Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000995-TA|BGIBMGA000995-PA|IPR000156|RanBP1
(212 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82243-1|CAI17926.1| 468|Homo sapiens nucleoporin 50kDa protein. 132 7e-31
CR456533-1|CAG30419.1| 468|Homo sapiens NUP50 protein. 132 7e-31
BC070133-1|AAH70133.1| 468|Homo sapiens nucleoporin 50kDa protein. 132 7e-31
BC028125-1|AAH28125.1| 440|Homo sapiens nucleoporin 50kDa protein. 132 7e-31
BC016055-1|AAH16055.1| 440|Homo sapiens NUP50 protein protein. 132 7e-31
AL008718-1|CAI17944.1| 468|Homo sapiens nucleoporin 50kDa protein. 132 7e-31
AF107840-1|AAD53401.1| 468|Homo sapiens nuclear pore-associated... 132 7e-31
AL389950-1|CAB97528.1| 178|Homo sapiens NPAP60L, nucleoporin pr... 50 5e-06
AL389949-1|CAB97527.1| 179|Homo sapiens NPAP60L, nucleoporin pr... 50 5e-06
L41840-1|AAC41758.1| 3224|Homo sapiens nucleoporin protein. 44 5e-04
D42063-1|BAA07662.1| 3224|Homo sapiens RanBP2 (Ran-binding prote... 44 5e-04
AC010095-2|AAY14984.1| 3224|Homo sapiens unknown protein. 44 5e-04
AB209483-1|BAD92720.1| 3138|Homo sapiens RAN binding protein 2 v... 44 5e-04
U19240-1|AAA85837.1| 215|Homo sapiens Ran binding protein protein. 38 0.026
BC036895-1|AAH36895.1| 608|Homo sapiens AFF3 protein protein. 38 0.026
AK092327-1|BAC03864.1| 781|Homo sapiens protein ( Homo sapiens ... 38 0.026
U34360-1|AAA98763.1| 1227|Homo sapiens LAF-4 protein. 37 0.060
BC103660-1|AAI03661.1| 544|Homo sapiens RBM15 protein protein. 33 0.73
BC103507-1|AAI03508.1| 969|Homo sapiens RBM15 protein protein. 33 0.73
BC103493-1|AAI03494.1| 969|Homo sapiens RBM15 protein protein. 33 0.73
BC098140-1|AAH98140.1| 969|Homo sapiens RBM15 protein protein. 33 0.73
BC062316-1|AAH62316.1| 957|Homo sapiens RBM15 protein protein. 33 0.73
BC047479-1|AAH47479.1| 959|Homo sapiens RBM15 protein protein. 33 0.73
BC006397-1|AAH06397.2| 957|Homo sapiens RBM15 protein protein. 33 0.73
AL355488-1|CAI19077.1| 977|Homo sapiens RNA binding motif prote... 33 0.73
AK025596-1|BAB15185.1| 532|Homo sapiens protein ( Homo sapiens ... 33 0.73
AK022541-1|BAB14088.1| 925|Homo sapiens protein ( Homo sapiens ... 33 0.73
AJ303090-1|CAC38829.1| 1883|Homo sapiens OTT-MAL protein. 33 0.73
AJ303089-1|CAC38828.1| 1905|Homo sapiens OTT-MAL protein. 33 0.73
AJ297259-2|CAC38862.1| 969|Homo sapiens one twenty two protein ... 33 0.73
AJ297259-1|CAC38861.1| 957|Homo sapiens one twenty two protein ... 33 0.73
AF368064-1|AAK54724.1| 957|Homo sapiens putative RNA-binding mo... 33 0.73
AF368063-1|AAK54723.1| 977|Homo sapiens putative RNA-binding mo... 33 0.73
AF368062-1|AAK54722.1| 969|Homo sapiens putative RNA-binding mo... 33 0.73
AB209680-1|BAD92917.1| 316|Homo sapiens RNA binding motif prote... 33 0.73
BC130418-1|AAI30419.1| 1153|Homo sapiens ARID4B protein protein. 33 0.97
BC050132-1|AAH50132.1| 486|Homo sapiens thioredoxin domain cont... 33 0.97
AL391994-7|CAI13752.1| 1071|Homo sapiens AT rich interactive dom... 33 0.97
AL391994-6|CAI13751.1| 1226|Homo sapiens AT rich interactive dom... 33 0.97
AL391994-2|CAI13747.1| 1310|Homo sapiens AT rich interactive dom... 33 0.97
AL391994-1|CAI13746.1| 927|Homo sapiens AT rich interactive dom... 33 0.97
AL133418-7|CAI22963.1| 1071|Homo sapiens AT rich interactive dom... 33 0.97
AL133418-6|CAI22962.1| 1226|Homo sapiens AT rich interactive dom... 33 0.97
AL133418-5|CAI22961.1| 1310|Homo sapiens AT rich interactive dom... 33 0.97
AL133418-1|CAI22958.1| 927|Homo sapiens AT rich interactive dom... 33 0.97
AK097656-1|BAC05133.1| 553|Homo sapiens protein ( Homo sapiens ... 33 0.97
AF227899-1|AAF36964.1| 873|Homo sapiens breast carcinoma-associ... 33 0.97
AF214114-1|AAF28341.2| 1226|Homo sapiens retinoblastoma-binding ... 33 0.97
AF208045-1|AAF23433.3| 1213|Homo sapiens breast cancer-associate... 33 0.97
AF080095-1|AAK94950.1| 486|Homo sapiens sperm-specific thioredo... 33 0.97
AB210032-1|BAE06114.1| 1325|Homo sapiens ARID4B variant protein ... 33 0.97
AB030181-1|BAA89794.1| 803|Homo sapiens RBP1-like protein protein. 33 0.97
AJ606308-1|CAE54436.1| 4262|Homo sapiens secreted mucin MUC17 pr... 32 1.3
AJ606307-1|CAE54435.1| 4493|Homo sapiens membrane mucin MUC17 pr... 32 1.3
U20979-1|AAA76736.1| 938|Homo sapiens chromatin assembly factor... 31 3.0
U05237-1|AAA97522.1| 810|Homo sapiens FAC1 protein. 31 3.9
BC067093-1|AAH67093.1| 956|Homo sapiens chromatin assembly fact... 31 3.9
AY282495-1|AAP22284.1| 2764|Homo sapiens bromodomain PHD finger ... 31 3.9
AF190465-2|AAF04291.1| 938|Homo sapiens chromatin assembly fact... 31 3.9
Z83844-3|CAI20370.2| 701|Homo sapiens SH3-domain binding protei... 30 6.8
X54162-1|CAA38101.1| 572|Homo sapiens 64 Kd autoantigen protein. 30 6.8
CR456576-1|CAG30462.1| 701|Homo sapiens SH3BP1 protein. 30 6.8
BC080187-1|AAH80187.1| 600|Homo sapiens leiomodin 1 (smooth mus... 30 6.8
BC008282-1|AAH08282.1| 621|Homo sapiens SH3BP1 protein protein. 30 6.8
AY364241-1|AAQ76800.1| 632|Homo sapiens SH3 domain binding prot... 30 6.8
AY283618-1|AAP37483.1| 1564|Homo sapiens hypothetical protein pr... 30 6.8
AY220790-1|AAO63590.1| 1312|Homo sapiens SIN3A-associated protei... 30 6.8
AL513217-2|CAH72278.1| 631|Homo sapiens leiomodin 1 (smooth mus... 30 6.8
AL445232-2|CAI16506.2| 1564|Homo sapiens zinc finger CCCH-type c... 30 6.8
AL445232-1|CAI16505.1| 1668|Homo sapiens zinc finger CCCH-type c... 30 6.8
AL157758-3|CAM13064.1| 1564|Homo sapiens zinc finger CCCH-type c... 30 6.8
AL157758-2|CAI10903.1| 1668|Homo sapiens zinc finger CCCH-type c... 30 6.8
AK126873-1|BAC86732.1| 605|Homo sapiens protein ( Homo sapiens ... 30 6.8
AK126556-1|BAC86592.1| 517|Homo sapiens protein ( Homo sapiens ... 30 6.8
AF177377-1|AAG09279.2| 981|Homo sapiens cytoplasmic protein pro... 30 6.8
AC006038-1|AAY15086.1| 911|Homo sapiens unknown protein. 30 6.8
AB020660-1|BAA74876.1| 967|Homo sapiens KIAA0853 protein protein. 30 6.8
BC065540-1|AAH65540.1| 631|Homo sapiens PABPC4 protein protein. 29 9.0
AY584611-1|AAS91740.1| 2367|Homo sapiens GPR158-like 1 receptor ... 29 9.0
AL121581-3|CAC17005.1| 1121|Homo sapiens myelin transcription fa... 29 9.0
AK123158-1|BAC85544.1| 572|Homo sapiens protein ( Homo sapiens ... 29 9.0
AB020642-1|BAA74858.2| 1167|Homo sapiens KIAA0835 protein protein. 29 9.0
>Z82243-1|CAI17926.1| 468|Homo sapiens nucleoporin 50kDa protein.
Length = 468
Score = 132 bits (320), Expect = 7e-31
Identities = 71/162 (43%), Positives = 101/162 (62%), Gaps = 6/162 (3%)
Query: 54 TDESSPSSDGSPLKFGAPSLTSTNTNNTEPANQEDEDVPPKVEFTPIAEENSVFDKRCKV 113
T +S P S P K ++ + ++E+ D PPKV T + EE++ + K+CK+
Sbjct: 307 TTQSKPVSSPFPTK-PLEGQAEGDSGECKGGDEEENDEPPKVVVTEVKEEDAFYSKKCKL 365
Query: 114 FVKKDGNFVDKGVGTLYIKKIENSDKHQLLVRANTALGNILLNLRLSAGIPTQRMGKNNV 173
F KKD F +KG+GTL++K N K QLLVRA+T LGNILLN+ + +P R GKNNV
Sbjct: 366 FYKKDNEFKEKGIGTLHLKPTAN-QKTQLLVRADTNLGNILLNVLIPPNMPCTRTGKNNV 424
Query: 174 MIICIPTP--DSK--PPPTSVLIRVKTPEEADEVLETLNKYK 211
+I+C+P P D K P ++LIRVKT E+ADE+ + L + K
Sbjct: 425 LIVCVPNPPIDEKNATMPVTMLIRVKTSEDADELHKILLEKK 466
Score = 50.4 bits (115), Expect = 5e-06
Identities = 24/46 (52%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Query: 4 KRQATTDLNHENWDQEDPEENKEMGTFKAAPKDILEKRVIKTAKRR 49
KR A +L NWDQED E +E+GTF A +++L+ R IK AKRR
Sbjct: 3 KRNAEKELTDRNWDQED--EAEEVGTFSMASEEVLKNRAIKKAKRR 46
>CR456533-1|CAG30419.1| 468|Homo sapiens NUP50 protein.
