Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001006-TA|BGIBMGA001006-PA|undefined
(86 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL110485-10|CAB60358.2| 304|Caenorhabditis elegans Hypothetical... 27 1.2
Z93382-12|CAB07620.2| 1238|Caenorhabditis elegans Hypothetical p... 27 1.6
U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated p... 27 1.6
U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin pr... 27 1.6
D83665-1|BAA20550.1| 1238|Caenorhabditis elegans copper transpor... 27 1.6
AL032665-3|CAA21773.2| 1238|Caenorhabditis elegans Hypothetical ... 27 1.6
AC006627-3|AAK85461.1| 504|Caenorhabditis elegans Hypothetical ... 27 1.6
U58755-16|AAB00705.2| 512|Caenorhabditis elegans Hypothetical p... 26 3.8
U88178-4|AAC24411.1| 460|Caenorhabditis elegans Hypothetical pr... 25 5.0
U41533-10|AAA83172.1| 491|Caenorhabditis elegans Hypothetical p... 25 6.6
U41533-8|AAA83171.2| 588|Caenorhabditis elegans Hypothetical pr... 25 6.6
AF003136-10|AAK21378.2| 1281|Caenorhabditis elegans High inciden... 25 6.6
AF000263-12|AAO21392.1| 838|Caenorhabditis elegans Hypothetical... 25 6.6
AF000263-11|AAL77184.1| 866|Caenorhabditis elegans Hypothetical... 25 6.6
AF000263-10|AAM22070.1| 163|Caenorhabditis elegans Hypothetical... 25 6.6
AF000263-9|AAO21391.2| 184|Caenorhabditis elegans Hypothetical ... 25 6.6
AF000263-8|AAK21461.1| 924|Caenorhabditis elegans Hypothetical ... 25 6.6
AF000263-7|AAK21463.1| 925|Caenorhabditis elegans Hypothetical ... 25 6.6
AC006672-7|AAM98004.1| 668|Caenorhabditis elegans Hypothetical ... 25 6.6
Z77666-12|CAJ43911.2| 896|Caenorhabditis elegans Hypothetical p... 25 8.7
>AL110485-10|CAB60358.2| 304|Caenorhabditis elegans Hypothetical
protein Y46G5A.15 protein.
Length = 304
Score = 27.5 bits (58), Expect = 1.2
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Query: 13 RKSSGRTQTSPSYAAERNPSNLPVRERNFSPDRSSVTLGPR---PKARAG 59
RKS R + SP+ + R+ P + F+P RSS + PR P+ AG
Sbjct: 35 RKSRDRYRRSPNRNSNRHHPYHPSSQPAFAPFRSSQSYRPRENEPEEEAG 84
>Z93382-12|CAB07620.2| 1238|Caenorhabditis elegans Hypothetical
protein Y76A2A.2 protein.
Length = 1238
Score = 27.1 bits (57), Expect = 1.6
Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 4/60 (6%)
Query: 4 LSGDACLLPRKSSGRTQTSPSYAAERNPSNLPVRE-RNFSPDRSSVTLG-PRPKARAGRP 61
LSG C +PR G+T T P E N + +E +PD +++ +G R R G P
Sbjct: 877 LSGSTCEIPRLPDGQTITIP--GTEVNLLQVSSKEVSQPNPDTANIVIGTERMMERHGIP 934
>U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated
protein 44, isoform f protein.
Length = 6994
Score = 27.1 bits (57), Expect = 1.6
Identities = 13/49 (26%), Positives = 20/49 (40%)
Query: 10 LLPRKSSGRTQTSPSYAAERNPSNLPVRERNFSPDRSSVTLGPRPKARA 58
+ P SS + P E + RE P++ +VT P P + A
Sbjct: 2594 IFPIPSSEQQSEEPHIVKETTTTTTVTRELYDEPEKGNVTFSPAPSSHA 2642
>U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin
protein.
Length = 6994
Score = 27.1 bits (57), Expect = 1.6
Identities = 13/49 (26%), Positives = 20/49 (40%)
Query: 10 LLPRKSSGRTQTSPSYAAERNPSNLPVRERNFSPDRSSVTLGPRPKARA 58
+ P SS + P E + RE P++ +VT P P + A
Sbjct: 2594 IFPIPSSEQQSEEPHIVKETTTTTTVTRELYDEPEKGNVTFSPAPSSHA 2642
>D83665-1|BAA20550.1| 1238|Caenorhabditis elegans copper
transporting ATPase protein.
