Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000995-TA|BGIBMGA000995-PA|IPR000156|RanBP1
(212 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_03_0628 - 16367841-16369259 44 9e-05
03_05_0609 - 26093605-26093730,26094240-26094329,26094687-260948... 42 5e-04
03_06_0328 - 33172369-33173691 36 0.018
11_01_0088 - 662984-663024,663743-663774,664079-664503,665048-66... 35 0.043
08_01_0620 - 5416197-5416225,5416333-5416652,5417144-5417235,541... 31 0.69
05_01_0146 - 953957-956278,956468-956786,957185-957213 31 0.69
08_01_0068 + 471729-472460,472578-472655,473270-473507,474130-47... 31 0.92
03_05_0478 - 24712157-24712177,24712206-24712260,24712377-247124... 30 1.6
12_02_0639 + 21443480-21443589,21444022-21444211,21444327-214444... 29 2.1
01_01_0014 + 84379-84600,84737-84830,84935-85086,85212-85299,853... 29 2.1
11_06_0710 - 26492093-26493460 29 2.8
06_03_0924 - 25976629-25976979,25977471-25978424,25978512-259785... 29 2.8
06_02_0325 + 14428065-14428799,14428916-14428993,14429607-144298... 29 2.8
05_01_0454 + 3610608-3613136 29 2.8
02_05_0309 + 27762613-27763070,27763940-27764060,27764168-277642... 29 2.8
06_01_1179 + 10137652-10138038 29 3.7
04_03_0694 + 18781776-18781994,18782475-18782648,18782743-187830... 29 3.7
02_04_0590 - 24154366-24155742 29 3.7
09_04_0614 - 18962141-18962716,18962839-18963119,18964092-18964293 28 4.9
08_02_1182 + 24992256-24992708,24992942-24993238 28 4.9
05_03_0582 - 15738503-15739301,15739385-15739642,15740585-157406... 28 4.9
04_04_0822 + 28352941-28353825,28353863-28354016,28354714-283547... 28 4.9
04_01_0058 + 592846-593185,594641-595182,596298-596987,597078-59... 28 4.9
12_02_0642 + 21454142-21454251,21454683-21454872,21454988-214550... 28 6.5
12_02_0633 + 21402847-21402862,21403143-21404975,21405052-214051... 28 6.5
08_01_0033 + 244930-245105,245297-245344,245835-246539,246652-24... 28 6.5
06_03_0097 - 16607936-16608712,16610114-16610320,16611220-166113... 28 6.5
06_02_0136 + 12195422-12195435,12196047-12196122,12196896-121977... 28 6.5
05_03_0187 + 9413575-9414895,9415014-9415289,9415513-9415631,941... 28 6.5
05_03_0065 - 7953414-7953845,7953963-7954081,7954158-7955990,795... 28 6.5
01_06_0544 + 30118208-30118417,30118959-30119063,30119179-301192... 28 6.5
09_04_0247 + 16030543-16031324,16032812-16033088,16033374-160335... 27 8.6
05_01_0569 + 5056261-5057712 27 8.6
02_04_0089 + 19638760-19638844,19640495-19641528,19642266-19642322 27 8.6
02_01_0279 - 1860410-1860508,1861536-1861889,1862660-1862805,186... 27 8.6
>05_03_0628 - 16367841-16369259
Length = 472
Score = 44.0 bits (99), Expect = 9e-05
