GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001002-TA|BGIBMGA001002-PA|IPR001092|Basic
helix-loop-helix dimerisation region bHLH, IPR011598|Helix-loop-helix
DNA-binding
         (404 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF395079-1|AAK97461.1|  371|Anopheles gambiae basic helix-loop-h...    66   1e-12
DQ974161-1|ABJ52801.1|  409|Anopheles gambiae serpin 2 protein.        27   0.69 
DQ974169-1|ABJ52809.1|  508|Anopheles gambiae serpin 11 protein.       27   1.2  
AJ420785-4|CAD12784.1|  395|Anopheles gambiae serpin protein.          25   3.7  
AJ420785-3|CAD12783.1|  380|Anopheles gambiae serpin protein.          25   3.7  
AJ420785-2|CAD12782.1|  382|Anopheles gambiae serpin protein.          25   3.7  
AJ420785-1|CAD12781.1|  379|Anopheles gambiae serpin protein.          25   3.7  
AJ271353-1|CAB69785.1|  380|Anopheles gambiae putative serine pr...    25   3.7  
AJ271352-1|CAB69784.1|  379|Anopheles gambiae putative serine pr...    25   3.7  
AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein p...    24   8.5  

>AF395079-1|AAK97461.1|  371|Anopheles gambiae basic
           helix-loop-helix transcriptionfactor ASH protein.
          Length = 371

 Score = 66.5 bits (155), Expect = 1e-12
 Identities = 39/81 (48%), Positives = 50/81 (61%), Gaps = 4/81 (4%)

Query: 115 DGFAALRRHIPEEVAAAFETTNSNRGPNKKLSKVETLRMAVEYIRNLESLLNIGHADKEN 174
           +GFA LR+HIP  V  A   TN  RG NKKLSKV+TLR+AVEYIR+L+ +L+      E 
Sbjct: 119 NGFANLRQHIPSTVVTAL--TNGARGANKKLSKVDTLRLAVEYIRSLQRMLD--ENGGEL 174

Query: 175 TSRSCMESFPSPASSSPRENS 195
            S    +   S +SS+   NS
Sbjct: 175 PSNKQQQQLTSASSSNQLSNS 195


>DQ974161-1|ABJ52801.1|  409|Anopheles gambiae serpin 2 protein.
          Length = 409

 Score = 27.5 bits (58), Expect = 0.69
 Identities = 13/42 (30%), Positives = 24/42 (57%), Gaps = 5/42 (11%)

Query: 293 YLSETEVPVSESDFEIKYADSLNQHIQQ-----SFNENTDIP 329
           Y+ E EV V+   F+  +++ LN+ +QQ      F++N  +P
Sbjct: 287 YMEENEVNVTLPKFKFDFSEQLNEPLQQVGIREIFSQNASLP 328


>DQ974169-1|ABJ52809.1|  508|Anopheles gambiae serpin 11 protein.
          Length = 508

 Score = 26.6 bits (56), Expect = 1.2
 Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 7/62 (11%)

Query: 246 LYDEEEGQPLTPSSDLLVQDEVNSHILDAHFQFPNSAEHFSVIPE-QNYLSETEVPVSES 304
           L+D E    LTP +D   Q+ +  + LD+  Q   S   F ++P  ++ L    VP+SE 
Sbjct: 187 LHDIERA--LTPQAD---QEPITKNKLDSASQIFKSTT-FELLPAFRDSLKSNHVPLSEM 240

Query: 305 DF 306
           DF
Sbjct: 241 DF 242


>AJ420785-4|CAD12784.1|  395|Anopheles gambiae serpin protein.
          Length = 395

 Score = 25.0 bits (52), Expect = 3.7
 Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 1/69 (1%)

Query: 294 LSETEVPVSESDFEIKYADSLNQHIQQSFNENTDIPFALNPDLILPENQFKFKESDNSSF 353
           + + EV V    F+I++   LN+ +Q    E      A  PDL+      K  +  + +F
Sbjct: 265 MHKQEVEVFLPKFKIEFTRDLNEDLQALGMERMFSDSAEFPDLLEQNEPMKVSKVVHKAF 324

Query: 354 TE-NEDFCE 361
            E NE+  E
Sbjct: 325 IEVNEEGTE 333


>AJ420785-3|CAD12783.1|  380|Anopheles gambiae serpin protein.
          Length = 380

