GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000997-TA|BGIBMGA000997-PA|IPR002048|Calcium-binding
EF-hand
         (285 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-12|CAD27934.1|  160|Anopheles gambiae putative MLC1 pro...    29   0.11 
AY070254-1|AAL59653.1|  225|Anopheles gambiae glutathione S-tran...    29   0.20 
AY070255-1|AAL59654.1|  230|Anopheles gambiae glutathione S-tran...    27   0.46 
AJ973472-1|CAJ01519.1|  168|Anopheles gambiae hypothetical prote...    24   5.7  
AJ697732-1|CAG26925.1|  168|Anopheles gambiae putative chemosens...    24   5.7  
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    23   7.5  
Z22930-3|CAA80515.1|  275|Anopheles gambiae trypsin protein.           23   9.9  
AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.           23   9.9  

>AJ439353-12|CAD27934.1|  160|Anopheles gambiae putative MLC1
           protein protein.
          Length = 160

 Score = 29.5 bits (63), Expect = 0.11
 Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 5/78 (6%)

Query: 172 EGHITFEQFLKMVTIRQRDFE---IEDELRSSLQVFDPGRTGTIDREYFREVLAKQGHKM 228
           E  I FE+FL + +  +++ E    ED L   L+++D    GT+        L   G ++
Sbjct: 60  EKKIKFEEFLPIFSQVKKEKEQGCFEDFLEC-LKLYDKNEDGTMLLAELTHSLTALGERL 118

Query: 229 PQKQLDNLIKE-VDMSND 245
              +LDN++K+ +D  +D
Sbjct: 119 DDVELDNVMKDCMDPEDD 136



 Score = 23.0 bits (47), Expect = 9.9
 Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 1/50 (2%)

Query: 133 DGYITEKELVYMLKSLLLMTYTPEQLEELIAYCVRPSHAEGHITFEQFLK 182
           DG +   EL + L +L       E L+ ++  C+ P   +G+I +  FLK
Sbjct: 99  DGTMLLAELTHSLTALGERLDDVE-LDNVMKDCMDPEDDDGNIPYAPFLK 147


>AY070254-1|AAL59653.1|  225|Anopheles gambiae glutathione
           S-transferase E4 protein.
          Length = 225

 Score = 28.7 bits (61), Expect = 0.20
 Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 1/52 (1%)

Query: 204 FDPGRTGTIDREYFREVLAKQGHKMPQKQLDNLIKEVDMSNDGTIGIEDVVG 255
           FD G      R Y   +L     + PQ+++DNL +  ++ ND T+  E +VG
Sbjct: 104 FDSGVLFARFRFYLEPILYYGATETPQEKIDNLYRAYELLND-TLVDEYIVG 154


>AY070255-1|AAL59654.1|  230|Anopheles gambiae glutathione
           S-transferase E5 protein.
          Length = 230

 Score = 27.5 bits (58), Expect = 0.46
 Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 2/58 (3%)

Query: 204 FDPGRTGTIDREYFREVLAKQGHKMPQKQLDNLIKEVDMSNDGTIGIEDVVGTMCIDL 261
           FD G   +  R YF  +L +   ++PQ ++D + K  ++ ND    +ED +    + L
Sbjct: 106 FDSGVLFSRLRFYFEPILYEGSAEVPQDKIDYMKKGYELLNDAL--VEDYIAGSSLTL 161


>AJ973472-1|CAJ01519.1|  168|Anopheles gambiae hypothetical protein
           protein.
          Length = 168

 Score = 23.8 bits (49), Expect = 5.7
 Identities = 11/26 (42%), Positives = 13/26 (50%)

Query: 108 RPDQLAEVEQLWDVYQNYTPAYTDID 133
           RPD  A +EQL+D    Y   Y   D
Sbjct: 96  RPDDFAILEQLYDPTGEYRRKYMQSD 121


>AJ697732-1|CAG26925.1|  168|Anopheles gambiae putative chemosensory
           protein CSP3 protein.
          Length = 168

 Score = 23.8 bits (49), Expect = 5.7
 Identities = 11/26 (42%), Positives = 13/26 (50%)

Query: 108 RPDQLAEVEQLWDVYQNYTPAYTDID 133
           RPD  A +EQL+D    Y   Y   D
Sbjct: 96  RPDDFAILEQLYDPTGEYRRKYMQSD 121


>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 23.4 bits (48), Expect = 7.5
 Identities = 12/41 (29%), Positives = 21/41 (51%)

Query: 208 RTGTIDREYFREVLAKQGHKMPQKQLDNLIKEVDMSNDGTI 248
           +T    +E F   L +  H+M     D+L+K +D + D T+
Sbjct: 225 KTTLYHKELFAAALDRILHEMRVDTPDDLVKALDKACDATM 265


>Z22930-3|CAA80515.1|  275|Anopheles gambiae trypsin protein.
          Length = 275

 Score = 23.0 bits (47), Expect = 9.9
 Identities = 11/41 (26%), Positives = 21/41 (51%)

Query: 155 PEQLEELIAYCVRPSHAEGHITFEQFLKMVTIRQRDFEIED 195
           P+  +E I Y       E  +TF   ++ +T+ ++D  +ED
Sbjct: 124 PDYDQETIDYDYSLLELESVLTFSNKVQPITLPEQDEAVED 164


>AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.
          Length = 897

 Score = 23.0 bits (47), Expect = 9.9
 Identities = 22/96 (22%), Positives = 44/96 (45%), Gaps = 13/96 (13%)

Query: 133 DGYITEKELVYMLKSLLLMTYTPEQLE------ELIAYCVRPSHA-EGHIT---FEQFL- 181
           D Y+ +++ ++    L L    PE L        ++   V  +H  +G  T   ++Q L 
Sbjct: 570 DSYLKQRKTIHFFPVLFLAAINPEHLSYFHFVGRILGIAVFHNHVLDGGFTLPFYKQLLN 629

Query: 182 KMVTIRQRDFEIEDELRSSLQ-VFDPGRTGTIDREY 216
           K +T+   + +++ +L  SL  + +   TG ID  +
Sbjct: 630 KPITLSDIE-DVDPDLHRSLTWILENNITGIIDSTF 664


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.311    0.133    0.372 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 261,154
Number of Sequences: 2123
Number of extensions: 9491
Number of successful extensions: 26
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 18
Number of HSP's gapped (non-prelim): 9
length of query: 285
length of database: 516,269
effective HSP length: 63
effective length of query: 222
effective length of database: 382,520
effective search space: 84919440
effective search space used: 84919440
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 47 (23.0 bits)