Identities = 27/74 (36%), Positives = 43/74 (58%), Gaps = 5/74 (6%)
Query: 2 SVKRQATTDLNHENWDQEDPEENKEMGTFKAAPKDILEKRVIKTAKRRTTAPTDESSPSS 61
S KR A T +N +N + +D +EMGTFK A ++++ R I +R+ + S+PS+
Sbjct: 10 SRKRVAGTQINKDNPEPDDDSTEQEMGTFKRASEEVMATRRIVKVRRQQPS----SAPSN 65
Query: 62 DGSPLKFGAPSLTS 75
S ++F PS TS
Sbjct: 66 PFSAIRF-TPSDTS 78
Score = 33.9 bits (74), Expect = 0.099
Identities = 34/159 (21%), Positives = 67/159 (42%), Gaps = 9/159 (5%)
Query: 61 SDGSPLKFGAPSLTSTNTNNTEPANQEDEDVPPKVEFT--PI--AEEN--SVFDKRCKVF 114
+DGS F + S+ ++N ++ PA + P K P+ EEN ++F ++
Sbjct: 297 TDGS--SFPSFSIGASNNGSSSPALATSAEAPKKFAMPEGPVETGEENEKAIFTADSALY 354
Query: 115 VKKDGNFVDKGVGTLYIKKIENSDKHQLLVRANTALGNILLNLRLSAGIPTQRMGKNNVM 174
DG + ++G G L + + + LV ++LN L + + M K V
Sbjct: 355 EYLDGGWKERGKGELKLNIPVSGGERSRLVMRTKGNYRLVLNASLYEDMSLKDMDKKGVT 414
Query: 175 IICIPT-PDSKPPPTSVLIRVKTPEEADEVLETLNKYKA 212
C+ + DS+ + ++ + +E + +KA
Sbjct: 415 FACMNSIGDSQSGLATFALKFRDTSIREEFKAAVEMHKA 453
>03_05_0609 -
26093605-26093730,26094240-26094329,26094687-26094806,
26094941-26095038,26095207-26095248,26095994-26096173,
26096361-26096517,26097162-26097249,26097592-26097746,
26100131-26100412
Length = 445
Score = 41.5 bits (93), Expect = 5e-04
Identities = 46/147 (31%), Positives = 66/147 (44%), Gaps = 23/147 (15%)
Query: 75 STNTNNTEPANQEDEDVPPKVEFTPI---AEENS---VFDKRCKVFVKKD---GNFVDKG 125
S N + E + DED P+ +P AEE V++ +CKV+VK D + D G
Sbjct: 287 SGNKSAAEASGDADEDAEPEQPSSPSVKKAEEKGIVVVYEAKCKVYVKHDDPANGWKDIG 346
Query: 126 VGTLYIKKIENSDKHQL----LVRANTALGNILLNLRLSAGIPTQRMGKNNVMIICIPTP 181
VG L I+ E ++K + +G ILLN + GI + K+ V I T
Sbjct: 347 VGQLNIRCKEGAEKASKESTPTIVIRNDVGKILLNALIYKGI-KMNVKKSTVASI-FHTS 404
Query: 182 DSKPPPT--------SVLIRVKTPEEA 200
D +P + + LIRVK E A
Sbjct: 405 DGQPSESGSATVVARTYLIRVKNDEAA 431
>03_06_0328 - 33172369-33173691
Length = 440
Score = 36.3 bits (80), Expect = 0.018
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Query: 154 LLNLRLSAGIPTQRMGKNNVMIICIPTPDSKPPPTSVLIRVKTPEEADEVL---ETLNKY 210
LL + + T R +V+ +C P P S+PPP S V TP + L ET N++
Sbjct: 173 LLGRDMRSDRETTRRFFQDVLCLCPPPPSSRPPPPSSFSAVTTPWQFKNPLFPPETPNRF 232
Query: 211 KA 212
KA
Sbjct: 233 KA 234
>11_01_0088 -
662984-663024,663743-663774,664079-664503,665048-666006,
666661-666846,666942-667044,667141-667323,667514-667606,
668092-668274,669011-669031
Length = 741
Score = 35.1 bits (77), Expect = 0.043
Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 5/88 (5%)
Query: 2 SVKRQATTDLNHENWDQEDPEENKEMGTFKAAPKDILEKRVIKTAKRRTTAPTDESSPSS 61
S +A ++ H N + P + E GT A P ++ + + R TA +S PS+
Sbjct: 644 SPSSEAPREIVHGNGFIQPPAKKLEFGTLGALPLEVTSQEL--GINRLNTA--SDSQPSA 699