Length = 1238
Score = 27.1 bits (57), Expect = 1.6
Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 4/60 (6%)
Query: 4 LSGDACLLPRKSSGRTQTSPSYAAERNPSNLPVRE-RNFSPDRSSVTLG-PRPKARAGRP 61
LSG C +PR G+T T P E N + +E +PD +++ +G R R G P
Sbjct: 877 LSGSTCEIPRLPDGQTITIP--GTEVNLLQVSSKEVSQPNPDTANIVIGTERMMERHGIP 934
>AL032665-3|CAA21773.2| 1238|Caenorhabditis elegans Hypothetical
protein Y76A2A.2 protein.
Length = 1238
Score = 27.1 bits (57), Expect = 1.6
Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 4/60 (6%)
Query: 4 LSGDACLLPRKSSGRTQTSPSYAAERNPSNLPVRE-RNFSPDRSSVTLG-PRPKARAGRP 61
LSG C +PR G+T T P E N + +E +PD +++ +G R R G P
Sbjct: 877 LSGSTCEIPRLPDGQTITIP--GTEVNLLQVSSKEVSQPNPDTANIVIGTERMMERHGIP 934
>AC006627-3|AAK85461.1| 504|Caenorhabditis elegans Hypothetical
protein E01A2.4 protein.
Length = 504
Score = 27.1 bits (57), Expect = 1.6
Identities = 18/45 (40%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Query: 13 RKSSGRTQTSPSYAAERNPSNLPVRERNFSPDRSSVTLGPRPKAR 57
R RT+ SPS R S PVR R+ SP R V+ P R
Sbjct: 105 RSPPRRTRRSPSPPRRRRISRSPVR-RSRSPPRRQVSRSRSPPPR 148
>U58755-16|AAB00705.2| 512|Caenorhabditis elegans Hypothetical
protein C34D4.1 protein.
Length = 512
Score = 25.8 bits (54), Expect = 3.8
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 11 LPRKSSGRTQTSPSYAAERNPSNLPVR 37
+ RKS T +S S AE+N N P+R
Sbjct: 24 ISRKSETTTTSSGSSGAEKNALNSPIR 50
>U88178-4|AAC24411.1| 460|Caenorhabditis elegans Hypothetical
protein W09C3.2 protein.
Length = 460
Score = 25.4 bits (53), Expect = 5.0
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 14 KSSGRTQTSPSYAAERNPSNLPVRERNFSPDRSSVTLGPRPK 55
K+S + SPS ++ R +N +SS T+ PK
Sbjct: 413 KTSSKPNPSPSKKTQKAKEKAKKRSKNLGAKKSSSTVKAEPK 454
>U41533-10|AAA83172.1| 491|Caenorhabditis elegans Hypothetical
protein R05F9.1a protein.
Length = 491
Score = 25.0 bits (52), Expect = 6.6
Identities = 16/35 (45%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Query: 15 SSGRTQTSPSYAAERNPSNLPVRERNFSPDRSSVT 49
SSG T SPS + RN E N PDRS T
Sbjct: 51 SSGHTSPSPSESPARNAGCSSSGESN--PDRSLTT 83
>U41533-8|AAA83171.2| 588|Caenorhabditis elegans Hypothetical
protein R05F9.1b protein.
Length = 588
Score = 25.0 bits (52), Expect = 6.6
Identities = 16/35 (45%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Query: 15 SSGRTQTSPSYAAERNPSNLPVRERNFSPDRSSVT 49
SSG T SPS + RN E N PDRS T
Sbjct: 148 SSGHTSPSPSESPARNAGCSSSGESN--PDRSLTT 180
>AF003136-10|AAK21378.2| 1281|Caenorhabditis elegans High incidence
of males (increasedx chromosome loss) protein 1, isoform
a protein.
Length = 1281
Score = 25.0 bits (52), Expect = 6.6
Identities = 10/25 (40%), Positives = 16/25 (64%)
Query: 17 GRTQTSPSYAAERNPSNLPVRERNF 41
G+T TS +Y+ E N+ ++ RNF
Sbjct: 121 GQTVTSAAYSQEMESINIFIKARNF 145
>AF000263-12|AAO21392.1| 838|Caenorhabditis elegans Hypothetical
protein T08B2.5f protein.