Length = 468
Score = 132 bits (320), Expect = 7e-31
Identities = 71/162 (43%), Positives = 101/162 (62%), Gaps = 6/162 (3%)
Query: 54 TDESSPSSDGSPLKFGAPSLTSTNTNNTEPANQEDEDVPPKVEFTPIAEENSVFDKRCKV 113
T +S P S P K ++ + ++E+ D PPKV T + EE++ + K+CK+
Sbjct: 307 TTQSKPVSSPFPTK-PLEGQAEGDSGECKGGDEEENDEPPKVVVTEVKEEDAFYSKKCKL 365
Query: 114 FVKKDGNFVDKGVGTLYIKKIENSDKHQLLVRANTALGNILLNLRLSAGIPTQRMGKNNV 173
F KKD F +KG+GTL++K N K QLLVRA+T LGNILLN+ + +P R GKNNV
Sbjct: 366 FYKKDNEFKEKGIGTLHLKPTAN-QKTQLLVRADTNLGNILLNVLIPPNMPCTRTGKNNV 424
Query: 174 MIICIPTP--DSK--PPPTSVLIRVKTPEEADEVLETLNKYK 211
+I+C+P P D K P ++LIRVKT E+ADE+ + L + K
Sbjct: 425 LIVCVPNPPIDEKNATMPVTMLIRVKTSEDADELHKILLEKK 466
Score = 50.4 bits (115), Expect = 5e-06
Identities = 24/46 (52%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Query: 4 KRQATTDLNHENWDQEDPEENKEMGTFKAAPKDILEKRVIKTAKRR 49
KR A +L NWDQED E +E+GTF A +++L+ R IK AKRR
Sbjct: 3 KRNAEKELTDRNWDQED--EAEEVGTFSMASEEVLKNRAIKKAKRR 46
>BC070133-1|AAH70133.1| 468|Homo sapiens nucleoporin 50kDa protein.
Length = 468
Score = 132 bits (320), Expect = 7e-31
Identities = 71/162 (43%), Positives = 101/162 (62%), Gaps = 6/162 (3%)
Query: 54 TDESSPSSDGSPLKFGAPSLTSTNTNNTEPANQEDEDVPPKVEFTPIAEENSVFDKRCKV 113
T +S P S P K ++ + ++E+ D PPKV T + EE++ + K+CK+
Sbjct: 307 TTQSKPVSSPFPTK-PLEGQAEGDSGECKGGDEEENDEPPKVVVTEVKEEDAFYSKKCKL 365
Query: 114 FVKKDGNFVDKGVGTLYIKKIENSDKHQLLVRANTALGNILLNLRLSAGIPTQRMGKNNV 173
F KKD F +KG+GTL++K N K QLLVRA+T LGNILLN+ + +P R GKNNV
Sbjct: 366 FYKKDNEFKEKGIGTLHLKPTAN-QKTQLLVRADTNLGNILLNVLIPPNMPCTRTGKNNV 424
Query: 174 MIICIPTP--DSK--PPPTSVLIRVKTPEEADEVLETLNKYK 211
+I+C+P P D K P ++LIRVKT E+ADE+ + L + K
Sbjct: 425 LIVCVPNPPIDEKNATMPVTMLIRVKTSEDADELHKILLEKK 466
Score = 50.4 bits (115), Expect = 5e-06
Identities = 24/46 (52%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Query: 4 KRQATTDLNHENWDQEDPEENKEMGTFKAAPKDILEKRVIKTAKRR 49
KR A +L NWDQED E +E+GTF A +++L+ R IK AKRR
Sbjct: 3 KRNAEKELTDRNWDQED--EAEEVGTFSMASEEVLKNRAIKKAKRR 46
>BC028125-1|AAH28125.1| 440|Homo sapiens nucleoporin 50kDa protein.
Length = 440
Score = 132 bits (320), Expect = 7e-31
Identities = 71/162 (43%), Positives = 101/162 (62%), Gaps = 6/162 (3%)
Query: 54 TDESSPSSDGSPLKFGAPSLTSTNTNNTEPANQEDEDVPPKVEFTPIAEENSVFDKRCKV 113
T +S P S P K ++ + ++E+ D PPKV T + EE++ + K+CK+
Sbjct: 279 TTQSKPVSSPFPTK-PLEGQAEGDSGECKGGDEEENDEPPKVVVTEVKEEDAFYSKKCKL 337
Query: 114 FVKKDGNFVDKGVGTLYIKKIENSDKHQLLVRANTALGNILLNLRLSAGIPTQRMGKNNV 173
F KKD F +KG+GTL++K N K QLLVRA+T LGNILLN+ + +P R GKNNV
Sbjct: 338 FYKKDNEFKEKGIGTLHLKPTAN-QKTQLLVRADTNLGNILLNVLIPPNMPCTRTGKNNV 396
Query: 174 MIICIPTP--DSK--PPPTSVLIRVKTPEEADEVLETLNKYK 211
+I+C+P P D K P ++LIRVKT E+ADE+ + L + K
Sbjct: 397 LIVCVPNPPIDEKNATMPVTMLIRVKTSEDADELHKILLEKK 438
>BC016055-1|AAH16055.1| 440|Homo sapiens NUP50 protein protein.
Length = 440
Score = 132 bits (320), Expect = 7e-31
Identities = 71/162 (43%), Positives = 101/162 (62%), Gaps = 6/162 (3%)
Query: 54 TDESSPSSDGSPLKFGAPSLTSTNTNNTEPANQEDEDVPPKVEFTPIAEENSVFDKRCKV 113
T +S P S P K ++ + ++E+ D PPKV T + EE++ + K+CK+
Sbjct: 279 TTQSKPVSSPFPTK-PLEGQAEGDSGECKGGDEEENDEPPKVVVTEVKEEDAFYSKKCKL 337
Query: 114 FVKKDGNFVDKGVGTLYIKKIENSDKHQLLVRANTALGNILLNLRLSAGIPTQRMGKNNV 173
F KKD F +KG+GTL++K N K QLLVRA+T LGNILLN+ + +P R GKNNV
Sbjct: 338 FYKKDNEFKEKGIGTLHLKPTAN-QKTQLLVRADTNLGNILLNVLIPPNMPCTRTGKNNV 396
Query: 174 MIICIPTP--DSK--PPPTSVLIRVKTPEEADEVLETLNKYK 211
+I+C+P P D K P ++LIRVKT E+ADE+ + L + K
Sbjct: 397 LIVCVPNPPIDEKNATMPVTMLIRVKTSEDADELHKILLEKK 438
>AL008718-1|CAI17944.1| 468|Homo sapiens nucleoporin 50kDa protein.
Length = 468
Score = 132 bits (320), Expect = 7e-31
Identities = 71/162 (43%), Positives = 101/162 (62%), Gaps = 6/162 (3%)
Query: 54 TDESSPSSDGSPLKFGAPSLTSTNTNNTEPANQEDEDVPPKVEFTPIAEENSVFDKRCKV 113
T +S P S P K ++ + ++E+ D PPKV T + EE++ + K+CK+
Sbjct: 307 TTQSKPVSSPFPTK-PLEGQAEGDSGECKGGDEEENDEPPKVVVTEVKEEDAFYSKKCKL 365
Query: 114 FVKKDGNFVDKGVGTLYIKKIENSDKHQLLVRANTALGNILLNLRLSAGIPTQRMGKNNV 173
F KKD F +KG+GTL++K N K QLLVRA+T LGNILLN+ + +P R GKNNV
Sbjct: 366 FYKKDNEFKEKGIGTLHLKPTAN-QKTQLLVRADTNLGNILLNVLIPPNMPCTRTGKNNV 424
Query: 174 MIICIPTP--DSK--PPPTSVLIRVKTPEEADEVLETLNKYK 211
+I+C+P P D K P ++LIRVKT E+ADE+ + L + K
Sbjct: 425 LIVCVPNPPIDEKNATMPVTMLIRVKTSEDADELHKILLEKK 466
Score = 50.4 bits (115), Expect = 5e-06
Identities = 24/46 (52%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Query: 4 KRQATTDLNHENWDQEDPEENKEMGTFKAAPKDILEKRVIKTAKRR 49
KR A +L NWDQED E +E+GTF A +++L+ R IK AKRR
Sbjct: 3 KRNAEKELTDRNWDQED--EAEEVGTFSMASEEVLKNRAIKKAKRR 46
>AF107840-1|AAD53401.1| 468|Homo sapiens nuclear pore-associated
protein protein.
Length = 468
Score = 132 bits (320), Expect = 7e-31
Identities = 71/162 (43%), Positives = 101/162 (62%), Gaps = 6/162 (3%)
Query: 54 TDESSPSSDGSPLKFGAPSLTSTNTNNTEPANQEDEDVPPKVEFTPIAEENSVFDKRCKV 113
T +S P S P K ++ + ++E+ D PPKV T + EE++ + K+CK+
Sbjct: 307 TTQSKPVSSPFPTK-PLEGQAEGDSGECKGGDEEENDEPPKVVVTEVKEEDAFYSKKCKL 365
Query: 114 FVKKDGNFVDKGVGTLYIKKIENSDKHQLLVRANTALGNILLNLRLSAGIPTQRMGKNNV 173
F KKD F +KG+GTL++K N K QLLVRA+T LGNILLN+ + +P R GKNNV
Sbjct: 366 FYKKDNEFKEKGIGTLHLKPTAN-QKTQLLVRADTNLGNILLNVLIPPNMPCTRTGKNNV 424
Query: 174 MIICIPTP--DSK--PPPTSVLIRVKTPEEADEVLETLNKYK 211
+I+C+P P D K P ++LIRVKT E+ADE+ + L + K
Sbjct: 425 LIVCVPNPPIDEKNATMPVTMLIRVKTSEDADELHKILLEKK 466
Score = 50.4 bits (115), Expect = 5e-06
Identities = 24/46 (52%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Query: 4 KRQATTDLNHENWDQEDPEENKEMGTFKAAPKDILEKRVIKTAKRR 49
KR A +L NWDQED E +E+GTF A +++L+ R IK AKRR
Sbjct: 3 KRNAEKELTDRNWDQED--EAEEVGTFSMASEEVLKNRAIKKAKRR 46
>AL389950-1|CAB97528.1| 178|Homo sapiens NPAP60L, nucleoporin
protein protein.
