Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000999-TA|BGIBMGA000999-PA|IPR003599|Immunoglobulin
subtype, IPR003598|Immunoglobulin subtype 2, IPR000719|Protein kinase,
IPR007110|Immunoglobulin-like, IPR011009|Protein kinase-like,
IPR013151|Immunoglobulin, IPR013098|Immunoglobulin I-set,
IPR001245|Tyrosine protein kinase
(403 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC2F3.15 |lsk1||latrunculin sensitive kinase Lsk1 |Schizosacch... 30 0.51
SPCC320.13c |ark1|aim1, SPCC330.16|aurora-B kinase Ark1|Schizosa... 29 0.88
SPCC825.01 |||ribosome biogenesis ATPase, Arb family |Schizosacc... 29 1.5
SPBC1105.06 |pmc4|med4|RNA polymerase II holoenzyme component Pm... 28 2.0
SPCC1322.08 |srk1|mkp1|MAPK-activated protein kinase Srk1|Schizo... 28 2.7
SPBC13G1.05 |||DUF747 family protein|Schizosaccharomyces pombe|c... 27 6.2
SPCC790.02 |pep3|vps18, vps18|ubiquitin-protein ligase E3 |Schiz... 27 6.2
SPCC188.08c |ubp22|ubp5|ubiquitin C-terminal hydrolase Ubp22|Sch... 27 6.2
SPCC1020.02 |spc7||kinetochore protein Spc7|Schizosaccharomyces ... 27 6.2
SPCC4G3.08 |psk1||serine/threonine protein kinase Psk1|Schizosac... 26 8.2
>SPAC2F3.15 |lsk1||latrunculin sensitive kinase Lsk1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 593
Score = 30.3 bits (65), Expect = 0.51
Identities = 12/35 (34%), Positives = 20/35 (57%)
Query: 355 RQLDVFGRARHSNVVALIGLCSEMDPHYMLLEHTD 389
R++ + R RH N+V L+ + E YM+ E+ D
Sbjct: 323 REVKILQRLRHKNIVRLLEIMVEKSSVYMVFEYMD 357
>SPCC320.13c |ark1|aim1, SPCC330.16|aurora-B kinase
Ark1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 355
Score = 29.5 bits (63), Expect = 0.88
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 13/86 (15%)
Query: 301 LGRGEFGEVLLAKIDMSQVAKLRKSEGADAEPNPRPVLVKSLTTKDEVQLAEFRRQLDVF 360
LG+G+FG V LAK + K+ L KS + +++ + RR++++
Sbjct: 95 LGKGKFGRVYLAKEKKTGFIVALKT------------LHKSELVQSKIE-KQVRREIEIQ 141
Query: 361 GRARHSNVVALIGLCSEMDPHYMLLE 386
RH N++ L G + Y++LE
Sbjct: 142 SNLRHKNILRLYGHFHDEKRIYLILE 167
>SPCC825.01 |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 822
Score = 28.7 bits (61), Expect = 1.5
Identities = 23/85 (27%), Positives = 42/85 (49%), Gaps = 10/85 (11%)
Query: 4 NSSGK---IHCKVAGGVSPT---IQWYLNDADPLPDGVTSANGTLMVSEASKRHAGLYTC 57
N SGK +H +A G+ PT + +YL D + +P+ +T L ++E ++H
Sbjct: 310 NGSGKSTLLHA-IACGLIPTPSSLDFYLLDREYIPNELTCVEAVLDINEQERKHLEAMME 368
Query: 58 KAVDGDKKIESKITLDVVVSPRITE 82
+D K + + LD + R+T+
Sbjct: 369 DLLDDPDK--NAVELD-TIQTRLTD 390
>SPBC1105.06 |pmc4|med4|RNA polymerase II holoenzyme component Pmc4
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 239
Score = 28.3 bits (60), Expect = 2.0
Identities = 17/62 (27%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Query: 37 SANGTLMVSEAS-KRHAGLYTCKAVDGDKKIESKITLDVVVSPRITEPVQDQNVQVTAGQ 95
SA + + SE K + T +D +K +E K ++ SP T +++ V+ A +
Sbjct: 163 SATASQLFSEQPPKTNEPTETETEIDANKAVEEKTKMNYPASPTFTTQEENKEVESPANK 222
Query: 96 DV 97