Query: 62 DGSPLKF-GAPSLTSTNTNNTEPANQED 88
SP+ P ++S N +P + +D
Sbjct: 700 SASPMSLANNPGISSNQMRNAQPYHLKD 727
>08_01_0620 -
5416197-5416225,5416333-5416652,5417144-5417235,
5417304-5417394,5417489-5417577,5417812-5417929,
5418007-5418098,5418180-5418215,5418323-5418403,
5418510-5418617,5418809-5418901,5419045-5419146,
5419345-5419449,5419526-5419612,5419952-5420227
Length = 572
Score = 31.1 bits (67), Expect = 0.69
Identities = 26/98 (26%), Positives = 49/98 (50%), Gaps = 17/98 (17%)
Query: 5 RQATTDLNHENWDQEDPEENKEMGTFKAAPKDILEKRVIKTAKRRTTAPTDES----SPS 60
+ A++D ++ D+ D +E AAP ++K + K++ + + ES S S
Sbjct: 138 KPASSDSESDSDDEMDEDEKP------AAP---VKKTSVTAQKKKDDSDSSESESDESDS 188
Query: 61 SDGSPLKFGAPSLTSTNTNNTE----PANQEDEDVPPK 94
+ P K AP++ + N ++T+ ++ EDED PK
Sbjct: 189 DEDVPTKSKAPAVAAKNDDSTDGSESESDSEDEDAAPK 226
>05_01_0146 - 953957-956278,956468-956786,957185-957213
Length = 889
Score = 31.1 bits (67), Expect = 0.69
Identities = 24/108 (22%), Positives = 47/108 (43%), Gaps = 5/108 (4%)
Query: 3 VKRQATTDLNHENWDQEDPEENKEMGTFKAAPKD--ILEKRVIKTAKRRTTAPTDESSPS 60
+ R + D+NHE E E +E+ T + I+EK+ K+ T + DE P
Sbjct: 780 LNRSSNGDMNHEEEKGETKVEQEEVKTECTTQESNKIIEKQPHPDRKQETVSSKDELEPK 839
Query: 61 SDGS---PLKFGAPSLTSTNTNNTEPANQEDEDVPPKVEFTPIAEENS 105
D + P + + + T+P Q+ ++ P +F + ++ +
Sbjct: 840 EDTNTEHPNGTVSEDTSKVAMSPTKPQQQQKKNKPLLKKFGSLLKKKN 887
>08_01_0068 +
471729-472460,472578-472655,473270-473507,
474130-474205,474820-474961,475326-475619,476037-476249
Length = 590
Score = 30.7 bits (66), Expect = 0.92
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Query: 39 EKRVIKTAKRRTTAPTDESSPSSDGSPLKFGAPSLTSTNTNNTEPANQEDEDVP 92
+K +K + +P SSPS+ + K +PS ST N T PA+ + ++ P
Sbjct: 11 KKGKLKASITADASPMSPSSPSTVDASSK--SPSSPSTEENGTSPAHHQADNAP 62
>03_05_0478 -
24712157-24712177,24712206-24712260,24712377-24712473,
24712558-24713302,24713822-24714189,24714279-24714419,
24715480-24715849
Length = 598
Score = 29.9 bits (64), Expect = 1.6
Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 5/82 (6%)
Query: 52 APTDESSPSSDGSPLKFG-APSLTSTNTNNTEPANQEDEDVP---PKVEFTPIAEENSVF 107
+P+ +SPS G + APS +NN + A +++VP P+ + T AE ++
Sbjct: 98 SPSPAASPSELGDDESWSRAPSAAELESNNNDLAEIRNDNVPASIPQKQKTSKAERRAIQ 157
Query: 108 D-KRCKVFVKKDGNFVDKGVGT 128
+ +R K+ K GT
Sbjct: 158 EAQRAAKAAAKEAGLSGKSAGT 179
>12_02_0639 +
21443480-21443589,21444022-21444211,21444327-21444408,
21444563-21445054,21445221-21446246,21446470-21446588,
21446706-21447149
Length = 820
Score = 29.5 bits (63), Expect = 2.1
Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 9/76 (11%)