Length = 178
Score = 50.4 bits (115), Expect = 5e-06
Identities = 24/46 (52%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Query: 4 KRQATTDLNHENWDQEDPEENKEMGTFKAAPKDILEKRVIKTAKRR 49
KR A +L NWDQED E +E+GTF A +++L+ R IK AKRR
Sbjct: 3 KRNAEKELTDRNWDQED--EAEEVGTFSMASEEVLKNRAIKKAKRR 46
>AL389949-1|CAB97527.1| 179|Homo sapiens NPAP60L, nucleoporin
protein protein.
Length = 179
Score = 50.4 bits (115), Expect = 5e-06
Identities = 24/46 (52%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Query: 4 KRQATTDLNHENWDQEDPEENKEMGTFKAAPKDILEKRVIKTAKRR 49
KR A +L NWDQED E +E+GTF A +++L+ R IK AKRR
Sbjct: 3 KRNAEKELTDRNWDQED--EAEEVGTFSMASEEVLKNRAIKKAKRR 46
>L41840-1|AAC41758.1| 3224|Homo sapiens nucleoporin protein.
Length = 3224
Score = 43.6 bits (98), Expect = 5e-04
Identities = 43/151 (28%), Positives = 69/151 (45%), Gaps = 19/151 (12%)
Query: 68 FGAPSLTSTNTNNTEP---ANQEDED----------VPPKVEF-TPIAEENSVFDKRCKV 113
FG P+L + N N+ A+ +D+D +P K+E T +E F R K+
Sbjct: 1142 FGTPTLETANKNHETDGGSAHGDDDDDGPHFEPVVPLPDKIEVKTGEEDEEEFFCNRAKL 1201
Query: 114 FV--KKDGNFVDKGVGTLYIKKIENSDKHQLLVRANTALGNILLNLRLSAGIP-TQRMGK 170
F + + ++G+G + I + + S K +LL+R L I N +S + T G
Sbjct: 1202 FRFDVESKEWKERGIGNVKILRHKTSGKIRLLMRREQVL-KICANHYISPDMKLTPNAGS 1260
Query: 171 NNVMII-CIPTPDSKPPPTSVLIRVKTPEEA 200
+ + + D P P + IR KTPEEA
Sbjct: 1261 DRSFVWHALDYADELPKPEQLAIRFKTPEEA 1291
>D42063-1|BAA07662.1| 3224|Homo sapiens RanBP2 (Ran-binding protein 2)
protein.
Length = 3224
Score = 43.6 bits (98), Expect = 5e-04
Identities = 43/151 (28%), Positives = 69/151 (45%), Gaps = 19/151 (12%)
Query: 68 FGAPSLTSTNTNNTEP---ANQEDED----------VPPKVEF-TPIAEENSVFDKRCKV 113
FG P+L + N N+ A+ +D+D +P K+E T +E F R K+
Sbjct: 1142 FGTPTLETANKNHETDGGSAHGDDDDDGPHFEPVVPLPDKIEVKTGEEDEEEFFCNRAKL 1201
Query: 114 FV--KKDGNFVDKGVGTLYIKKIENSDKHQLLVRANTALGNILLNLRLSAGIP-TQRMGK 170
F + + ++G+G + I + + S K +LL+R L I N +S + T G
Sbjct: 1202 FRFDVESKEWKERGIGNVKILRHKTSGKIRLLMRREQVL-KICANHYISPDMKLTPNAGS 1260
Query: 171 NNVMII-CIPTPDSKPPPTSVLIRVKTPEEA 200
+ + + D P P + IR KTPEEA
Sbjct: 1261 DRSFVWHALDYADELPKPEQLAIRFKTPEEA 1291
>AC010095-2|AAY14984.1| 3224|Homo sapiens unknown protein.
Length = 3224
Score = 43.6 bits (98), Expect = 5e-04
Identities = 43/151 (28%), Positives = 69/151 (45%), Gaps = 19/151 (12%)
Query: 68 FGAPSLTSTNTNNTEP---ANQEDED----------VPPKVEF-TPIAEENSVFDKRCKV 113
FG P+L + N N+ A+ +D+D +P K+E T +E F R K+
Sbjct: 1142 FGTPTLETANKNHETDGGSAHGDDDDDGPHFEPVVPLPDKIEVKTGEEDEEEFFCNRAKL 1201
Query: 114 FV--KKDGNFVDKGVGTLYIKKIENSDKHQLLVRANTALGNILLNLRLSAGIP-TQRMGK 170
F + + ++G+G + I + + S K +LL+R L I N +S + T G
Sbjct: 1202 FRFDVESKEWKERGIGNVKILRHKTSGKIRLLMRREQVL-KICANHYISPDMKLTPNAGS 1260
Query: 171 NNVMII-CIPTPDSKPPPTSVLIRVKTPEEA 200
+ + + D P P + IR KTPEEA
Sbjct: 1261 DRSFVWHALDYADELPKPEQLAIRFKTPEEA 1291
>AB209483-1|BAD92720.1| 3138|Homo sapiens RAN binding protein 2
variant protein.
Length = 3138
Score = 43.6 bits (98), Expect = 5e-04
Identities = 43/151 (28%), Positives = 69/151 (45%), Gaps = 19/151 (12%)
Query: 68 FGAPSLTSTNTNNTEP---ANQEDED----------VPPKVEF-TPIAEENSVFDKRCKV 113
FG P+L + N N+ A+ +D+D +P K+E T +E F R K+
Sbjct: 1056 FGTPTLETANKNHETDGGSAHGDDDDDGPHFEPVVPLPDKIEVKTGEEDEEEFFCNRAKL 1115
Query: 114 FV--KKDGNFVDKGVGTLYIKKIENSDKHQLLVRANTALGNILLNLRLSAGIP-TQRMGK 170
F + + ++G+G + I + + S K +LL+R L I N +S + T G
Sbjct: 1116 FRFDVESKEWKERGIGNVKILRHKTSGKIRLLMRREQVL-KICANHYISPDMKLTPNAGS 1174
Query: 171 NNVMII-CIPTPDSKPPPTSVLIRVKTPEEA 200
+ + + D P P + IR KTPEEA
Sbjct: 1175 DRSFVWHALDYADELPKPEQLAIRFKTPEEA 1205
>U19240-1|AAA85837.1| 215|Homo sapiens Ran binding protein protein.
Length = 215
Score = 37.9 bits (84), Expect = 0.026
Identities = 33/115 (28%), Positives = 53/115 (46%), Gaps = 6/115 (5%)
Query: 91 VPPKVEF-TPIAEENSVFDKRCKVFV--KKDGNFVDKGVGTLYIKKIENSDKHQLLVRAN 147
+P K+E T +E F R K+F + + ++G+G + I + + S K +LL+R
Sbjct: 15 LPDKIEVKTGEEDEEEFFCNRAKLFRFDVESKEWKERGIGNVKILRHKTSGKIRLLMRRE 74
Query: 148 TALGNILLNLRLSAGIP-TQRMGKNNVMII-CIPTPDSKPPPTSVLIRVKTPEEA 200
L I N +S + T G + + + D P P + IR TPEEA
Sbjct: 75 QVL-KICANHYISPDMKLTPNAGSDRSFVWHALDYADELPKPEQLAIRFPTPEEA 128
>BC036895-1|AAH36895.1| 608|Homo sapiens AFF3 protein protein.
Length = 608
Score = 37.9 bits (84), Expect = 0.026
Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 2/88 (2%)
Query: 20 DPEENKEMGTFKAAPKDILEKRVIKTAKRRTTAPTDE--SSPSSDGSPLKFGAPSLTSTN 77
D EEN++ + A + + + V++ RT+ P+ + SS SS GS +S +
Sbjct: 375 DEEENEQQAAQRTALRALSDSAVVQQPNCRTSVPSSKGSSSSSSSGSSSSSSDSESSSGS 434
Query: 78 TNNTEPANQEDEDVPPKVEFTPIAEENS 105
+ TE ++ E E P +P AE S
Sbjct: 435 DSETESSSSESEGSKPPHFSSPEAEPAS 462
>AK092327-1|BAC03864.1| 781|Homo sapiens protein ( Homo sapiens
cDNA FLJ35008 fis, clone OCBBF2012191, highly similar to
LAF-4 PROTEIN. ).
Length = 781
Score = 37.9 bits (84), Expect = 0.026
Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 2/88 (2%)
Query: 20 DPEENKEMGTFKAAPKDILEKRVIKTAKRRTTAPTDE--SSPSSDGSPLKFGAPSLTSTN 77
D EEN++ + A + + + V++ RT+ P+ + SS SS GS +S +
Sbjct: 400 DEEENEQQAAQRTALRALSDSAVVQQPNCRTSVPSSKGSSSSSSSGSSSSSSDSESSSGS 459
Query: 78 TNNTEPANQEDEDVPPKVEFTPIAEENS 105
+ TE ++ E E P +P AE S
Sbjct: 460 DSETESSSSESEGSKPPHFSSPEAEPAS 487
>U34360-1|AAA98763.1| 1227|Homo sapiens LAF-4 protein.
Length = 1227
Score = 36.7 bits (81), Expect = 0.060
Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 2/88 (2%)
Query: 20 DPEENKEMGTFKAAPKDILEKRVIKTAKRRTTAPTDE--SSPSSDGSPLKFGAPSLTSTN 77
D EEN++ + A + + + V++ RT+ P+ + SS SS G+ +S +
Sbjct: 375 DEEENEQQAAQRTALRALSDSAVVQQPNCRTSVPSSKGSSSSSSSGTSSSSSDSESSSGS 434
Query: 78 TNNTEPANQEDEDVPPKVEFTPIAEENS 105
+ TE ++ E E P +P AE S
Sbjct: 435 DSETESSSSESEGSKPPHFSSPEAEPAS 462
>BC103660-1|AAI03661.1| 544|Homo sapiens RBM15 protein protein.
Length = 544
Score = 33.1 bits (72), Expect = 0.73
Identities = 16/53 (30%), Positives = 25/53 (47%)
Query: 47 KRRTTAPTDESSPSSDGSPLKFGAPSLTSTNTNNTEPANQEDEDVPPKVEFTP 99
K RTTAPT+ SP APS ++ ++ P+ ++D P +P
Sbjct: 305 KHRTTAPTEGKSPLKKEDRSDGSAPSTSTASSKLKSPSQKQDGGTAPVASASP 357
>BC103507-1|AAI03508.1| 969|Homo sapiens RBM15 protein protein.
