAINSFFKEKRSRAIGVGM 148
           G +L   G++  ++  S ++F+ + +  N   V +V   F+  +  F +EKRSR   V  
Sbjct: 460 GQVLDQDGVM--NINGSLFLFLTNMTFQNVFAVINV---FSAELPVFLREKRSRLYRVDT 514

Query: 149 SVTGLGAIYMPLLMSTLIYAYGWRYAVLILSAICLHSL 186
              G     +PL ++         Y ++ L     H L
Sbjct: 515 YFLGKTIAELPLFIAVPFVFTSITYPMIGLRTGATHYL 552


>U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 673

 Score = 26.2 bits (55), Expect = 2.2
 Identities = 23/98 (23%), Positives = 42/98 (42%), Gaps = 5/98 (5%)

Query: 89  GAILISAGLILTSLASSFWVFILSYSILNSMGVASVMAAFTLAINSFFKEKRSRAIGVGM 148
           G +L   G++  ++  S ++F+ + +  N   V +V   F+  +  F +EKRSR   V  
Sbjct: 438 GQVLDQDGVM--NINGSLFLFLTNMTFQNVFAVINV---FSAELPVFLREKRSRLYRVDT 492

Query: 149 SVTGLGAIYMPLLMSTLIYAYGWRYAVLILSAICLHSL 186
              G     +PL ++         Y ++ L     H L
Sbjct: 493 YFLGKTIAELPLFIAVPFVFTSITYPMIGLRTGATHYL 530


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.324    0.139    0.417 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 451,207
Number of Sequences: 2123
Number of extensions: 15405
Number of successful extensions: 49
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 46
Number of HSP's gapped (non-prelim): 6
length of query: 540
length of database: 516,269
effective HSP length: 67
effective length of query: 473
effective length of database: 374,028
effective search space: 176915244
effective search space used: 176915244
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 50 (24.2 bits)