Query: 17 DQEDPEENKEMGTFKAAPKDILEKRVIKTAKRRT--------TAPTDESSPSSDGSPLKF 68
DQ+ +E+++ T AP KR + T KR+ AP +PSSD
Sbjct: 738 DQQCAKESQQHTT-PQAPAPAKRKRPVHTKKRKVRSLQSLMRNAPVHPEAPSSDSEDCDD 796
Query: 69 GAPSLTSTNTNNTEPA 84
G P TS + + P+
Sbjct: 797 GIPMHTSDSDKSPSPS 812
>01_01_0014 +
84379-84600,84737-84830,84935-85086,85212-85299,
85348-86681,87291-87398,87500-87583
Length = 693
Score = 29.5 bits (63), Expect = 2.1
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 11/79 (13%)
Query: 32 AAPKDILEKRVIKTAKRRTTAPTDESSPSSDGSPLKFGAPSLTSTNTNNTEPANQEDEDV 91
AA KD+ +RV+ T+AP D+SSP G P+ S + T P Q+ +
Sbjct: 24 AAVKDLRLRRVVPL----TSAPLDDSSPDPAG-------PAAKSGSAETTPPEAQDGRER 72
Query: 92 PPKVEFTPIAEENSVFDKR 110
P V+ + + + F R
Sbjct: 73 KPVVQRSKLVHAPASFGYR 91
>11_06_0710 - 26492093-26493460
Length = 455
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/53 (28%), Positives = 29/53 (54%)
Query: 4 KRQATTDLNHENWDQEDPEENKEMGTFKAAPKDILEKRVIKTAKRRTTAPTDE 56
K+++ + + D+ED +++K G A PK+ E+ +A T+AP +E
Sbjct: 228 KKKSKSKSKSSSSDEEDEKKSKSEGQAAAKPKEEDEEGGSASASASTSAPKNE 280
>06_03_0924 - 25976629-25976979,25977471-25978424,25978512-25978565,
25979135-25979254,25979357-25979532,25979624-25980107,
25980541-25980744,25981671-25981877,25982179-25982271,
25982433-25982621,25983364-25983423,25983591-25983927,
25984195-25984432,25984614-25984816,25985549-25986554,
25987125-25987290,25987715-25987824,25987944-25988195,
25988360-25988402,25988488-25988550,25989512-25989624,
25990787-25990838
Length = 1824
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/46 (28%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 19 EDPEENK-EMGTFKAAPKDILEKRVIKTAKRRTTAPTDESSPSSDG 63
EDPE ++ ++ + ++ P DI+ IKT+ +R A + ++G
Sbjct: 1405 EDPETSEMDVNSIRSHPPDIVSNAQIKTSNKRLVAKVSSEAFETEG 1450
>06_02_0325 +
14428065-14428799,14428916-14428993,14429607-14429844,
14431199-14431296,14431770-14432063,14432418-14432702
Length = 575
Score = 29.1 bits (62), Expect = 2.8
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Query: 46 AKRRTTA---PTDESSPSSDGSPLKFGAPSLTSTNTNNTEPANQEDEDVP 92
+K TTA P SSPS+ + K +PS ST N T PA+ + ++ P
Sbjct: 15 SKASTTADASPMSLSSPSTVDASSK--SPSSPSTEENGTSPAHHQADNAP 62
>05_01_0454 + 3610608-3613136
Length = 842
Score = 29.1 bits (62), Expect = 2.8
Identities = 31/108 (28%), Positives = 44/108 (40%), Gaps = 8/108 (7%)
Query: 57 SSPSSDGSPLKFGAPSLTSTNTNNTEP---ANQEDEDVPPKVEFTPIAEENSVFDKRCKV 113
S PSS +PL A S ST T T + + D ++ F + E + FD++ +
Sbjct: 452 SRPSSSWTPLSLNALSFLSTGTRTTSRTTYTSGTNSDTSYRIPFVVLQEATNHFDEQMVI 511
Query: 114 FVKKDGNFVDKGV---GTLYIKKIENSDKHQLLVRANTALGNILLNLR 158
V G V K V T K N HQ + T + +L LR
