Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000996-TA|BGIBMGA000996-PA|undefined
(127 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen... 30 0.58
Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen... 30 0.58
U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein ... 30 0.58
U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein ... 30 0.58
U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV) coll... 30 0.58
Z82278-10|CAC15860.2| 390|Caenorhabditis elegans Hypothetical p... 29 0.77
AL132943-14|CAC14395.2| 390|Caenorhabditis elegans Hypothetical... 29 0.77
Z47809-7|CAA87783.1| 662|Caenorhabditis elegans Hypothetical pr... 27 4.1
Z47808-10|CAA87778.1| 662|Caenorhabditis elegans Hypothetical p... 27 4.1
Z69884-9|CAI79224.1| 155|Caenorhabditis elegans Hypothetical pr... 27 5.4
U80445-1|AAB37794.1| 855|Caenorhabditis elegans Hypothetical pr... 26 7.2
AF039719-2|AAB96757.1| 827|Caenorhabditis elegans Blistered cut... 26 7.2
Z77660-8|CAB01178.2| 193|Caenorhabditis elegans Hypothetical pr... 26 9.5
U55365-2|AAA98568.1| 184|Caenorhabditis elegans Hypothetical pr... 26 9.5
U13070-7|AAC46638.1| 414|Caenorhabditis elegans Rabaptin (rab e... 26 9.5
AL132862-2|CAB70224.1| 1019|Caenorhabditis elegans Hypothetical ... 26 9.5
>Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1759
Score = 29.9 bits (64), Expect = 0.58
Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 4/74 (5%)
Query: 3 LEVLLTTVLAISYLKVEISCLSRRCIQCRSRGELGSCGDPLPFNISDPEAEHGVHITACP 62
L + + +LA+SY++ + +C C GE GS G P P P G+ P
Sbjct: 11 LRLAILALLAVSYVQSQATCRDCSNRGCFCVGEKGSMGAPGP---QGPPGTQGIRGFPGP 67
Query: 63 SGWCA-KRIQGTTG 75
G K ++G G
Sbjct: 68 EGLAGPKGLKGAQG 81
>Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1758
Score = 29.9 bits (64), Expect = 0.58
Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 4/74 (5%)
Query: 3 LEVLLTTVLAISYLKVEISCLSRRCIQCRSRGELGSCGDPLPFNISDPEAEHGVHITACP 62
L + + +LA+SY++ + +C C GE GS G P P P G+ P
Sbjct: 11 LRLAILALLAVSYVQSQATCRDCSNRGCFCVGEKGSMGAPGP---QGPPGTQGIRGFPGP 67
Query: 63 SGWCA-KRIQGTTG 75
G K ++G G
Sbjct: 68 EGLAGPKGLKGAQG 81
>U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein
2, isoform a protein.
Length = 1758
Score = 29.9 bits (64), Expect = 0.58
Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 4/74 (5%)
Query: 3 LEVLLTTVLAISYLKVEISCLSRRCIQCRSRGELGSCGDPLPFNISDPEAEHGVHITACP 62
L + + +LA+SY++ + +C C GE GS G P P P G+ P
Sbjct: 11 LRLAILALLAVSYVQSQATCRDCSNRGCFCVGEKGSMGAPGP---QGPPGTQGIRGFPGP 67
Query: 63 SGWCA-KRIQGTTG 75
G K ++G G
Sbjct: 68 EGLAGPKGLKGAQG 81
>U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein
2, isoform b protein.
Length = 1759
Score = 29.9 bits (64), Expect = 0.58
Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 4/74 (5%)
Query: 3 LEVLLTTVLAISYLKVEISCLSRRCIQCRSRGELGSCGDPLPFNISDPEAEHGVHITACP 62
L + + +LA+SY++ + +C C GE GS G P P P G+ P
Sbjct: 11 LRLAILALLAVSYVQSQATCRDCSNRGCFCVGEKGSMGAPGP---QGPPGTQGIRGFPGP 67
Query: 63 SGWCA-KRIQGTTG 75
G K ++G G
Sbjct: 68 EGLAGPKGLKGAQG 81
>U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV)
collagen protein.
