Silkworm BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000998-TA|BGIBMGA000998-PA|undefined
         (124 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK124693-1|BAC85927.1|  206|Homo sapiens protein ( Homo sapiens ...    35   0.085
AY358373-1|AAQ88739.1|  455|Homo sapiens LHPE306 protein.              31   1.4  
BC141808-1|AAI41809.1|  446|Homo sapiens LOC348174 protein protein.    30   1.8  
BC078143-1|AAH78143.1|  446|Homo sapiens secretory protein LOC34...    30   1.8  
BC039068-1|AAH39068.1|  301|Homo sapiens MGC34761 protein protein.     30   1.8  
AK074773-1|BAC11199.1|  446|Homo sapiens protein ( Homo sapiens ...    30   1.8  
AF521893-1|AAP80866.1|  446|Homo sapiens unnamed secretory prote...    30   1.8  
AF428259-1|AAP97299.1|  303|Homo sapiens hypothetical protein pr...    30   1.8  

>AK124693-1|BAC85927.1|  206|Homo sapiens protein ( Homo sapiens
           cDNA FLJ42703 fis, clone BRAMY3005932, moderately
           similar to Diacylglycerol kinase, zeta (EC 2.7.1.107).
           ).
          Length = 206

 Score = 34.7 bits (76), Expect = 0.085
 Identities = 19/67 (28%), Positives = 28/67 (41%)

Query: 39  GMGYLGNPCPESEDVCVKLIERKGAQEVITRDCLSNFRAFRTDIPADTYEGCRPAAKDLN 98
           GMGY  +PC  S + C+      G + +      +     +TD   DT       A+D  
Sbjct: 124 GMGYTASPCSPSGETCLHQAAALGQRTICHYIVEAGASLMKTDQQGDTPRQRAEKAQDTE 183

Query: 99  LAHYVNN 105
           LA Y+ N
Sbjct: 184 LAAYLEN 190


>AY358373-1|AAQ88739.1|  455|Homo sapiens LHPE306 protein.
          Length = 455

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 16/60 (26%), Positives = 23/60 (38%), Gaps = 5/60 (8%)

Query: 12  IIPIGLATWCYQCTAATPGCNEPFNWRGMGYLGNPCPESEDVCVKLIERKGAQEVITRDC 71
           IIP     WC  CTA+  GC     ++   + G  C    + C    +  G   + T  C
Sbjct: 195 IIPYKKGAWCSLCTASVSGC-----FKAWDHAGGLCEVPRNPCRMSCQNHGRLNISTCHC 249


>BC141808-1|AAI41809.1|  446|Homo sapiens LOC348174 protein protein.
          Length = 446

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 15/60 (25%), Positives = 23/60 (38%), Gaps = 5/60 (8%)

Query: 12  IIPIGLATWCYQCTAATPGCNEPFNWRGMGYLGNPCPESEDVCVKLIERKGAQEVITRDC 71
           I+P     WC  CTA+  GC     ++   + G  C    + C    +  G   + T  C
Sbjct: 195 IVPYKKGAWCSLCTASVSGC-----FKAWDHAGGLCEVPRNPCRMSCQNHGRLNISTCHC 249


>BC078143-1|AAH78143.1|  446|Homo sapiens secretory protein
           LOC348174 protein.
          Length = 446

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 15/60 (25%), Positives = 23/60 (38%), Gaps = 5/60 (8%)

Query: 12  IIPIGLATWCYQCTAATPGCNEPFNWRGMGYLGNPCPESEDVCVKLIERKGAQEVITRDC 71
           I+P     WC  CTA+  GC     ++   + G  C    + C    +  G   + T  C
Sbjct: 195 IVPYKKGAWCSLCTASVSGC-----FKAWDHAGGLCEVPRNPCRMSCQNHGRLNISTCHC 249


>BC039068-1|AAH39068.1|  301|Homo sapiens MGC34761 protein protein.
          Length = 301

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 15/60 (25%), Positives = 23/60 (38%), Gaps = 5/60 (8%)

Query: 12  IIPIGLATWCYQCTAATPGCNEPFNWRGMGYLGNPCPESEDVCVKLIERKGAQEVITRDC 71
           I+P     WC  CTA+  GC     ++   + G  C    + C    +  G   + T  C
Sbjct: 157 IVPYKKGAWCSLCTASVSGC-----FKAWDHAGGLCEVPRNPCRMSCQNHGRLNISTCHC 211


>AK074773-1|BAC11199.1|  446|Homo sapiens protein ( Homo sapiens
           cDNA FLJ90292 fis, clone NT2RP1001563, highly similar to
           Secretory protein LOC348174. ).
          Length = 446

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 15/60 (25%), Positives = 23/60 (38%), Gaps = 5/60 (8%)

Query: 12  IIPIGLATWCYQCTAATPGCNEPFNWRGMGYLGNPCPESEDVCVKLIERKGAQEVITRDC 71
           I+P     WC  CTA+  GC     ++   + G  C    + C    +  G   + T  C
Sbjct: 195 IVPYKKGAWCSLCTASVSGC-----FKAWDHAGGLCEVPRNPCRMSCQNHGRLNISTCHC 249


>AF521893-1|AAP80866.1|  446|Homo sapiens unnamed secretory protein
           protein.
          Length = 446

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 15/60 (25%), Positives = 23/60 (38%), Gaps = 5/60 (8%)

Query: 12  IIPIGLATWCYQCTAATPGCNEPFNWRGMGYLGNPCPESEDVCVKLIERKGAQEVITRDC 71
           I+P     WC  CTA+  GC     ++   + G  C    + C    +  G   + T  C
Sbjct: 195 IVPYKKGAWCSLCTASVSGC-----FKAWDHAGGLCEVPRNPCRMSCQNHGRLNISTCHC 249


>AF428259-1|AAP97299.1|  303|Homo sapiens hypothetical protein
           protein.
          Length = 303

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 15/60 (25%), Positives = 23/60 (38%), Gaps = 5/60 (8%)

Query: 12  IIPIGLATWCYQCTAATPGCNEPFNWRGMGYLGNPCPESEDVCVKLIERKGAQEVITRDC 71
           I+P     WC  CTA+  GC     ++   + G  C    + C    +  G   + T  C
Sbjct: 195 IVPYKKGAWCSLCTASVSGC-----FKAWDHAGGLCEVPRNPCRMSCQNHGRLNISTCHC 249


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.322    0.138    0.440 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,305,494
Number of Sequences: 224733
Number of extensions: 829115
Number of successful extensions: 1015
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1007
Number of HSP's gapped (non-prelim): 8
length of query: 124
length of database: 73,234,838
effective HSP length: 81
effective length of query: 43
effective length of database: 55,031,465
effective search space: 2366352995
effective search space used: 2366352995
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 59 (27.9 bits)