GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001006-TA|BGIBMGA001006-PA|undefined
         (86 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023818-1|AAZ86739.1|  909|Drosophila melanogaster SD18573p pro...    29   0.61 
AM262815-1|CAK18655.1| 1518|Drosophila melanogaster PP1 interact...    29   0.61 
AE014297-3239|AAO41591.1| 1744|Drosophila melanogaster CG7029-PA...    29   0.61 
AY128427-1|AAM75020.1|  558|Drosophila melanogaster GH23001p pro...    29   0.80 
BT015281-1|AAT94510.1| 1489|Drosophila melanogaster LD08594p pro...    28   1.9  
BT011124-1|AAR82791.1| 1489|Drosophila melanogaster LD09942p pro...    28   1.9  
AE014297-286|AAF52001.1| 2296|Drosophila melanogaster CG2926-PA ...    28   1.9  
AE014298-877|AAF46154.1| 1543|Drosophila melanogaster CG15894-PA...    27   4.3  
BT003615-1|AAO39618.1|  658|Drosophila melanogaster GH12452p pro...    26   5.6  
AY058439-1|AAL13668.1|  565|Drosophila melanogaster GH21874p pro...    26   5.6  
AE014297-2030|AAF55186.1|  565|Drosophila melanogaster CG6156-PB...    26   5.6  
AE014297-2029|AAF55185.1|  630|Drosophila melanogaster CG6156-PA...    26   5.6  
AE014297-1125|AAF54511.2| 3111|Drosophila melanogaster CG3996-PA...    26   5.6  
U92536-1|AAD41441.1| 1487|Drosophila melanogaster RECQ helicase ...    25   9.9  
M81887-1|AAA28844.1| 2248|Drosophila melanogaster rutabaga adeny...    25   9.9  
AF145634-1|AAD38609.1|  696|Drosophila melanogaster BcDNA.GH0619...    25   9.9  
AE013599-1752|AAF58349.1|  717|Drosophila melanogaster CG6191-PA...    25   9.9  

>BT023818-1|AAZ86739.1|  909|Drosophila melanogaster SD18573p
           protein.
          Length = 909

 Score = 29.5 bits (63), Expect = 0.61
 Identities = 14/39 (35%), Positives = 20/39 (51%)

Query: 19  TQTSPSYAAERNPSNLPVRERNFSPDRSSVTLGPRPKAR 57
           T T+P+ A  R P+N        +P R +V   PRP +R
Sbjct: 869 TSTTPTSARARTPTNRVAVTAPNTPKRQAVAQSPRPTSR 907


>AM262815-1|CAK18655.1| 1518|Drosophila melanogaster PP1 interacting
            16 protein.
          Length = 1518

 Score = 29.5 bits (63), Expect = 0.61
 Identities = 14/39 (35%), Positives = 20/39 (51%)

Query: 19   TQTSPSYAAERNPSNLPVRERNFSPDRSSVTLGPRPKAR 57
            T T+P+ A  R P+N        +P R +V   PRP +R
Sbjct: 1478 TSTTPTSARARTPTNRVAVTAPNTPKRQAVAQSPRPTSR 1516


>AE014297-3239|AAO41591.1| 1744|Drosophila melanogaster CG7029-PA
            protein.
          Length = 1744

 Score = 29.5 bits (63), Expect = 0.61
 Identities = 14/39 (35%), Positives = 20/39 (51%)

Query: 19   TQTSPSYAAERNPSNLPVRERNFSPDRSSVTLGPRPKAR 57
            T T+P+ A  R P+N        +P R +V   PRP +R
Sbjct: 1704 TSTTPTSARARTPTNRVAVTAPNTPKRQAVAQSPRPTSR 1742


>AY128427-1|AAM75020.1|  558|Drosophila melanogaster GH23001p
           protein.
          Length = 558

 Score = 29.1 bits (62), Expect = 0.80
 Identities = 14/39 (35%), Positives = 20/39 (51%)

Query: 19  TQTSPSYAAERNPSNLPVRERNFSPDRSSVTLGPRPKAR 57
           T T+P+ A  R P+N        +P R +V   PRP +R
Sbjct: 518 TSTTPTSARARTPTNPVAVTAPNTPKRQAVAQSPRPTSR 556