Length = 1795
Score = 29.9 bits (64), Expect = 0.58
Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 4/74 (5%)
Query: 3 LEVLLTTVLAISYLKVEISCLSRRCIQCRSRGELGSCGDPLPFNISDPEAEHGVHITACP 62
L + + +LA+SY++ + +C C GE GS G P P P G+ P
Sbjct: 11 LRLAILALLAVSYVQSQATCRDCSNRGCFCVGEKGSMGAPGP---QGPPGTQGIRGFPGP 67
Query: 63 SGWCA-KRIQGTTG 75
G K ++G G
Sbjct: 68 EGLAGPKGLKGAQG 81
>Z82278-10|CAC15860.2| 390|Caenorhabditis elegans Hypothetical
protein Y116F11B.2 protein.
Length = 390
Score = 29.5 bits (63), Expect = 0.77
Identities = 25/80 (31%), Positives = 33/80 (41%), Gaps = 2/80 (2%)
Query: 27 CIQCRSRGELGSCGDPLPFNISDPEAEHGVHITACPSG-WCAKRIQGTTGTFRTDDYGAV 85
C+Q + G G+P N P E V I +G C+ Q +GTF + DYG
Sbjct: 71 CLQVYNNDCFGE-GNPDADNWCVPVDEVPVTIDINAAGDQCSSTFQCPSGTFASFDYGEP 129
Query: 86 TERSCLQQPPSDYEERCAYT 105
TE S + CA T
Sbjct: 130 TEESGVNAGMDPVTITCAET 149
>AL132943-14|CAC14395.2| 390|Caenorhabditis elegans Hypothetical
protein Y116F11B.2 protein.
Length = 390
Score = 29.5 bits (63), Expect = 0.77
Identities = 25/80 (31%), Positives = 33/80 (41%), Gaps = 2/80 (2%)
Query: 27 CIQCRSRGELGSCGDPLPFNISDPEAEHGVHITACPSG-WCAKRIQGTTGTFRTDDYGAV 85
C+Q + G G+P N P E V I +G C+ Q +GTF + DYG
Sbjct: 71 CLQVYNNDCFGE-GNPDADNWCVPVDEVPVTIDINAAGDQCSSTFQCPSGTFASFDYGEP 129
Query: 86 TERSCLQQPPSDYEERCAYT 105
TE S + CA T
Sbjct: 130 TEESGVNAGMDPVTITCAET 149
>Z47809-7|CAA87783.1| 662|Caenorhabditis elegans Hypothetical
protein D2013.9 protein.
Length = 662
Score = 27.1 bits (57), Expect = 4.1
Identities = 13/48 (27%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
Query: 67 AKRIQGTTGTF-RTDDYGAVTERSCLQQPPSDYEERCAYTMWKYKRVY 113
AK+I TG R + A + P ++ E+ +WKY + Y
Sbjct: 140 AKKISSETGNLPRHESVDARLSSYSVDDPKNELTEKVLKALWKYSQTY 187
>Z47808-10|CAA87778.1| 662|Caenorhabditis elegans Hypothetical
protein D2013.9 protein.
Length = 662
Score = 27.1 bits (57), Expect = 4.1
Identities = 13/48 (27%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
Query: 67 AKRIQGTTGTF-RTDDYGAVTERSCLQQPPSDYEERCAYTMWKYKRVY 113
AK+I TG R + A + P ++ E+ +WKY + Y
Sbjct: 140 AKKISSETGNLPRHESVDARLSSYSVDDPKNELTEKVLKALWKYSQTY 187
>Z69884-9|CAI79224.1| 155|Caenorhabditis elegans Hypothetical
protein F31F6.8 protein.
Length = 155
Score = 26.6 bits (56), Expect = 5.4
Identities = 19/74 (25%), Positives = 25/74 (33%), Gaps = 6/74 (8%)
Query: 49 DPEAEHGVHITACPSGWCAKRIQGTTGTFRTDDYGAVTERSCLQQPPSDYEERCAYTMWK 108
D GV C +G C K I F+ RSC+ C
Sbjct: 67 DQALRDGVRSNECSNGVCMKMI------FQEKSGINHVWRSCIPNAKEQIRSDCTKITSG 120
Query: 109 YKRVYVCFCNGDLC 122
+ VC C+G+LC
Sbjct: 121 EGNLEVCTCDGNLC 134
>U80445-1|AAB37794.1| 855|Caenorhabditis elegans Hypothetical
protein C50F2.3 protein.