Sbjct: 512 GVGGFGK-VYKAVLQDSTKVAVKRGNQKSHQGIREFRTEI-ELLSGLR 557
>02_05_0309 +
27762613-27763070,27763940-27764060,27764168-27764287,
27764633-27764863,27764964-27765503
Length = 489
Score = 29.1 bits (62), Expect = 2.8
Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Query: 36 DILEKRVIKTAK-RRTTAPTDESSPSSDGSPLKFGAPSLTSTNTNNTEPANQEDEDVP 92
+ L+ ++KT K R TA + PSS GSP P T + Q++ D P
Sbjct: 326 NFLKTLILKTVKGREETAMPSSAFPSSSGSPSDKDEPQALEHLDKPTICSTQQNNDFP 383
>06_01_1179 + 10137652-10138038
Length = 128
Score = 28.7 bits (61), Expect = 3.7
Identities = 12/46 (26%), Positives = 22/46 (47%)
Query: 48 RRTTAPTDESSPSSDGSPLKFGAPSLTSTNTNNTEPANQEDEDVPP 93
+ T A T +P+ +P K G + +T + PA ++ +PP
Sbjct: 36 KSTAAATPAKAPTVASAPRKAGPAAAPTTTVATSAPAGGDEVSIPP 81
>04_03_0694 +
18781776-18781994,18782475-18782648,18782743-18783057,
18783791-18785569,18786334-18786651,18787052-18787105
Length = 952
Score = 28.7 bits (61), Expect = 3.7
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
Query: 153 ILLNLRLSAGIPTQRMGKNNVMIICIPTPDSKPPPTSVLIRVKTPEEADEVLETLNK 209
ILL L G P R G N++ ++ IP+ P V I V +P+ E LE K
Sbjct: 541 ILLRLCTDGGDPMTRRGSNSMHLLMIPS-----PMDFVNIFVHSPKHLMEFLENYTK 592
>02_04_0590 - 24154366-24155742
Length = 458
Score = 28.7 bits (61), Expect = 3.7
Identities = 11/21 (52%), Positives = 13/21 (61%)
Query: 107 FDKRCKVFVKKDGNFVDKGVG 127
FD RCKVF G F + G+G
Sbjct: 229 FDSRCKVFASCKGRFNEYGIG 249
>09_04_0614 - 18962141-18962716,18962839-18963119,18964092-18964293
Length = 352
Score = 28.3 bits (60), Expect = 4.9
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Query: 84 ANQEDEDVPPKVEFTPIAEENSVFDKRCKVFVKKDGNFVDKGVGTLYIKKIENSD 138
A +++E +PP F P EE + R K+ DG F + + + + K E D
Sbjct: 14 AKKKEESLPPGFRFHPTDEELITYYLRQKI---ADGGFTARAIAEVDLNKCEPWD 65
>08_02_1182 + 24992256-24992708,24992942-24993238
Length = 249
Score = 28.3 bits (60), Expect = 4.9
Identities = 31/135 (22%), Positives = 51/135 (37%), Gaps = 5/135 (3%)
Query: 4 KRQATTDLNHENWDQEDPEENKEMGTFKAAPKDILEKRVIKTAKRRTTAPTDESSPSSDG 63
+R+A D E +K + +A P V K ++R + S SD
Sbjct: 96 RRRAFMDRERRLASMESKNHSKGKKSSEACPGSSHLASVQKPPRQRPKSNPPTSHQGSDS 155
Query: 64 SPLKFGAPSLTSTNTNNTEPANQEDEDVPPKVEFTPIAEENSVFDKRCKVFVKKDGNFVD 123
+F PS++S +T + + +D E T S KR +K G FV
Sbjct: 156 KNEEFSKPSVSSDSTPSHLSVHSSSQDKEVDGESTDEGNSGSPGSKR--KGKRKKGIFVS 213
Query: 124 KGVGTLYIKKIENSD 138
T + +++ SD
Sbjct: 214 P---TKSVARVKRSD 225
>05_03_0582 -
15738503-15739301,15739385-15739642,15740585-15740670,
15740879-15740960,15741044-15741213,15742081-15742194,
15742984-15743082,15743171-15743249,15744604-15744710
Length = 597
Score = 28.3 bits (60), Expect = 4.9