Length = 838
Score = 25.0 bits (52), Expect = 6.6
Identities = 12/36 (33%), Positives = 17/36 (47%)
Query: 11 LPRKSSGRTQTSPSYAAERNPSNLPVRERNFSPDRS 46
+PR ++ SPS+A E S R+R RS
Sbjct: 12 IPRSGENKSSRSPSWAREARRSRSRSRDRRGGRSRS 47
>AF000263-11|AAL77184.1| 866|Caenorhabditis elegans Hypothetical
protein T08B2.5c protein.
Length = 866
Score = 25.0 bits (52), Expect = 6.6
Identities = 12/36 (33%), Positives = 17/36 (47%)
Query: 11 LPRKSSGRTQTSPSYAAERNPSNLPVRERNFSPDRS 46
+PR ++ SPS+A E S R+R RS
Sbjct: 40 IPRSGENKSSRSPSWAREARRSRSRSRDRRGGRSRS 75
>AF000263-10|AAM22070.1| 163|Caenorhabditis elegans Hypothetical
protein T08B2.5d protein.
Length = 163
Score = 25.0 bits (52), Expect = 6.6
Identities = 12/36 (33%), Positives = 17/36 (47%)
Query: 11 LPRKSSGRTQTSPSYAAERNPSNLPVRERNFSPDRS 46
+PR ++ SPS+A E S R+R RS
Sbjct: 98 IPRSGENKSSRSPSWAREARRSRSRSRDRRGGRSRS 133
>AF000263-9|AAO21391.2| 184|Caenorhabditis elegans Hypothetical
protein T08B2.5e protein.
Length = 184
Score = 25.0 bits (52), Expect = 6.6
Identities = 12/36 (33%), Positives = 17/36 (47%)
Query: 11 LPRKSSGRTQTSPSYAAERNPSNLPVRERNFSPDRS 46
+PR ++ SPS+A E S R+R RS
Sbjct: 119 IPRSGENKSSRSPSWAREARRSRSRSRDRRGGRSRS 154
>AF000263-8|AAK21461.1| 924|Caenorhabditis elegans Hypothetical
protein T08B2.5a protein.
Length = 924
Score = 25.0 bits (52), Expect = 6.6
Identities = 12/36 (33%), Positives = 17/36 (47%)
Query: 11 LPRKSSGRTQTSPSYAAERNPSNLPVRERNFSPDRS 46
+PR ++ SPS+A E S R+R RS
Sbjct: 98 IPRSGENKSSRSPSWAREARRSRSRSRDRRGGRSRS 133
>AF000263-7|AAK21463.1| 925|Caenorhabditis elegans Hypothetical
protein T08B2.5b protein.
Length = 925
Score = 25.0 bits (52), Expect = 6.6
Identities = 12/36 (33%), Positives = 17/36 (47%)
Query: 11 LPRKSSGRTQTSPSYAAERNPSNLPVRERNFSPDRS 46
+PR ++ SPS+A E S R+R RS
Sbjct: 99 IPRSGENKSSRSPSWAREARRSRSRSRDRRGGRSRS 134
>AC006672-7|AAM98004.1| 668|Caenorhabditis elegans Hypothetical
protein K08D12.6 protein.
Length = 668
Score = 25.0 bits (52), Expect = 6.6
Identities = 13/49 (26%), Positives = 21/49 (42%)
Query: 13 RKSSGRTQTSPSYAAERNPSNLPVRERNFSPDRSSVTLGPRPKARAGRP 61
R S G Q +P+ AA P++ PV + + + P P + P
Sbjct: 289 RNSYGDEQVTPAPAAAPAPADAPVEQAPVAVPAPAPAAAPAPDCGSAAP 337
>Z77666-12|CAJ43911.2| 896|Caenorhabditis elegans Hypothetical
protein K08E7.5c protein.
Length = 896
Score = 24.6 bits (51), Expect = 8.7
Identities = 14/45 (31%), Positives = 21/45 (46%), Gaps = 4/45 (8%)
Query: 12 PRKSSGRTQTSPSYAAERNPSNLPVRERNFSPDRSSVTLGPRPKA 56
P+K++ + T+P+ P+ PV E SS T P P A
Sbjct: 109 PKKTTSKPATTPT----PEPTTTPVEEEKVKVSPSSSTKEPSPYA 149
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.319 0.132 0.416
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,768,313
Number of Sequences: 27539
Number of extensions: 59693
Number of successful extensions: 209
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 193
Number of HSP's gapped (non-prelim): 23
length of query: 86
length of database: 12,573,161
effective HSP length: 65
effective length of query: 21
effective length of database: 10,783,126
effective search space: 226445646
effective search space used: 226445646
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 51 (24.6 bits)
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