>BT015281-1|AAT94510.1| 1489|Drosophila melanogaster LD08594p protein.
          Length = 1489

 Score = 27.9 bits (59), Expect = 1.9
 Identities = 16/55 (29%), Positives = 23/55 (41%)

Query: 7    DACLLPRKSSGRTQTSPSYAAERNPSNLPVRERNFSPDRSSVTLGPRPKARAGRP 61
            DA    R  SGR  +     +    S + +R R+ SP R S ++ P P      P
Sbjct: 1342 DAMRSHRSRSGRRNSRSFSRSVSRDSRVSLRSRSGSPKRRSFSMSPTPPPGTSPP 1396


>BT011124-1|AAR82791.1| 1489|Drosophila melanogaster LD09942p protein.
          Length = 1489

 Score = 27.9 bits (59), Expect = 1.9
 Identities = 16/55 (29%), Positives = 23/55 (41%)

Query: 7    DACLLPRKSSGRTQTSPSYAAERNPSNLPVRERNFSPDRSSVTLGPRPKARAGRP 61
            DA    R  SGR  +     +    S + +R R+ SP R S ++ P P      P
Sbjct: 1342 DAMRSHRSRSGRRNSRSFSRSVSRDSRVSLRSRSGSPKRRSFSMSPTPPPGTSPP 1396


>AE014297-286|AAF52001.1| 2296|Drosophila melanogaster CG2926-PA
            protein.
          Length = 2296

 Score = 27.9 bits (59), Expect = 1.9
 Identities = 16/55 (29%), Positives = 23/55 (41%)

Query: 7    DACLLPRKSSGRTQTSPSYAAERNPSNLPVRERNFSPDRSSVTLGPRPKARAGRP 61
            DA    R  SGR  +     +    S + +R R+ SP R S ++ P P      P
Sbjct: 1342 DAMRSHRSRSGRRNSRSFSRSVSRDSRVSLRSRSGSPKRRSFSMSPTPPPGTSPP 1396


>AE014298-877|AAF46154.1| 1543|Drosophila melanogaster CG15894-PA
           protein.
          Length = 1543

 Score = 26.6 bits (56), Expect = 4.3
 Identities = 16/54 (29%), Positives = 26/54 (48%)

Query: 3   VLSGDACLLPRKSSGRTQTSPSYAAERNPSNLPVRERNFSPDRSSVTLGPRPKA 56
           VL+    +LP   +G T T+ S +  R  S L   ERN    +   T+G + ++
Sbjct: 357 VLAEGIKVLPPAPTGSTATTSSRSRSRQTSTLANGERNEKEPKVKQTIGAQRRS 410


>BT003615-1|AAO39618.1|  658|Drosophila melanogaster GH12452p
           protein.
          Length = 658

 Score = 26.2 bits (55), Expect = 5.6
 Identities = 14/59 (23%), Positives = 25/59 (42%)

Query: 4   LSGDACLLPRKSSGRTQTSPSYAAERNPSNLPVRERNFSPDRSSVTLGPRPKARAGRPF 62
           L G+  +   +S    +    +   R  S   V E +  P + ++ LGP    + GRP+
Sbjct: 381 LLGEKSVAAEESRRSVEAVARHLLARLDSEKNVCENSLGPWQHNINLGPEDAPKTGRPW 439


>AY058439-1|AAL13668.1|  565|Drosophila melanogaster GH21874p
           protein.
          Length = 565

 Score = 26.2 bits (55), Expect = 5.6
 Identities = 14/59 (23%), Positives = 25/59 (42%)

Query: 4   LSGDACLLPRKSSGRTQTSPSYAAERNPSNLPVRERNFSPDRSSVTLGPRPKARAGRPF 62
           L G+  +   +S    +    +   R  S   V E +  P + ++ LGP    + GRP+
Sbjct: 288 LLGEKSVAAEESRRSVEAVARHLLARLDSEKNVCENSLGPWQHNINLGPEDAPKTGRPW 346


>AE014297-2030|AAF55186.1|  565|Drosophila melanogaster CG6156-PB,
           isoform B protein.
          Length = 565

 Score = 26.2 bits (55), Expect = 5.6
 Identities = 14/59 (23%), Positives = 25/59 (42%)