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Query: 55 DESSPSSDGSPLKFGAPSLTSTNTNNTEPANQEDEDVPPKVEFTPIAEENSVF 107
+ESS + +P+ GAP T ++E+ED EF+ +A NS F
Sbjct: 286 NESSAETTSTPVATGAPRAAVAAIVPTNVFDEEEEDEDD--EFSQLARRNSKF 336
>04_04_0822 +
28352941-28353825,28353863-28354016,28354714-28354754,
28355060-28355310,28355411-28355591,28356138-28356323,
28356396-28356569,28356992-28357150,28357424-28357501,
28357612-28357748,28357980-28358044,28358115-28358148,
28358216-28358372,28359135-28359196,28360041-28360118,
28360940-28361042
Length = 914
Score = 28.3 bits (60), Expect = 4.9
Identities = 14/44 (31%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 127 GTLYIKKIENSDKHQLLVRANTALGNILLNLRLSAGIPTQRMGK 170
G + +KK+ N++ H+L+ R + LG +L RL + + Q + K
Sbjct: 521 GDIDLKKLLNAEDHELISRIKSILGPFILR-RLKSDVMQQLVPK 563
>04_01_0058 +
592846-593185,594641-595182,596298-596987,597078-597233,
597277-597856,598601-598764,598907-599100,599702-599750,
599777-599806
Length = 914
Score = 28.3 bits (60), Expect = 4.9
Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 4/76 (5%)
Query: 26 EMGTFKAAPKDILEKRVIKTAKRRTTAPTDESSPSSDGSPLKFGAPSLTSTNTNNTEPAN 85
E+GT A D +++ K A + TD + S L P+ TST++ NT +
Sbjct: 588 EIGTCSFANTDCGQQKD-KDATSNPSV-TDNDDNLKEESALSVEEPNTTSTSSKNTRKLS 645
Query: 86 --QEDEDVPPKVEFTP 99
+E +D P+VE P
Sbjct: 646 NAKESKDESPQVEPKP 661
>12_02_0642 +
21454142-21454251,21454683-21454872,21454988-21455069,
21455224-21455802,21455854-21456909,21457133-21457251,
21457369-21457812
Length = 859
Score = 27.9 bits (59), Expect = 6.5
Identities = 22/76 (28%), Positives = 32/76 (42%), Gaps = 9/76 (11%)
Query: 17 DQEDPEENKEMGTFKAAPKDILEKRVIKTAKRRT--------TAPTDESSPSSDGSPLKF 68
DQ+ +E+++ T AP KR + T KR+ AP +PSSD
Sbjct: 777 DQQCAKESQQHTT-PQAPAPAKRKRPVHTKKRKVRSLQSLMRNAPVHPEAPSSDSEDCDD 835
Query: 69 GAPSLTSTNTNNTEPA 84
G P TS + P+
Sbjct: 836 GIPMHTSDSDKLPSPS 851
>12_02_0633 +
21402847-21402862,21403143-21404975,21405052-21405170,
21405288-21405722
Length = 800
Score = 27.9 bits (59), Expect = 6.5
Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
Query: 17 DQEDPEENKEMGTFKA-AP---KDILEKRVIKTAKRRTTAPTDESSPSSDGSPLKFGAPS 72
DQ+ +E+++ T +A AP K+ +++V AP +PSSD G P
Sbjct: 721 DQQCAKESQQHTTPQAPAPAKRKNTKKRKVRSLQSLMRNAPVHPEAPSSDSEDCDDGIPM 780
Query: 73 LTSTNTNNTEPA 84
TS + + P+
Sbjct: 781 QTSDSDKSPSPS 792
>08_01_0033 + 244930-245105,245297-245344,245835-246539,246652-246796,
246893-247240,247882-248721,248786-248832,249470-249596,
249672-249836,249973-251370,251453-251713,251802-252161
Length = 1539
Score = 27.9 bits (59), Expect = 6.5
Identities = 22/66 (33%), Positives = 28/66 (42%), Gaps = 2/66 (3%)