Length = 969
Score = 33.1 bits (72), Expect = 0.73
Identities = 16/53 (30%), Positives = 25/53 (47%)
Query: 47 KRRTTAPTDESSPSSDGSPLKFGAPSLTSTNTNNTEPANQEDEDVPPKVEFTP 99
K RTTAPT+ SP APS ++ ++ P+ ++D P +P
Sbjct: 730 KHRTTAPTEGKSPLKKEDRSDGSAPSTSTASSKLKSPSQKQDGGTAPVASASP 782
>BC103493-1|AAI03494.1| 969|Homo sapiens RBM15 protein protein.
Length = 969
Score = 33.1 bits (72), Expect = 0.73
Identities = 16/53 (30%), Positives = 25/53 (47%)
Query: 47 KRRTTAPTDESSPSSDGSPLKFGAPSLTSTNTNNTEPANQEDEDVPPKVEFTP 99
K RTTAPT+ SP APS ++ ++ P+ ++D P +P
Sbjct: 730 KHRTTAPTEGKSPLKKEDRSDGSAPSTSTASSKLKSPSQKQDGGTAPVASASP 782
>BC098140-1|AAH98140.1| 969|Homo sapiens RBM15 protein protein.
Length = 969
Score = 33.1 bits (72), Expect = 0.73
Identities = 16/53 (30%), Positives = 25/53 (47%)
Query: 47 KRRTTAPTDESSPSSDGSPLKFGAPSLTSTNTNNTEPANQEDEDVPPKVEFTP 99
K RTTAPT+ SP APS ++ ++ P+ ++D P +P
Sbjct: 730 KHRTTAPTEGKSPLKKEDRSDGSAPSTSTASSKLKSPSQKQDGGTAPVASASP 782
>BC062316-1|AAH62316.1| 957|Homo sapiens RBM15 protein protein.
Length = 957
Score = 33.1 bits (72), Expect = 0.73
Identities = 16/53 (30%), Positives = 25/53 (47%)
Query: 47 KRRTTAPTDESSPSSDGSPLKFGAPSLTSTNTNNTEPANQEDEDVPPKVEFTP 99
K RTTAPT+ SP APS ++ ++ P+ ++D P +P
Sbjct: 710 KHRTTAPTEGKSPLKKEDRSDGSAPSTSTASSKLKSPSQKQDGGTAPVASASP 762
>BC047479-1|AAH47479.1| 959|Homo sapiens RBM15 protein protein.
Length = 959
Score = 33.1 bits (72), Expect = 0.73
Identities = 16/53 (30%), Positives = 25/53 (47%)
Query: 47 KRRTTAPTDESSPSSDGSPLKFGAPSLTSTNTNNTEPANQEDEDVPPKVEFTP 99
K RTTAPT+ SP APS ++ ++ P+ ++D P +P
Sbjct: 720 KHRTTAPTEGKSPLKKEDRSDGSAPSTSTASSKLKSPSQKQDGGTAPVASASP 772
>BC006397-1|AAH06397.2| 957|Homo sapiens RBM15 protein protein.
Length = 957
Score = 33.1 bits (72), Expect = 0.73
Identities = 16/53 (30%), Positives = 25/53 (47%)
Query: 47 KRRTTAPTDESSPSSDGSPLKFGAPSLTSTNTNNTEPANQEDEDVPPKVEFTP 99
K RTTAPT+ SP APS ++ ++ P+ ++D P +P
Sbjct: 710 KHRTTAPTEGKSPLKKEDRSDGSAPSTSTASSKLKSPSQKQDGGTAPVASASP 762
>AL355488-1|CAI19077.1| 977|Homo sapiens RNA binding motif protein
15 protein.
Length = 977
Score = 33.1 bits (72), Expect = 0.73
Identities = 16/53 (30%), Positives = 25/53 (47%)
Query: 47 KRRTTAPTDESSPSSDGSPLKFGAPSLTSTNTNNTEPANQEDEDVPPKVEFTP 99
K RTTAPT+ SP APS ++ ++ P+ ++D P +P
Sbjct: 730 KHRTTAPTEGKSPLKKEDRSDGSAPSTSTASSKLKSPSQKQDGGTAPVASASP 782
>AK025596-1|BAB15185.1| 532|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21943 fis, clone HEP04547. ).
Length = 532
Score = 33.1 bits (72), Expect = 0.73
Identities = 16/53 (30%), Positives = 25/53 (47%)
Query: 47 KRRTTAPTDESSPSSDGSPLKFGAPSLTSTNTNNTEPANQEDEDVPPKVEFTP 99
K RTTAPT+ SP APS ++ ++ P+ ++D P +P
Sbjct: 305 KHRTTAPTEGKSPLKKEDRSDGSAPSTSTASSKLKSPSQKQDGGTAPVASASP 357
>AK022541-1|BAB14088.1| 925|Homo sapiens protein ( Homo sapiens
cDNA FLJ12479 fis, clone NT2RM1001059, weakly similar to
NUCLEAR POLYADENYLATED RNA-BINDING PROTEIN NAB4. ).
Length = 925
Score = 33.1 bits (72), Expect = 0.73
Identities = 16/53 (30%), Positives = 25/53 (47%)
Query: 47 KRRTTAPTDESSPSSDGSPLKFGAPSLTSTNTNNTEPANQEDEDVPPKVEFTP 99
K RTTAPT+ SP APS ++ ++ P+ ++D P +P
Sbjct: 686 KHRTTAPTEGKSPLKKEDRSDGSAPSTSTASSKLKSPSQKQDGGTAPVASASP 738
>AJ303090-1|CAC38829.1| 1883|Homo sapiens OTT-MAL protein.
Length = 1883
Score = 33.1 bits (72), Expect = 0.73
Identities = 16/53 (30%), Positives = 25/53 (47%)
Query: 47 KRRTTAPTDESSPSSDGSPLKFGAPSLTSTNTNNTEPANQEDEDVPPKVEFTP 99
K RTTAPT+ SP APS ++ ++ P+ ++D P +P
Sbjct: 730 KHRTTAPTEGKSPLKKEDRSDGSAPSTSTASSKLKSPSQKQDGGTAPVASASP 782
>AJ303089-1|CAC38828.1| 1905|Homo sapiens OTT-MAL protein.
Length = 1905
Score = 33.1 bits (72), Expect = 0.73
Identities = 16/53 (30%), Positives = 25/53 (47%)
Query: 47 KRRTTAPTDESSPSSDGSPLKFGAPSLTSTNTNNTEPANQEDEDVPPKVEFTP 99
K RTTAPT+ SP APS ++ ++ P+ ++D P +P
Sbjct: 730 KHRTTAPTEGKSPLKKEDRSDGSAPSTSTASSKLKSPSQKQDGGTAPVASASP 782
>AJ297259-2|CAC38862.1| 969|Homo sapiens one twenty two protein
protein.
Length = 969
Score = 33.1 bits (72), Expect = 0.73
Identities = 16/53 (30%), Positives = 25/53 (47%)
Query: 47 KRRTTAPTDESSPSSDGSPLKFGAPSLTSTNTNNTEPANQEDEDVPPKVEFTP 99
K RTTAPT+ SP APS ++ ++ P+ ++D P +P
Sbjct: 730 KHRTTAPTEGKSPLKKEDRSDGSAPSTSTASSKLKSPSQKQDGGTAPVASASP 782
>AJ297259-1|CAC38861.1| 957|Homo sapiens one twenty two protein
protein.
Length = 957
Score = 33.1 bits (72), Expect = 0.73
Identities = 16/53 (30%), Positives = 25/53 (47%)
Query: 47 KRRTTAPTDESSPSSDGSPLKFGAPSLTSTNTNNTEPANQEDEDVPPKVEFTP 99
K RTTAPT+ SP APS ++ ++ P+ ++D P +P
Sbjct: 730 KHRTTAPTEGKSPLKKEDRSDGSAPSTSTASSKLKSPSQKQDGGTAPVASASP 782
>AF368064-1|AAK54724.1| 957|Homo sapiens putative RNA-binding motif
protein 15 long form protein.
Length = 957
Score = 33.1 bits (72), Expect = 0.73
Identities = 16/53 (30%), Positives = 25/53 (47%)
Query: 47 KRRTTAPTDESSPSSDGSPLKFGAPSLTSTNTNNTEPANQEDEDVPPKVEFTP 99
K RTTAPT+ SP APS ++ ++ P+ ++D P +P
Sbjct: 730 KHRTTAPTEGKSPLKKEDRSDGSAPSTSTASSKLKSPSQKQDGGTAPVASASP 782
>AF368063-1|AAK54723.1| 977|Homo sapiens putative RNA-binding motif
protein 15 short form plus alternative exon protein.
Length = 977
Score = 33.1 bits (72), Expect = 0.73
Identities = 16/53 (30%), Positives = 25/53 (47%)
Query: 47 KRRTTAPTDESSPSSDGSPLKFGAPSLTSTNTNNTEPANQEDEDVPPKVEFTP 99
K RTTAPT+ SP APS ++ ++ P+ ++D P +P
Sbjct: 730 KHRTTAPTEGKSPLKKEDRSDGSAPSTSTASSKLKSPSQKQDGGTAPVASASP 782
>AF368062-1|AAK54722.1| 969|Homo sapiens putative RNA-binding motif
protein 15 short form protein.
Length = 969
Score = 33.1 bits (72), Expect = 0.73
Identities = 16/53 (30%), Positives = 25/53 (47%)
Query: 47 KRRTTAPTDESSPSSDGSPLKFGAPSLTSTNTNNTEPANQEDEDVPPKVEFTP 99
K RTTAPT+ SP APS ++ ++ P+ ++D P +P
Sbjct: 730 KHRTTAPTEGKSPLKKEDRSDGSAPSTSTASSKLKSPSQKQDGGTAPVASASP 782
>AB209680-1|BAD92917.1| 316|Homo sapiens RNA binding motif protein
15 variant protein.
Length = 316
Score = 33.1 bits (72), Expect = 0.73
Identities = 16/53 (30%), Positives = 25/53 (47%)
Query: 47 KRRTTAPTDESSPSSDGSPLKFGAPSLTSTNTNNTEPANQEDEDVPPKVEFTP 99
K RTTAPT+ SP APS ++ ++ P+ ++D P +P
Sbjct: 89 KHRTTAPTEGKSPLKKEDRSDGSAPSTSTASSKLKSPSQKQDGGTAPVASASP 141
>BC130418-1|AAI30419.1| 1153|Homo sapiens ARID4B protein protein.