DV
Sbjct: 223 DV 224
>SPCC1322.08 |srk1|mkp1|MAPK-activated protein kinase
Srk1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 580
Score = 27.9 bits (59), Expect = 2.7
Identities = 13/60 (21%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Query: 330 AEPNPRPVLVKSLTTKDEVQLAEFRRQLDVFGRARHSNVVALIGLCSEMDPHYMLLEHTD 389
A+PN P + + V+ +++ + R +H N++ L+ + +Y++LE D
Sbjct: 158 AQPNTDP---RDPRKRQGVESHNILKEVQIMRRVKHPNIIQLLEFIQTPEYYYLVLELAD 214
>SPBC13G1.05 |||DUF747 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 649
Score = 26.6 bits (56), Expect = 6.2
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 244 GETDAVKVNGGPAQNGRLLPHEKDSGPDNSEV 275
G+ D ++ + R LP+++D G DN V
Sbjct: 8 GQADPLESENESSLTSRFLPNKRDGGKDNESV 39
>SPCC790.02 |pep3|vps18, vps18|ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 900
Score = 26.6 bits (56), Expect = 6.2
Identities = 21/93 (22%), Positives = 43/93 (46%), Gaps = 6/93 (6%)
Query: 7 GKIHCKVAGGVSPTIQWYLNDADPLPDGVTSANGTLMVSEASKRHAGLYTCKAVDGDKKI 66
G++ K+ G +QW LN + L + S +G L+ + A L K + +K I
Sbjct: 127 GRVLTKLKGHTVEAVQWNLNGGNILELLIASKSGVLLELVLTLDSANL---KRI--EKSI 181
Query: 67 ESKITLDVVVSPR-ITEPVQDQNVQVTAGQDVV 98
+ + + SP I + +QD ++ + + ++
Sbjct: 182 NTLYSFPFMESPMGILKNIQDDSMTIVTNKRIL 214
>SPCC188.08c |ubp22|ubp5|ubiquitin C-terminal hydrolase
Ubp22|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1108
Score = 26.6 bits (56), Expect = 6.2
Identities = 13/26 (50%), Positives = 14/26 (53%)
Query: 24 YLNDADPLPDGVTSANGTLMVSEASK 49
YLND D D V NGTL + A K
Sbjct: 1067 YLNDEDITYDVVEKLNGTLALDRAKK 1092
>SPCC1020.02 |spc7||kinetochore protein Spc7|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1364
Score = 26.6 bits (56), Expect = 6.2
Identities = 13/46 (28%), Positives = 23/46 (50%)
Query: 242 EDGETDAVKVNGGPAQNGRLLPHEKDSGPDNSEVSRASKKSGNFER 287
E G ++K + P+ +L K S P + E+S SK + N ++
Sbjct: 280 EQGTVYSLKASHDPSNQTQLSSPNKSSSPTSIEISDFSKNNENHDQ 325
>SPCC4G3.08 |psk1||serine/threonine protein kinase
Psk1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 436
Score = 26.2 bits (55), Expect = 8.2
Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 279 SKKSGNFERLSLPRTLLTDPIT-LGRGEFGEVLLAK 313
S K N+ R P+T LGRG +G+VLL K
Sbjct: 74 SSKGDNYVPSGKMRPADFQPLTVLGRGSYGKVLLVK 109
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.314 0.131 0.378
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,592,670
Number of Sequences: 5004
Number of extensions: 58229
Number of successful extensions: 119
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 112
Number of HSP's gapped (non-prelim): 10
length of query: 403
length of database: 2,362,478
effective HSP length: 74
effective length of query: 329
effective length of database: 1,992,182
effective search space: 655427878
effective search space used: 655427878
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 55 (26.2 bits)
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