Query: 5 RQATTDLNHENWDQEDPEENKEMGTFKAAPKDILEKRVIK-TAKRRTTAPTDESSPSSDG 63
RQ T D E W + K + +PK+ +KR K AK T P SS +S G
Sbjct: 1449 RQYTWDKQLETWVKSSLVVPKNVSPTVVSPKE-YKKRFRKFMAKHFLTVPDTWSSENSSG 1507
Query: 64 SPLKFG 69
FG
Sbjct: 1508 PSKSFG 1513
>06_03_0097 -
16607936-16608712,16610114-16610320,16611220-16611336,
16611409-16611690,16611811-16612294,16612791-16612929,
16613138-16613243,16613396-16613562,16613632-16613707,
16614173-16614321,16614813-16614874,16615232-16615335,
16616856-16616950,16617046-16617136,16617785-16617922
Length = 997
Score = 27.9 bits (59), Expect = 6.5
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 5/52 (9%)
Query: 152 NILLNLRLSAGIPTQRMGKNNVMIICIPTPDSKPPPTSVLIRVKTPEEADEV 203
N++LN RL A + +GK + + P KP P +VL R +TP A+ +
Sbjct: 769 NMVLN-RLVAEDFLESLGKE----LGLDVPPEKPTPPNVLFRSETPSTANAI 815
>06_02_0136 +
12195422-12195435,12196047-12196122,12196896-12197707,
12197941-12198010,12199469-12199557,12199633-12199666
Length = 364
Score = 27.9 bits (59), Expect = 6.5
Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 4/53 (7%)
Query: 43 IKTAKRRTTAPTDESSPSSDGS----PLKFGAPSLTSTNTNNTEPANQEDEDV 91
+K ++ T AP SS ++ S PL FG P +++ P Q DV
Sbjct: 51 VKVSRNPTVAPPPSSSTTTRASSSLQPLSFGRPHHVGYQADSSNPRQQISMDV 103
>05_03_0187 +
9413575-9414895,9415014-9415289,9415513-9415631,
9415749-9416192
Length = 719
Score = 27.9 bits (59), Expect = 6.5
Identities = 21/76 (27%), Positives = 32/76 (42%), Gaps = 9/76 (11%)
Query: 17 DQEDPEENKEMGTFKAAPKDILEKRVIKTAKRRT--------TAPTDESSPSSDGSPLKF 68
DQ+ +E+++ T AP KR + KR+ AP +PSSD
Sbjct: 637 DQQCAKESQQHTT-PQAPAPAKRKRPVHAKKRKVRSLQSLMRNAPVHPEAPSSDSEDCDD 695
Query: 69 GAPSLTSTNTNNTEPA 84
G P TS + + P+
Sbjct: 696 GIPMQTSDSDKSPSPS 711
>05_03_0065 -
7953414-7953845,7953963-7954081,7954158-7955990,
7957103-7957559
Length = 946
Score = 27.9 bits (59), Expect = 6.5
Identities = 21/76 (27%), Positives = 32/76 (42%), Gaps = 9/76 (11%)
Query: 17 DQEDPEENKEMGTFKAAPKDILEKRVIKTAKRRT--------TAPTDESSPSSDGSPLKF 68
DQ+ +E+++ T AP KR + KR+ AP +PSSD
Sbjct: 868 DQQCAKESQQHTT-PQAPAPAKRKRPVHAKKRKVRSLQSLMRNAPVHPEAPSSDSEDCDD 926
Query: 69 GAPSLTSTNTNNTEPA 84
G P TS + + P+
Sbjct: 927 GIPMQTSDSDKSPSPS 942
>01_06_0544 +
30118208-30118417,30118959-30119063,30119179-30119260,
30119415-30121250,30121327-30121445,30121563-30122006
Length = 931
Score = 27.9 bits (59), Expect = 6.5
Identities = 21/76 (27%), Positives = 32/76 (42%), Gaps = 9/76 (11%)
Query: 17 DQEDPEENKEMGTFKAAPKDILEKRVIKTAKRRT--------TAPTDESSPSSDGSPLKF 68
DQ+ +E+++ T AP KR + KR+ AP +PSSD
Sbjct: 849 DQQCAKESQQHTT-PQAPAPAKRKRPVHAKKRKVRSLQSLMRNAPVHPEAPSSDSEDCDD 907