Length = 1153
Score = 32.7 bits (71), Expect = 0.97
Identities = 24/97 (24%), Positives = 42/97 (43%), Gaps = 1/97 (1%)
Query: 14 ENWDQEDPEENKEMGTFKAAPKDILEKRVIKTAKRRTTAPTDESSPSSDGSPLKFGAPSL 73
E+ D E+ E K+ K D K IK KRR T+E + + A +
Sbjct: 791 EDTDYEEDEVTKKRKDVKKDTTDKSSKPQIKRGKRRY-CNTEECLKTGSPGKKEEKAKNK 849
Query: 74 TSTNTNNTEPANQEDEDVPPKVEFTPIAEENSVFDKR 110
S N+ ++ ++++ K + TP + N + +KR
Sbjct: 850 ESLCMENSSNSSSDEDEEETKAKMTPTKKYNGLEEKR 886
>BC050132-1|AAH50132.1| 486|Homo sapiens thioredoxin domain
containing 2 (spermatozoa) protein.
Length = 486
Score = 32.7 bits (71), Expect = 0.97
Identities = 23/102 (22%), Positives = 42/102 (41%), Gaps = 6/102 (5%)
Query: 21 PEENKEMGTFKAAPKDILE--KRVIKTAKRRTTAPTDESSPSSDGSPLKFGAPSLTSTNT 78
P + KE G AP++ ++ K + + P + P S P++ P L +
Sbjct: 104 PSQPKE-GDIPKAPEETIQSKKEDLPKSSEEAIQPKEGDIPKSSAKPIQ---PKLGNIAK 159
Query: 79 NNTEPANQEDEDVPPKVEFTPIAEENSVFDKRCKVFVKKDGN 120
+ +P+ ++ D+P E T +E + K K GN
Sbjct: 160 TSVKPSQPKESDIPKSPEETIQPKEGDIPKSSAKPIQPKLGN 201
>AL391994-7|CAI13752.1| 1071|Homo sapiens AT rich interactive domain
4B (RBP1-like) protein.
Length = 1071
Score = 32.7 bits (71), Expect = 0.97
Identities = 24/97 (24%), Positives = 42/97 (43%), Gaps = 1/97 (1%)
Query: 14 ENWDQEDPEENKEMGTFKAAPKDILEKRVIKTAKRRTTAPTDESSPSSDGSPLKFGAPSL 73
E+ D E+ E K+ K D K IK KRR T+E + + A +
Sbjct: 705 EDTDYEEDEVTKKRKDVKKDTTDKSSKPQIKRGKRRY-CNTEECLKTGSPGKKEEKAKNK 763
Query: 74 TSTNTNNTEPANQEDEDVPPKVEFTPIAEENSVFDKR 110
S N+ ++ ++++ K + TP + N + +KR
Sbjct: 764 ESLCMENSSNSSSDEDEEETKAKMTPTKKYNGLEEKR 800
>AL391994-6|CAI13751.1| 1226|Homo sapiens AT rich interactive domain
4B (RBP1-like) protein.
Length = 1226
Score = 32.7 bits (71), Expect = 0.97
Identities = 24/97 (24%), Positives = 42/97 (43%), Gaps = 1/97 (1%)
Query: 14 ENWDQEDPEENKEMGTFKAAPKDILEKRVIKTAKRRTTAPTDESSPSSDGSPLKFGAPSL 73
E+ D E+ E K+ K D K IK KRR T+E + + A +
Sbjct: 705 EDTDYEEDEVTKKRKDVKKDTTDKSSKPQIKRGKRRY-CNTEECLKTGSPGKKEEKAKNK 763
Query: 74 TSTNTNNTEPANQEDEDVPPKVEFTPIAEENSVFDKR 110
S N+ ++ ++++ K + TP + N + +KR
Sbjct: 764 ESLCMENSSNSSSDEDEEETKAKMTPTKKYNGLEEKR 800
>AL391994-2|CAI13747.1| 1310|Homo sapiens AT rich interactive domain
4B (RBP1-like) protein.
Length = 1310
Score = 32.7 bits (71), Expect = 0.97
Identities = 24/97 (24%), Positives = 42/97 (43%), Gaps = 1/97 (1%)
Query: 14 ENWDQEDPEENKEMGTFKAAPKDILEKRVIKTAKRRTTAPTDESSPSSDGSPLKFGAPSL 73
E+ D E+ E K+ K D K IK KRR T+E + + A +
Sbjct: 789 EDTDYEEDEVTKKRKDVKKDTTDKSSKPQIKRGKRRY-CNTEECLKTGSPGKKEEKAKNK 847
Query: 74 TSTNTNNTEPANQEDEDVPPKVEFTPIAEENSVFDKR 110
S N+ ++ ++++ K + TP + N + +KR
Sbjct: 848 ESLCMENSSNSSSDEDEEETKAKMTPTKKYNGLEEKR 884
>AL391994-1|CAI13746.1| 927|Homo sapiens AT rich interactive domain
4B (RBP1-like) protein.
Length = 927
Score = 32.7 bits (71), Expect = 0.97
Identities = 24/97 (24%), Positives = 42/97 (43%), Gaps = 1/97 (1%)
Query: 14 ENWDQEDPEENKEMGTFKAAPKDILEKRVIKTAKRRTTAPTDESSPSSDGSPLKFGAPSL 73
E+ D E+ E K+ K D K IK KRR T+E + + A +
Sbjct: 596 EDTDYEEDEVTKKRKDVKKDTTDKSSKPQIKRGKRRY-CNTEECLKTGSPGKKEEKAKNK 654
Query: 74 TSTNTNNTEPANQEDEDVPPKVEFTPIAEENSVFDKR 110
S N+ ++ ++++ K + TP + N + +KR
Sbjct: 655 ESLCMENSSNSSSDEDEEETKAKMTPTKKYNGLEEKR 691
>AL133418-7|CAI22963.1| 1071|Homo sapiens AT rich interactive domain
4B (RBP1-like) protein.
Length = 1071
Score = 32.7 bits (71), Expect = 0.97
Identities = 24/97 (24%), Positives = 42/97 (43%), Gaps = 1/97 (1%)
Query: 14 ENWDQEDPEENKEMGTFKAAPKDILEKRVIKTAKRRTTAPTDESSPSSDGSPLKFGAPSL 73
E+ D E+ E K+ K D K IK KRR T+E + + A +
Sbjct: 705 EDTDYEEDEVTKKRKDVKKDTTDKSSKPQIKRGKRRY-CNTEECLKTGSPGKKEEKAKNK 763
Query: 74 TSTNTNNTEPANQEDEDVPPKVEFTPIAEENSVFDKR 110
S N+ ++ ++++ K + TP + N + +KR
Sbjct: 764 ESLCMENSSNSSSDEDEEETKAKMTPTKKYNGLEEKR 800
>AL133418-6|CAI22962.1| 1226|Homo sapiens AT rich interactive domain
4B (RBP1-like) protein.
Length = 1226
Score = 32.7 bits (71), Expect = 0.97
Identities = 24/97 (24%), Positives = 42/97 (43%), Gaps = 1/97 (1%)
Query: 14 ENWDQEDPEENKEMGTFKAAPKDILEKRVIKTAKRRTTAPTDESSPSSDGSPLKFGAPSL 73
E+ D E+ E K+ K D K IK KRR T+E + + A +
Sbjct: 705 EDTDYEEDEVTKKRKDVKKDTTDKSSKPQIKRGKRRY-CNTEECLKTGSPGKKEEKAKNK 763
Query: 74 TSTNTNNTEPANQEDEDVPPKVEFTPIAEENSVFDKR 110
S N+ ++ ++++ K + TP + N + +KR
Sbjct: 764 ESLCMENSSNSSSDEDEEETKAKMTPTKKYNGLEEKR 800
>AL133418-5|CAI22961.1| 1310|Homo sapiens AT rich interactive domain
4B (RBP1-like) protein.
Length = 1310
Score = 32.7 bits (71), Expect = 0.97
Identities = 24/97 (24%), Positives = 42/97 (43%), Gaps = 1/97 (1%)
Query: 14 ENWDQEDPEENKEMGTFKAAPKDILEKRVIKTAKRRTTAPTDESSPSSDGSPLKFGAPSL 73
E+ D E+ E K+ K D K IK KRR T+E + + A +
Sbjct: 789 EDTDYEEDEVTKKRKDVKKDTTDKSSKPQIKRGKRRY-CNTEECLKTGSPGKKEEKAKNK 847
Query: 74 TSTNTNNTEPANQEDEDVPPKVEFTPIAEENSVFDKR 110
S N+ ++ ++++ K + TP + N + +KR
Sbjct: 848 ESLCMENSSNSSSDEDEEETKAKMTPTKKYNGLEEKR 884
>AL133418-1|CAI22958.1| 927|Homo sapiens AT rich interactive domain
4B (RBP1-like) protein.
Length = 927
Score = 32.7 bits (71), Expect = 0.97
Identities = 24/97 (24%), Positives = 42/97 (43%), Gaps = 1/97 (1%)
Query: 14 ENWDQEDPEENKEMGTFKAAPKDILEKRVIKTAKRRTTAPTDESSPSSDGSPLKFGAPSL 73
E+ D E+ E K+ K D K IK KRR T+E + + A +
Sbjct: 596 EDTDYEEDEVTKKRKDVKKDTTDKSSKPQIKRGKRRY-CNTEECLKTGSPGKKEEKAKNK 654
Query: 74 TSTNTNNTEPANQEDEDVPPKVEFTPIAEENSVFDKR 110
S N+ ++ ++++ K + TP + N + +KR
Sbjct: 655 ESLCMENSSNSSSDEDEEETKAKMTPTKKYNGLEEKR 691
>AK097656-1|BAC05133.1| 553|Homo sapiens protein ( Homo sapiens
cDNA FLJ40337 fis, clone TESTI2032044, moderately
similar to THIOREDOXIN. ).
Length = 553
Score = 32.7 bits (71), Expect = 0.97
Identities = 23/102 (22%), Positives = 42/102 (41%), Gaps = 6/102 (5%)
Query: 21 PEENKEMGTFKAAPKDILE--KRVIKTAKRRTTAPTDESSPSSDGSPLKFGAPSLTSTNT 78
P + KE G AP++ ++ K + + P + P S P++ P L +
Sbjct: 171 PSQPKE-GDIPKAPEETIQSKKEDLPKSSEEAIQPKEGDIPKSSAKPIQ---PKLGNIAK 226
Query: 79 NNTEPANQEDEDVPPKVEFTPIAEENSVFDKRCKVFVKKDGN 120
+ +P+ ++ D+P E T +E + K K GN
Sbjct: 227 TSVKPSQPKESDIPKSPEETIQPKEGDIPKSSAKPIQPKLGN 268
>AF227899-1|AAF36964.1| 873|Homo sapiens breast
carcinoma-associated antigen isoform I protein.
