Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000997-TA|BGIBMGA000997-PA|IPR002048|Calcium-binding
EF-hand
         (285 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    25   0.85 
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           24   1.5  

>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 24.6 bits (51), Expect = 0.85
 Identities = 10/28 (35%), Positives = 18/28 (64%)

Query: 16  SNTSQKDNNIEGSLEEKNTDHPDENRDN 43
           SN+S+K ++I+   +   T H D+N +N
Sbjct: 258 SNSSEKKSSIQHGDDAHKTHHLDKNPEN 285


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 10/31 (32%), Positives = 17/31 (54%)

Query: 13  PTLSNTSQKDNNIEGSLEEKNTDHPDENRDN 43
           P+ SN    +NN   S      ++P++NR+N
Sbjct: 369 PSTSNNRWHNNNGNNSNNHWRKNNPNDNRNN 399


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.311    0.133    0.372 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,383
Number of Sequences: 317
Number of extensions: 2302
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of query: 285
length of database: 114,650
effective HSP length: 56
effective length of query: 229
effective length of database: 96,898
effective search space: 22189642
effective search space used: 22189642
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 43 (21.4 bits)