Query: 4   LSGDACLLPRKSSGRTQTSPSYAAERNPSNLPVRERNFSPDRSSVTLGPRPKARAGRPF 62
           L G+  +   +S    +    +   R  S   V E +  P + ++ LGP    + GRP+
Sbjct: 288 LLGEKSVAAEESRRSVEAVARHLLARLDSEKNVCENSLGPWQHNINLGPEDAPKTGRPW 346


>AE014297-2029|AAF55185.1|  630|Drosophila melanogaster CG6156-PA,
           isoform A protein.
          Length = 630

 Score = 26.2 bits (55), Expect = 5.6
 Identities = 14/59 (23%), Positives = 25/59 (42%)

Query: 4   LSGDACLLPRKSSGRTQTSPSYAAERNPSNLPVRERNFSPDRSSVTLGPRPKARAGRPF 62
           L G+  +   +S    +    +   R  S   V E +  P + ++ LGP    + GRP+
Sbjct: 353 LLGEKSVAAEESRRSVEAVARHLLARLDSEKNVCENSLGPWQHNINLGPEDAPKTGRPW 411


>AE014297-1125|AAF54511.2| 3111|Drosophila melanogaster CG3996-PA
            protein.
          Length = 3111

 Score = 26.2 bits (55), Expect = 5.6
 Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 2/44 (4%)

Query: 13   RKSSGRTQTSPSYAAERNPS--NLPVRERNFSPDRSSVTLGPRP 54
            RKS+    TSPS   +R+PS    P R+   SP  S     P P
Sbjct: 2277 RKSAKSPYTSPSRNRQRSPSPTRSPERKSKKSPYTSPARRKPHP 2320


>U92536-1|AAD41441.1| 1487|Drosophila melanogaster RECQ helicase
           homolog protein.
          Length = 1487

 Score = 25.4 bits (53), Expect = 9.9
 Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 2/45 (4%)

Query: 12  PRKSSGRTQTSPSYAAERNPSNLPVRERNFSPDRSSVTLGPRPKA 56
           P KS    Q +   +A+ N   +P +    S +R+SVT  P P A
Sbjct: 289 PEKSGSGEQGNKLGSAKEN--EIPTKPATASLERNSVTSSPSPAA 331


>M81887-1|AAA28844.1| 2248|Drosophila melanogaster rutabaga adenylyl
            cyclase protein.
          Length = 2248

 Score = 25.4 bits (53), Expect = 9.9
 Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 5/54 (9%)

Query: 3    VLSGDACLLPRKSSGRTQTSPSYAAERNP-----SNLPVRERNFSPDRSSVTLG 51
            VL GD  ++PR+   RT   P      +P     SNL + +    P  +S+  G
Sbjct: 1404 VLGGDCFMMPRRDRERTYVPPLNQHGHHPPHHLHSNLNLNQSQHPPSFTSLGYG 1457


>AF145634-1|AAD38609.1|  696|Drosophila melanogaster BcDNA.GH06193
           protein.
          Length = 696

 Score = 25.4 bits (53), Expect = 9.9
 Identities = 12/24 (50%), Positives = 14/24 (58%)

Query: 34  LPVRERNFSPDRSSVTLGPRPKAR 57
           LP+RER FS   S   L P  +AR
Sbjct: 277 LPLRERTFSNGASDQNLQPERRAR 300


>AE013599-1752|AAF58349.1|  717|Drosophila melanogaster CG6191-PA
           protein.
          Length = 717

 Score = 25.4 bits (53), Expect = 9.9
 Identities = 12/24 (50%), Positives = 14/24 (58%)

Query: 34  LPVRERNFSPDRSSVTLGPRPKAR 57
           LP+RER FS   S   L P  +AR
Sbjct: 277 LPLRERTFSNGASDQNLQPERRAR 300


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.319    0.132    0.416 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,640,892
Number of Sequences: 52641
Number of extensions: 127160
Number of successful extensions: 405
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 388
Number of HSP's gapped (non-prelim): 21
length of query: 86
length of database: 24,830,863
effective HSP length: 65
effective length of query: 21
effective length of database: 21,409,198
effective search space: 449593158
effective search space used: 449593158
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 53 (25.4 bits)