Length = 873
Score = 32.7 bits (71), Expect = 0.97
Identities = 24/97 (24%), Positives = 42/97 (43%), Gaps = 1/97 (1%)
Query: 14 ENWDQEDPEENKEMGTFKAAPKDILEKRVIKTAKRRTTAPTDESSPSSDGSPLKFGAPSL 73
E+ D E+ E K+ K D K IK KRR T+E + + A +
Sbjct: 352 EDTDYEEDEVTKKRKDVKKDTTDKSSKPQIKRGKRRY-CNTEECLKTGSPGKKEEKAKNK 410
Query: 74 TSTNTNNTEPANQEDEDVPPKVEFTPIAEENSVFDKR 110
S N+ ++ ++++ K + TP + N + +KR
Sbjct: 411 ESLCMENSSNSSSDEDEEETKAKMTPTKKYNGLEEKR 447
>AF214114-1|AAF28341.2| 1226|Homo sapiens retinoblastoma-binding
protein 1-like 1 protein.
Length = 1226
Score = 32.7 bits (71), Expect = 0.97
Identities = 24/97 (24%), Positives = 42/97 (43%), Gaps = 1/97 (1%)
Query: 14 ENWDQEDPEENKEMGTFKAAPKDILEKRVIKTAKRRTTAPTDESSPSSDGSPLKFGAPSL 73
E+ D E+ E K+ K D K IK KRR T+E + + A +
Sbjct: 705 EDTDYEEDEVTKKRKDVKKDTTDKSSKPQIKRGKRRY-CNTEECLKTGSPGKKEEKAKNK 763
Query: 74 TSTNTNNTEPANQEDEDVPPKVEFTPIAEENSVFDKR 110
S N+ ++ ++++ K + TP + N + +KR
Sbjct: 764 ESLCMENSSNSSSDEDEEETKAKMTPTKKYNGLEEKR 800
>AF208045-1|AAF23433.3| 1213|Homo sapiens breast cancer-associated
antigen BRCAA1 protein.
Length = 1213
Score = 32.7 bits (71), Expect = 0.97
Identities = 24/97 (24%), Positives = 42/97 (43%), Gaps = 1/97 (1%)
Query: 14 ENWDQEDPEENKEMGTFKAAPKDILEKRVIKTAKRRTTAPTDESSPSSDGSPLKFGAPSL 73
E+ D E+ E K+ K D K IK KRR T+E + + A +
Sbjct: 710 EDTDYEEDEVTKKRKDVKKDTTDKSSKPQIKRGKRRY-CNTEECLKTGSPGKKEEKAKNK 768
Query: 74 TSTNTNNTEPANQEDEDVPPKVEFTPIAEENSVFDKR 110
S N+ ++ ++++ K + TP + N + +KR
Sbjct: 769 ESLCMENSSNSSSDEDEEETKAKMTPTKKYNGLEEKR 805
>AF080095-1|AAK94950.1| 486|Homo sapiens sperm-specific thioredoxin
protein.
Length = 486
Score = 32.7 bits (71), Expect = 0.97
Identities = 23/102 (22%), Positives = 42/102 (41%), Gaps = 6/102 (5%)
Query: 21 PEENKEMGTFKAAPKDILE--KRVIKTAKRRTTAPTDESSPSSDGSPLKFGAPSLTSTNT 78
P + KE G AP++ ++ K + + P + P S P++ P L +
Sbjct: 104 PSQPKE-GDIPKAPEETIQSKKEDLPKSSEEAIQPKEGDIPKSSAKPIQ---PKLGNIAK 159
Query: 79 NNTEPANQEDEDVPPKVEFTPIAEENSVFDKRCKVFVKKDGN 120
+ +P+ ++ D+P E T +E + K K GN
Sbjct: 160 TSVKPSQPKESDIPKSPEETIQPKEGDIPKSSAKPIQPKLGN 201
>AB210032-1|BAE06114.1| 1325|Homo sapiens ARID4B variant protein
protein.
Length = 1325
Score = 32.7 bits (71), Expect = 0.97
Identities = 24/97 (24%), Positives = 42/97 (43%), Gaps = 1/97 (1%)
Query: 14 ENWDQEDPEENKEMGTFKAAPKDILEKRVIKTAKRRTTAPTDESSPSSDGSPLKFGAPSL 73
E+ D E+ E K+ K D K IK KRR T+E + + A +
Sbjct: 804 EDTDYEEDEVTKKRKDVKKDTTDKSSKPQIKRGKRRY-CNTEECLKTGSPGKKEEKAKNK 862
Query: 74 TSTNTNNTEPANQEDEDVPPKVEFTPIAEENSVFDKR 110
S N+ ++ ++++ K + TP + N + +KR
Sbjct: 863 ESLCMENSSNSSSDEDEEETKAKMTPTKKYNGLEEKR 899
>AB030181-1|BAA89794.1| 803|Homo sapiens RBP1-like protein protein.
Length = 803
Score = 32.7 bits (71), Expect = 0.97
Identities = 24/97 (24%), Positives = 42/97 (43%), Gaps = 1/97 (1%)
Query: 14 ENWDQEDPEENKEMGTFKAAPKDILEKRVIKTAKRRTTAPTDESSPSSDGSPLKFGAPSL 73
E+ D E+ E K+ K D K IK KRR T+E + + A +
Sbjct: 472 EDTDYEEDEVTKKRKDVKKDTTDKSSKPQIKRGKRRY-CNTEECLKTGSPGKKEEKAKNK 530
Query: 74 TSTNTNNTEPANQEDEDVPPKVEFTPIAEENSVFDKR 110
S N+ ++ ++++ K + TP + N + +KR
Sbjct: 531 ESLCMENSSNSSSDEDEEETKAKMTPTKKYNGLEEKR 567
>AJ606308-1|CAE54436.1| 4262|Homo sapiens secreted mucin MUC17
protein.
Length = 4262
Score = 32.3 bits (70), Expect = 1.3
Identities = 22/67 (32%), Positives = 29/67 (43%), Gaps = 2/67 (2%)
Query: 21 PEENKEMGTFKAAPKDILEKRVIKTAKRRTTAPTDESSPSSDGSPLKFGAPSLTSTNTNN 80
P + E T A P D + T+ T++PT S S L G LTST ++
Sbjct: 1760 PVLSSEASTLSATPIDT--STPVTTSTEATSSPTTAEGTSIPTSTLSEGMTPLTSTPVSH 1817
Query: 81 TEPANQE 87
T AN E
Sbjct: 1818 TLVANSE 1824
Score = 31.5 bits (68), Expect = 2.2
Identities = 22/71 (30%), Positives = 29/71 (40%), Gaps = 2/71 (2%)
Query: 17 DQEDPEENKEMGTFKAAPKDILEKRVIKTAKRRTTAPTDESSPSSDGSPLKFGAPSLTST 76
D P + E T A P D + T+ T++PT S S G LTST
Sbjct: 931 DSTTPVVSSEARTLSATPVDT--STPVTTSTEATSSPTTAEGTSIPTSTPSEGTTPLTST 988
Query: 77 NTNNTEPANQE 87
++T AN E
Sbjct: 989 PVSHTLVANSE 999
Score = 30.7 bits (66), Expect = 3.9
Identities = 21/67 (31%), Positives = 27/67 (40%), Gaps = 2/67 (2%)
Query: 21 PEENKEMGTFKAAPKDILEKRVIKTAKRRTTAPTDESSPSSDGSPLKFGAPSLTSTNTNN 80
P E T A P D + T+ T++PT S S L G LTS ++
Sbjct: 2231 PVVTSEASTLSATPVDT--STPVTTSTEATSSPTTAEGTSIPTSTLSEGTTPLTSIPVSH 2288
Query: 81 TEPANQE 87
T AN E
Sbjct: 2289 TLVANSE 2295
>AJ606307-1|CAE54435.1| 4493|Homo sapiens membrane mucin MUC17
protein.
Length = 4493
Score = 32.3 bits (70), Expect = 1.3
Identities = 22/67 (32%), Positives = 29/67 (43%), Gaps = 2/67 (2%)
Query: 21 PEENKEMGTFKAAPKDILEKRVIKTAKRRTTAPTDESSPSSDGSPLKFGAPSLTSTNTNN 80
P + E T A P D + T+ T++PT S S L G LTST ++
Sbjct: 1760 PVLSSEASTLSATPIDT--STPVTTSTEATSSPTTAEGTSIPTSTLSEGMTPLTSTPVSH 1817
Query: 81 TEPANQE 87
T AN E
Sbjct: 1818 TLVANSE 1824
Score = 31.5 bits (68), Expect = 2.2
Identities = 22/71 (30%), Positives = 29/71 (40%), Gaps = 2/71 (2%)
Query: 17 DQEDPEENKEMGTFKAAPKDILEKRVIKTAKRRTTAPTDESSPSSDGSPLKFGAPSLTST 76
D P + E T A P D + T+ T++PT S S G LTST
Sbjct: 931 DSTTPVVSSEARTLSATPVDT--STPVTTSTEATSSPTTAEGTSIPTSTPSEGTTPLTST 988
Query: 77 NTNNTEPANQE 87
++T AN E
Sbjct: 989 PVSHTLVANSE 999
Score = 30.7 bits (66), Expect = 3.9
Identities = 21/67 (31%), Positives = 27/67 (40%), Gaps = 2/67 (2%)
Query: 21 PEENKEMGTFKAAPKDILEKRVIKTAKRRTTAPTDESSPSSDGSPLKFGAPSLTSTNTNN 80
P E T A P D + T+ T++PT S S L G LTS ++
Sbjct: 2231 PVVTSEASTLSATPVDT--STPVTTSTEATSSPTTAEGTSIPTSTLSEGTTPLTSIPVSH 2288
Query: 81 TEPANQE 87
T AN E
Sbjct: 2289 TLVANSE 2295
>U20979-1|AAA76736.1| 938|Homo sapiens chromatin assembly factor-I
p150 subunit protein.
Length = 938
Score = 31.1 bits (67), Expect = 3.0
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Query: 69 GAPSLTSTNTNNTEPANQEDEDVPPKVEFTPIAEENSVFDKR 110
G+P ST +T P ED +P K + ENSV++KR
Sbjct: 753 GSPRTPSTTYLHT-PTPSEDAAIPSKSRLKRLISENSVYEKR 793
>U05237-1|AAA97522.1| 810|Homo sapiens FAC1 protein.