Query: 69 GAPSLTSTNTNNTEPA 84
G P TS + + P+
Sbjct: 908 GIPMQTSDSDKSPSPS 923
>09_04_0247 +
16030543-16031324,16032812-16033088,16033374-16033559,
16033714-16033866,16034277-16034702,16035922-16037668,
16037687-16038183,16038519-16038709,16038786-16038941,
16040077-16040311,16040416-16040723,16041279-16041439,
16041852-16041895,16041975-16042067
Length = 1751
Score = 27.5 bits (58), Expect = 8.6
Identities = 27/139 (19%), Positives = 54/139 (38%), Gaps = 5/139 (3%)
Query: 5 RQATTDLN---HENWDQEDPEENKEMGTFKAAPKDILEKRVIKTAKRRTTAPTDESSPSS 61
+Q + DL+ +N D + P E K A + + +++A +P
Sbjct: 777 KQVSDDLSPSEKKNSDDQSPGEKKVSDDQSTANLNGAPRERVQSADATAESP-QVHVVEK 835
Query: 62 DGSPLKFGAPSLTSTNTNNTEPANQEDEDVPPKVEFTPIAEENSVFDKRCKVFVKKDGNF 121
DG ++ T T+ + ++ +E PP V T + + FD ++ V
Sbjct: 836 DGDAVRASEDKATHNVTDQSMQVSKTEEPKPPPVNVTQALDALTGFDDSTQMAVNSVFGV 895
Query: 122 VDKGVGTLYIK-KIENSDK 139
++ + + + EN DK
Sbjct: 896 IENMIDQFEKQHESENGDK 914
>05_01_0569 + 5056261-5057712
Length = 483
Score = 27.5 bits (58), Expect = 8.6
Identities = 13/24 (54%), Positives = 19/24 (79%), Gaps = 1/24 (4%)
Query: 42 VIKTAKRRTTAPTDESSPSS-DGS 64
V +++KRR APT+ +SPS+ DGS
Sbjct: 76 VSRSSKRRKKAPTNSTSPSNRDGS 99
>02_04_0089 + 19638760-19638844,19640495-19641528,19642266-19642322
Length = 391
Score = 27.5 bits (58), Expect = 8.6
Identities = 12/44 (27%), Positives = 21/44 (47%)
Query: 146 ANTALGNILLNLRLSAGIPTQRMGKNNVMIICIPTPDSKPPPTS 189
A T +GN+L + + G P + +V + + + KP P S
Sbjct: 296 AGTYIGNLLRRIEMKQGTPLRPQAPIDVYVFALFNENLKPGPAS 339
>02_01_0279 -
1860410-1860508,1861536-1861889,1862660-1862805,
1862885-1862925,1863010-1863173,1863217-1863281,
1863410-1863670,1863754-1863817,1863946-1864006,
1864112-1864473
Length = 538
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/29 (48%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Query: 177 CIPTPDSKPPPTSVLIRVKTPEEADEVLE 205
C P P + PPP L TP +ADEV+E
Sbjct: 81 CDPDP-TPPPPLPPLQPQATPMDADEVVE 108
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.309 0.128 0.360
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,899,965
Number of Sequences: 37544
Number of extensions: 313326
Number of successful extensions: 999
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 984
Number of HSP's gapped (non-prelim): 42
length of query: 212
length of database: 14,793,348
effective HSP length: 79
effective length of query: 133
effective length of database: 11,827,372
effective search space: 1573040476
effective search space used: 1573040476
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
S2: 58 (27.5 bits)
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