Length = 855
Score = 26.2 bits (55), Expect = 7.2
Identities = 8/21 (38%), Positives = 13/21 (61%)
Query: 97 DYEERCAYTMWKYKRVYVCFC 117
D ERC + K R+++C+C
Sbjct: 104 DTYERCLMRLHKMPRIWICYC 124
>AF039719-2|AAB96757.1| 827|Caenorhabditis elegans Blistered
cuticle protein 4, isoformc protein.
Length = 827
Score = 26.2 bits (55), Expect = 7.2
Identities = 18/81 (22%), Positives = 33/81 (40%), Gaps = 2/81 (2%)
Query: 24 SRRCIQCRSRGELGSC-GDPLPFNISD-PEAEHGVHITACPSGWCAKRIQGTTGTFRTDD 81
S C C +C G L ++ + P +HG + +CP G A + + ++
Sbjct: 731 SSHCHTCTKAEVCETCPGSLLLIDVDNMPHYDHGKCVESCPPGLVADYAENFDFCAKNNE 790
Query: 82 YGAVTERSCLQQPPSDYEERC 102
G T + PS +++ C
Sbjct: 791 SGRDTTVFVKFKKPSAFKDYC 811
>Z77660-8|CAB01178.2| 193|Caenorhabditis elegans Hypothetical
protein F38H4.10 protein.
Length = 193
Score = 25.8 bits (54), Expect = 9.5
Identities = 10/22 (45%), Positives = 15/22 (68%)
Query: 92 QQPPSDYEERCAYTMWKYKRVY 113
+Q P+D+EERC M + R+Y
Sbjct: 116 KQFPTDFEERCQAIMRRLFRIY 137
>U55365-2|AAA98568.1| 184|Caenorhabditis elegans Hypothetical
protein C12D5.4 protein.
Length = 184
Score = 25.8 bits (54), Expect = 9.5
Identities = 8/14 (57%), Positives = 10/14 (71%)
Query: 109 YKRVYVCFCNGDLC 122
Y VY+C+CN LC
Sbjct: 152 YASVYLCYCNTHLC 165
>U13070-7|AAC46638.1| 414|Caenorhabditis elegans Rabaptin (rab
effector) protein 5 protein.
Length = 414
Score = 25.8 bits (54), Expect = 9.5
Identities = 10/33 (30%), Positives = 17/33 (51%)
Query: 70 IQGTTGTFRTDDYGAVTERSCLQQPPSDYEERC 102
+Q T G T ER+ ++Q +Y++RC
Sbjct: 269 LQTTVGELETQVQQVQNERAAVEQTAQNYKQRC 301
>AL132862-2|CAB70224.1| 1019|Caenorhabditis elegans Hypothetical
protein Y73F8A.5 protein.
Length = 1019
Score = 25.8 bits (54), Expect = 9.5
Identities = 19/69 (27%), Positives = 25/69 (36%), Gaps = 8/69 (11%)
Query: 61 CPSGWCAKRIQGTTGTFRTDDYGAVTERSCLQQPP---SDY---EERCAYTMWK--YKRV 112
C G + + G G Y C+ +PP SDY E C + YK+V
Sbjct: 287 CSPGSFSSKGSGQCGRCPESQYSGFKSEKCIDRPPCRVSDYYPVREPCTNGSSRAVYKKV 346
Query: 113 YVCFCNGDL 121
C DL
Sbjct: 347 LPSICRDDL 355
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.324 0.138 0.458
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,552,013
Number of Sequences: 27539
Number of extensions: 146887
Number of successful extensions: 342
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 330
Number of HSP's gapped (non-prelim): 17
length of query: 127
length of database: 12,573,161
effective HSP length: 73
effective length of query: 54
effective length of database: 10,562,814
effective search space: 570391956
effective search space used: 570391956
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 54 (25.8 bits)
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