Length = 810
Score = 30.7 bits (66), Expect = 3.9
Identities = 21/79 (26%), Positives = 41/79 (51%), Gaps = 4/79 (5%)
Query: 17 DQEDPEENKEMGTFKAAPKDILEKRVIKTAK---RRTTAPTDESSPSSDGSPLKFGAPSL 73
D + P+++ E G + P ++ +K +A T A ++E+SPS SP+ + +
Sbjct: 468 DDKTPDDDPEQGKSEE-PTEVGDKGNSVSANLGDNTTNATSEETSPSEGRSPVGCLSETP 526
Query: 74 TSTNTNNTEPANQEDEDVP 92
S+N + A++ +DVP
Sbjct: 527 DSSNMAEKKVASELPQDVP 545
>BC067093-1|AAH67093.1| 956|Homo sapiens chromatin assembly factor
1, subunit A (p150) protein.
Length = 956
Score = 30.7 bits (66), Expect = 3.9
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Query: 69 GAPSLTSTNTNNTEPANQEDEDVPPKVEFTPIAEENSVFDKR 110
G+P ST +T P ED +P K + ENSV++KR
Sbjct: 771 GSPRSPSTTYLHT-PTPSEDAAIPSKSRLKRLISENSVYEKR 811
>AY282495-1|AAP22284.1| 2764|Homo sapiens bromodomain PHD finger
transcription factor protein.
Length = 2764
Score = 30.7 bits (66), Expect = 3.9
Identities = 21/79 (26%), Positives = 41/79 (51%), Gaps = 4/79 (5%)
Query: 17 DQEDPEENKEMGTFKAAPKDILEKRVIKTAK---RRTTAPTDESSPSSDGSPLKFGAPSL 73
D + P+++ E G + P ++ +K +A T A ++E+SPS SP+ + +
Sbjct: 468 DDKTPDDDPEQGKSEE-PTEVGDKGNSVSANLGDNTTNATSEETSPSEGRSPVGCLSETP 526
Query: 74 TSTNTNNTEPANQEDEDVP 92
S+N + A++ +DVP
Sbjct: 527 DSSNMAEKKVASELPQDVP 545
>AF190465-2|AAF04291.1| 938|Homo sapiens chromatin assembly
factor-I p150 subunit protein.
Length = 938
Score = 30.7 bits (66), Expect = 3.9
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Query: 69 GAPSLTSTNTNNTEPANQEDEDVPPKVEFTPIAEENSVFDKR 110
G+P ST +T P ED +P K + ENSV++KR
Sbjct: 753 GSPRSPSTTYLHT-PTPSEDAAIPSKSRLKRLISENSVYEKR 793
>Z83844-3|CAI20370.2| 701|Homo sapiens SH3-domain binding protein 1
protein.
Length = 701
Score = 29.9 bits (64), Expect = 6.8
Identities = 19/73 (26%), Positives = 29/73 (39%), Gaps = 1/73 (1%)
Query: 28 GTFKAAP-KDILEKRVIKTAKRRTTAPTDESSPSSDGSPLKFGAPSLTSTNTNNTEPANQ 86
G F A +D + R+ T PT ++P+ +P AP+L S T +
Sbjct: 479 GLFSAVTLQDTVSDRLASEELPSTAVPTPATTPAPAPAPAPAPAPALASAATKERTESEV 538
Query: 87 EDEDVPPKVEFTP 99
PKV +P
Sbjct: 539 PPRPASPKVTRSP 551
>X54162-1|CAA38101.1| 572|Homo sapiens 64 Kd autoantigen protein.
Length = 572
Score = 29.9 bits (64), Expect = 6.8
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 5/73 (6%)
Query: 5 RQATTDLNHENWD---QEDPEENKEMGTFKAAPKDILEKRVIKTAKRRTTAPTDESSP-- 59
R T+L N D Q+ +E ++ K KD+LE + + P+ + SP
Sbjct: 432 RMTVTNLLSRNMDKQRQKRLQEQRQAQEAKGEKKDLLEVPKAGAVAKGSPKPSPQPSPKP 491
Query: 60 SSDGSPLKFGAPS 72
S SP K GAP+
Sbjct: 492 SPKNSPKKGGAPA 504
>CR456576-1|CAG30462.1| 701|Homo sapiens SH3BP1 protein.
Length = 701
Score = 29.9 bits (64), Expect = 6.8
Identities = 19/73 (26%), Positives = 29/73 (39%), Gaps = 1/73 (1%)
Query: 28 GTFKAAP-KDILEKRVIKTAKRRTTAPTDESSPSSDGSPLKFGAPSLTSTNTNNTEPANQ 86
G F A +D + R+ T PT ++P+ +P AP+L S T +
Sbjct: 479 GLFSAVTLQDTVSDRLASEELPSTAVPTPATTPAPAPAPAPAPAPALASAATKERTESEV 538
Query: 87 EDEDVPPKVEFTP 99
PKV +P
Sbjct: 539 PPRPASPKVTRSP 551
>BC080187-1|AAH80187.1| 600|Homo sapiens leiomodin 1 (smooth
muscle) protein.
Length = 600
Score = 29.9 bits (64), Expect = 6.8
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 5/73 (6%)
Query: 5 RQATTDLNHENWD---QEDPEENKEMGTFKAAPKDILEKRVIKTAKRRTTAPTDESSP-- 59
R T+L N D Q+ +E ++ K KD+LE + + P+ + SP
Sbjct: 460 RMTVTNLLSRNMDKQRQKRLQEQRQAQEAKGEKKDLLEVPKAGAVAKGSPKPSPQPSPKP 519
Query: 60 SSDGSPLKFGAPS 72
S SP K GAP+
Sbjct: 520 SPKNSPKKGGAPA 532
>BC008282-1|AAH08282.1| 621|Homo sapiens SH3BP1 protein protein.
Length = 621
Score = 29.9 bits (64), Expect = 6.8
Identities = 19/73 (26%), Positives = 29/73 (39%), Gaps = 1/73 (1%)
Query: 28 GTFKAAP-KDILEKRVIKTAKRRTTAPTDESSPSSDGSPLKFGAPSLTSTNTNNTEPANQ 86
G F A +D + R+ T PT ++P+ +P AP+L S T +
Sbjct: 399 GLFSAVTLQDTVSDRLASEELPSTAVPTPATTPAPAPAPAPAPAPALASAATKERTESEV 458
Query: 87 EDEDVPPKVEFTP 99
PKV +P
Sbjct: 459 PPRPASPKVTRSP 471
>AY364241-1|AAQ76800.1| 632|Homo sapiens SH3 domain binding protein
1 protein.
Length = 632
Score = 29.9 bits (64), Expect = 6.8
Identities = 19/73 (26%), Positives = 29/73 (39%), Gaps = 1/73 (1%)
Query: 28 GTFKAAP-KDILEKRVIKTAKRRTTAPTDESSPSSDGSPLKFGAPSLTSTNTNNTEPANQ 86
G F A +D + R+ T PT ++P+ +P AP+L S T +
Sbjct: 416 GLFSAVTLQDTVSDRLASEELPSTAVPTPATTPAPAPAPAPAPAPALASAATKERTESEV 475
Query: 87 EDEDVPPKVEFTP 99
PKV +P
Sbjct: 476 PPRPASPKVTRSP 488
>AY283618-1|AAP37483.1| 1564|Homo sapiens hypothetical protein
protein.
Length = 1564
Score = 29.9 bits (64), Expect = 6.8
Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 2/84 (2%)
Query: 1 MSVKRQATTDLNHENWDQEDPEENKEMGTFKAAPKDILEKRVIKTAKRRTTAPTDESSPS 60
++ K + N +N ED ++ ++ + +D+ ++ + A+ TA T S+PS
Sbjct: 1036 ITTKEELVEMCNGKNGILEDSQKKEDTAFSDWSDEDVPDRTEVTEAEHTATATTPGSTPS 1095
Query: 61 SDGSPLKFGAPSLTSTNTNNTEPA 84
S L P T+T T T PA
Sbjct: 1096 PLSSLLPPPPPVATATAT--TVPA 1117
>AY220790-1|AAO63590.1| 1312|Homo sapiens SIN3A-associated protein
180 protein.
Length = 1312
Score = 29.9 bits (64), Expect = 6.8
Identities = 23/97 (23%), Positives = 41/97 (42%), Gaps = 1/97 (1%)
Query: 14 ENWDQEDPEENKEMGTFKAAPKDILEKRVIKTAKRRTTAPTDESSPSSDGSPLKFGAPSL 73
E+ D E+ E K+ K K IK KRR T+E + + A +
Sbjct: 791 EDTDYEEDEVTKKRKDVKKDTTGKSSKPQIKRGKRRY-CNTEECLKTGSPGKKEEKAKNK 849
Query: 74 TSTNTNNTEPANQEDEDVPPKVEFTPIAEENSVFDKR 110
S N+ ++ ++++ K + TP + N + +KR
Sbjct: 850 ESLCMENSSNSSSDEDEEETKAKMTPTKKYNGLEEKR 886
>AL513217-2|CAH72278.1| 631|Homo sapiens leiomodin 1 (smooth
muscle) protein.
Length = 631
Score = 29.9 bits (64), Expect = 6.8
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 5/73 (6%)
Query: 5 RQATTDLNHENWD---QEDPEENKEMGTFKAAPKDILEKRVIKTAKRRTTAPTDESSP-- 59
R T+L N D Q+ +E ++ K KD+LE + + P+ + SP
Sbjct: 460 RMTVTNLLSRNMDKQRQKRLQEQRQAQEAKGEKKDLLEVPKAGAVAKGSPKPSPQPSPKP 519
Query: 60 SSDGSPLKFGAPS 72
S SP K GAP+
Sbjct: 520 SPKNSPKKGGAPA 532
>AL445232-2|CAI16506.2| 1564|Homo sapiens zinc finger CCCH-type
containing 13 protein.
Length = 1564
Score = 29.9 bits (64), Expect = 6.8
Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 2/84 (2%)
Query: 1 MSVKRQATTDLNHENWDQEDPEENKEMGTFKAAPKDILEKRVIKTAKRRTTAPTDESSPS 60
++ K + N +N ED ++ ++ + +D+ ++ + A+ TA T S+PS
Sbjct: 1036 ITTKEELVEMCNGKNGILEDSQKKEDTAFSDWSDEDVPDRTEVTEAEHTATATTPGSTPS 1095
Query: 61 SDGSPLKFGAPSLTSTNTNNTEPA 84
S L P T+T T T PA
Sbjct: 1096 PLSSLLPPPPPVATATAT--TVPA 1117
>AL445232-1|CAI16505.1| 1668|Homo sapiens zinc finger CCCH-type
containing 13 protein.
