GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001007-TA|BGIBMGA001007-PA|IPR007114|Major facilitator
superfamily, IPR011701|Major facilitator superfamily MFS_1
         (740 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide...    25   7.2  
AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein pr...    25   9.5  

>DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide F
           receptor protein.
          Length = 575

 Score = 25.0 bits (52), Expect = 7.2
 Identities = 14/46 (30%), Positives = 22/46 (47%)

Query: 75  NSCVGLANGPVFRTFTYRQVSMTGAILVVSALMLTVFANSFVTYII 120
           +S V   NG     F+ + V +   +L  S  +L VF N  V Y++
Sbjct: 75  SSTVAPPNGDNDIIFSNKLVQIVFCVLYSSIFVLGVFGNVLVCYVV 120


>AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein
           protein.
          Length = 476

 Score = 24.6 bits (51), Expect = 9.5
 Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 2/42 (4%)

Query: 314 LENRSRKSSTLYLNESKKNSSANLGALAQERDPLKPKRKTSI 355
           +E+ +  +ST   + S+KN   N  +   +R+ LKPK K  +
Sbjct: 219 MESNNTPTSTTMRDYSRKNE--NCSSSGGQRESLKPKPKGKV 258


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.319    0.134    0.395 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 652,336
Number of Sequences: 2123
Number of extensions: 23353
Number of successful extensions: 51
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 50
Number of HSP's gapped (non-prelim): 2
length of query: 740
length of database: 516,269
effective HSP length: 69
effective length of query: 671
effective length of database: 369,782
effective search space: 248123722
effective search space used: 248123722
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 51 (24.6 bits)