 Score = 25.0 bits (52), Expect = 3.7
 Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 1/69 (1%)

Query: 294 LSETEVPVSESDFEIKYADSLNQHIQQSFNENTDIPFALNPDLILPENQFKFKESDNSSF 353
           + + EV V    F+I++   LN+ +Q    E      A  PDL+      K  +  + +F
Sbjct: 265 MHKQEVEVFLPKFKIEFTRDLNEDLQALGMERMFSDSAEFPDLLEQNEPMKVSKVVHKAF 324

Query: 354 TE-NEDFCE 361
            E NE+  E
Sbjct: 325 IEVNEEGTE 333


>AJ420785-2|CAD12782.1|  382|Anopheles gambiae serpin protein.
          Length = 382

 Score = 25.0 bits (52), Expect = 3.7
 Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 1/69 (1%)

Query: 294 LSETEVPVSESDFEIKYADSLNQHIQQSFNENTDIPFALNPDLILPENQFKFKESDNSSF 353
           + + EV V    F+I++   LN+ +Q    E      A  PDL+      K  +  + +F
Sbjct: 265 MHKQEVEVFLPKFKIEFTRDLNEDLQALGMERMFSDSAEFPDLLEQNEPMKVSKVVHKAF 324

Query: 354 TE-NEDFCE 361
            E NE+  E
Sbjct: 325 IEVNEEGTE 333


>AJ420785-1|CAD12781.1|  379|Anopheles gambiae serpin protein.
          Length = 379

 Score = 25.0 bits (52), Expect = 3.7
 Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 1/69 (1%)

Query: 294 LSETEVPVSESDFEIKYADSLNQHIQQSFNENTDIPFALNPDLILPENQFKFKESDNSSF 353
           + + EV V    F+I++   LN+ +Q    E      A  PDL+      K  +  + +F
Sbjct: 265 MHKQEVEVFLPKFKIEFTRDLNEDLQALGMERMFSDSAEFPDLLEQNEPMKVSKVVHKAF 324

Query: 354 TE-NEDFCE 361
            E NE+  E
Sbjct: 325 IEVNEEGTE 333


>AJ271353-1|CAB69785.1|  380|Anopheles gambiae putative serine
           protease inhibitor protein.
          Length = 380

 Score = 25.0 bits (52), Expect = 3.7
 Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 1/69 (1%)

Query: 294 LSETEVPVSESDFEIKYADSLNQHIQQSFNENTDIPFALNPDLILPENQFKFKESDNSSF 353
           + + EV V    F+I++   LN+ +Q    E      A  PDL+      K  +  + +F
Sbjct: 265 MHKQEVEVFLPKFKIEFTRDLNEDLQALGMERMFSDSAEFPDLLEQNEPLKVSKVVHKAF 324

Query: 354 TE-NEDFCE 361
            E NE+  E
Sbjct: 325 IEVNEEGTE 333


>AJ271352-1|CAB69784.1|  379|Anopheles gambiae putative serine
           protease inhibitor protein.
          Length = 379

 Score = 25.0 bits (52), Expect = 3.7
 Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 1/69 (1%)

Query: 294 LSETEVPVSESDFEIKYADSLNQHIQQSFNENTDIPFALNPDLILPENQFKFKESDNSSF 353
           + + EV V    F+I++   LN+ +Q    E      A  PDL+      K  +  + +F
Sbjct: 265 MHKQEVEVFLPKFKIEFTRDLNEDLQALGMERMFSDSAEFPDLLEQNEPLKVSKVVHKAF 324

Query: 354 TE-NEDFCE 361
            E NE+  E
Sbjct: 325 IEVNEEGTE 333


>AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein
           protein.
          Length = 541

 Score = 23.8 bits (49), Expect = 8.5
 Identities = 10/19 (52%), Positives = 12/19 (63%)

Query: 115 DGFAALRRHIPEEVAAAFE 133
           DG    R H+P + AAAFE
Sbjct: 433 DGTQRARVHLPAKAAAAFE 451


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.311    0.127    0.351 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 382,013
Number of Sequences: 2123
Number of extensions: 15095
Number of successful extensions: 38
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 28
Number of HSP's gapped (non-prelim): 10
length of query: 404
length of database: 516,269
effective HSP length: 66
effective length of query: 338
effective length of database: 376,151
effective search space: 127139038
effective search space used: 127139038
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 49 (23.8 bits)