Length = 1668
Score = 29.9 bits (64), Expect = 6.8
Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 2/84 (2%)
Query: 1 MSVKRQATTDLNHENWDQEDPEENKEMGTFKAAPKDILEKRVIKTAKRRTTAPTDESSPS 60
++ K + N +N ED ++ ++ + +D+ ++ + A+ TA T S+PS
Sbjct: 1036 ITTKEELVEMCNGKNGILEDSQKKEDTAFSDWSDEDVPDRTEVTEAEHTATATTPGSTPS 1095
Query: 61 SDGSPLKFGAPSLTSTNTNNTEPA 84
S L P T+T T T PA
Sbjct: 1096 PLSSLLPPPPPVATATAT--TVPA 1117
>AL157758-3|CAM13064.1| 1564|Homo sapiens zinc finger CCCH-type
containing 13 protein.
Length = 1564
Score = 29.9 bits (64), Expect = 6.8
Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 2/84 (2%)
Query: 1 MSVKRQATTDLNHENWDQEDPEENKEMGTFKAAPKDILEKRVIKTAKRRTTAPTDESSPS 60
++ K + N +N ED ++ ++ + +D+ ++ + A+ TA T S+PS
Sbjct: 1036 ITTKEELVEMCNGKNGILEDSQKKEDTAFSDWSDEDVPDRTEVTEAEHTATATTPGSTPS 1095
Query: 61 SDGSPLKFGAPSLTSTNTNNTEPA 84
S L P T+T T T PA
Sbjct: 1096 PLSSLLPPPPPVATATAT--TVPA 1117
>AL157758-2|CAI10903.1| 1668|Homo sapiens zinc finger CCCH-type
containing 13 protein.
Length = 1668
Score = 29.9 bits (64), Expect = 6.8
Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 2/84 (2%)
Query: 1 MSVKRQATTDLNHENWDQEDPEENKEMGTFKAAPKDILEKRVIKTAKRRTTAPTDESSPS 60
++ K + N +N ED ++ ++ + +D+ ++ + A+ TA T S+PS
Sbjct: 1036 ITTKEELVEMCNGKNGILEDSQKKEDTAFSDWSDEDVPDRTEVTEAEHTATATTPGSTPS 1095
Query: 61 SDGSPLKFGAPSLTSTNTNNTEPA 84
S L P T+T T T PA
Sbjct: 1096 PLSSLLPPPPPVATATAT--TVPA 1117
>AK126873-1|BAC86732.1| 605|Homo sapiens protein ( Homo sapiens
cDNA FLJ44925 fis, clone BRAMY3014613, highly similar
to Homo sapiens SH3-domain binding protein 1 (SH3BP1).
).
Length = 605
Score = 29.9 bits (64), Expect = 6.8
Identities = 19/73 (26%), Positives = 29/73 (39%), Gaps = 1/73 (1%)
Query: 28 GTFKAAP-KDILEKRVIKTAKRRTTAPTDESSPSSDGSPLKFGAPSLTSTNTNNTEPANQ 86
G F A +D + R+ T PT ++P+ +P AP+L S T +
Sbjct: 415 GLFSAVTLQDTVSDRLASEELPSTAVPTPATTPAPAPAPAPAPAPALASAATKERTESEV 474
Query: 87 EDEDVPPKVEFTP 99
PKV +P
Sbjct: 475 PPRPASPKVTRSP 487
>AK126556-1|BAC86592.1| 517|Homo sapiens protein ( Homo sapiens
cDNA FLJ44592 fis, clone BLADE2002310, highly similar
to Homo sapiens SH3-domain binding protein 1 (SH3BP1).
).
Length = 517
Score = 29.9 bits (64), Expect = 6.8
Identities = 19/73 (26%), Positives = 29/73 (39%), Gaps = 1/73 (1%)
Query: 28 GTFKAAP-KDILEKRVIKTAKRRTTAPTDESSPSSDGSPLKFGAPSLTSTNTNNTEPANQ 86
G F A +D + R+ T PT ++P+ +P AP+L S T +
Sbjct: 393 GLFSAVTLQDTVSDRLASEELPSTAVPTPATTPAPAPAPAPAPAPALASAATKERTESEV 452
Query: 87 EDEDVPPKVEFTP 99
PKV +P
Sbjct: 453 PPRPASPKVTRSP 465
>AF177377-1|AAG09279.2| 981|Homo sapiens cytoplasmic protein
protein.
Length = 981
Score = 29.9 bits (64), Expect = 6.8
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Query: 2 SVKRQATTDLNHENWDQEDPEENKEMGTFKAAPKDILEKRVIKTAKR 48
S+KR + + +H +W+ D NK + + PK L +V KTA +
Sbjct: 171 SIKRPSPAEKSHNSWENSDDSRNK-LSKIPSTPK--LIPKVTKTADK 214
>AC006038-1|AAY15086.1| 911|Homo sapiens unknown protein.
Length = 911
Score = 29.9 bits (64), Expect = 6.8
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Query: 2 SVKRQATTDLNHENWDQEDPEENKEMGTFKAAPKDILEKRVIKTAKR 48
S+KR + + +H +W+ D NK + + PK L +V KTA +
Sbjct: 101 SIKRPSPAEKSHNSWENSDDSRNK-LSKIPSTPK--LIPKVTKTADK 144
>AB020660-1|BAA74876.1| 967|Homo sapiens KIAA0853 protein protein.
Length = 967
Score = 29.9 bits (64), Expect = 6.8
Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 2/84 (2%)
Query: 1 MSVKRQATTDLNHENWDQEDPEENKEMGTFKAAPKDILEKRVIKTAKRRTTAPTDESSPS 60
++ K + N +N ED ++ ++ + +D+ ++ + A+ TA T S+PS
Sbjct: 335 ITTKEELVEMCNGKNGILEDSQKKEDTAFSDWSDEDVPDRTEVTEAEHTATATTPGSTPS 394
Query: 61 SDGSPLKFGAPSLTSTNTNNTEPA 84
S L P T+T T T PA
Sbjct: 395 PLSSLLPPPPPVATATAT--TVPA 416
>BC065540-1|AAH65540.1| 631|Homo sapiens PABPC4 protein protein.
Length = 631
Score = 29.5 bits (63), Expect = 9.0
Identities = 13/39 (33%), Positives = 24/39 (61%)
Query: 116 KKDGNFVDKGVGTLYIKKIENSDKHQLLVRANTALGNIL 154
++D + GVG ++IK ++ S +++L +A GNIL
Sbjct: 88 QRDPSLRKSGVGNVFIKNLDKSIDNKVLYDTFSAFGNIL 126
>AY584611-1|AAS91740.1| 2367|Homo sapiens GPR158-like 1 receptor
protein.
Length = 2367
Score = 29.5 bits (63), Expect = 9.0
Identities = 28/82 (34%), Positives = 35/82 (42%), Gaps = 11/82 (13%)
Query: 26 EMG--TFKAAPKDILEKRVIKTAKRRTTAPTDESSPSSDGSPLKFGAPSLTSTNTNNTEP 83
EMG T KA K L ++ R +T P SSP D S K G+ L + + T+
Sbjct: 1516 EMGEQTVKAVQK--LSQQQESVCPRESTVP-GHSSPCLDNSSSKAGSQFLCNGGSRATQV 1572
Query: 84 ANQED------EDVPPKVEFTP 99
QED E P K E P
Sbjct: 1573 CPQEDLRPEAQEATPAKTEICP 1594
>AL121581-3|CAC17005.1| 1121|Homo sapiens myelin transcription
factor 1 protein.
Length = 1121
Score = 29.5 bits (63), Expect = 9.0
Identities = 22/99 (22%), Positives = 40/99 (40%), Gaps = 1/99 (1%)
Query: 11 LNHENWDQEDPEENKEMGTFKAAPKDILEKRVIKTAKRRTTAPTDESSPSSDGSPLKFGA 70
L+HE D+E+ EE +E + ++ E+ + + +E + +P
Sbjct: 255 LSHEEEDEEEEEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEAAPDVIFQ 314
Query: 71 PSLTSTNTNNTEPANQEDEDVPPKVEFTPIAEENSVFDK 109
+ T+ P + E PK E++ I E S DK
Sbjct: 315 EDTSHTSAQKA-PELRGPESPSPKPEYSVIVEVRSDDDK 352
>AK123158-1|BAC85544.1| 572|Homo sapiens protein ( Homo sapiens
cDNA FLJ41163 fis, clone BRACE2039734. ).
Length = 572
Score = 29.5 bits (63), Expect = 9.0
Identities = 27/97 (27%), Positives = 40/97 (41%), Gaps = 9/97 (9%)
Query: 17 DQEDPEENKEMGTFKAA--PKDILEKRV-IKTAKRRTTAPTDESSPSSDGSPLKFGAPSL 73
+ ++ +E KE T KA PK+ EK+ T K +++ + P S+ S LK
Sbjct: 414 EPKEKKEPKEPKTPKAPKIPKEPKEKKAKTATPKPKSSKKSSNKKPDSEASALK------ 467
Query: 74 TSTNTNNTEPANQEDEDVPPKVEFTPIAEENSVFDKR 110
N TE D D P P +E+ KR
Sbjct: 468 KKVNKGKTEGPENSDLDKTPPPSPPPEEDEDPGVQKR 504
>AB020642-1|BAA74858.2| 1167|Homo sapiens KIAA0835 protein protein.
Length = 1167
Score = 29.5 bits (63), Expect = 9.0
Identities = 22/99 (22%), Positives = 40/99 (40%), Gaps = 1/99 (1%)
Query: 11 LNHENWDQEDPEENKEMGTFKAAPKDILEKRVIKTAKRRTTAPTDESSPSSDGSPLKFGA 70
L+HE D+E+ EE +E + ++ E+ + + +E + +P
Sbjct: 301 LSHEEEDEEEEEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEAAPDVIFQ 360
Query: 71 PSLTSTNTNNTEPANQEDEDVPPKVEFTPIAEENSVFDK 109
+ T+ P + E PK E++ I E S DK
Sbjct: 361 EDTSHTSAQKA-PELRGPESPSPKPEYSVIVEVRSDDDK 398
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.309 0.128 0.360
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,406,075
Number of Sequences: 224733
Number of extensions: 1631210
Number of successful extensions: 5227
Number of sequences better than 10.0: 82
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 45
Number of HSP's that attempted gapping in prelim test: 5136
Number of HSP's gapped (non-prelim): 117
length of query: 212
length of database: 73,234,838
effective HSP length: 87
effective length of query: 125
effective length of database: 53,683,067
effective search space: 6710383375
effective search space used: 6710383375
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
S2: 63 (29.5 bits)
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