Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000994-TA|BGIBMGA000994-PA|IPR010097|Malate
dehydrogenase, NAD-dependent, eukaryotes and gamma proteobacteria,
IPR001236|Lactate/malate dehydrogenase
(329 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF002197-5|AAB53985.1| 341|Caenorhabditis elegans Malate dehydr... 185 4e-47
Z49127-1|CAA88944.1| 333|Caenorhabditis elegans Hypothetical pr... 46 3e-05
U15420-1|AAA67063.1| 333|Caenorhabditis elegans lactate dehydro... 46 3e-05
L43563-1|AAC41613.1| 333|Caenorhabditis elegans L-lactate dehyd... 46 3e-05
U80437-10|AAN84839.1| 656|Caenorhabditis elegans Hypothetical p... 31 1.1
U29380-18|ABB88224.1| 733|Caenorhabditis elegans Zygote defecti... 31 1.5
U29380-17|AAA68733.3| 736|Caenorhabditis elegans Zygote defecti... 31 1.5
U29380-16|AAS60254.1| 761|Caenorhabditis elegans Zygote defecti... 31 1.5
U29380-15|AAS60253.1| 777|Caenorhabditis elegans Zygote defecti... 31 1.5
AY487140-1|AAR32790.1| 733|Caenorhabditis elegans centrosome at... 31 1.5
Z83230-4|CAB05744.1| 275|Caenorhabditis elegans Hypothetical pr... 29 6.0
U64862-7|AAB52622.1| 374|Caenorhabditis elegans Hypothetical pr... 29 6.0
AF106587-1|AAC78226.1| 849|Caenorhabditis elegans Msh (muts hom... 29 6.0
>AF002197-5|AAB53985.1| 341|Caenorhabditis elegans Malate
dehydrogenase protein 1 protein.
Length = 341
Score = 185 bits (450), Expect = 4e-47
Identities = 92/311 (29%), Positives = 177/311 (56%), Gaps = 3/311 (0%)
Query: 14 TTRSYQVTVVGATSEVGQVXXXXXXXXXXITKLVVHDNKEFTPGVTLDLSQIPSPSRILG 73
++++ +V ++GA +GQ + L ++D TPGV DLS I S +++
Sbjct: 25 SSQAPKVALLGAAGGIGQPLGLLLKQDPLVAHLALYDVVN-TPGVAADLSHIDSNAKVTA 83
Query: 74 LTGEDTLERALKNSDLIIAAGGLSQRPDISEKALLTANSQFIKSIISKLGRSCPIPFVGI 133
TG L A++N+D+I+ G+ ++P ++ L N+ ++ + + + ++ P + I
Sbjct: 84 HTGPKELYAAVENADVIVIPAGVPRKPGMTRDDLFNTNAGIVRDLAAVIAKASPKALIAI 143
Query: 134 VTEPINYLIPMTAEIMRNHGVYDEKKLFGITEIDAIRSQCLYATENNLKANDCYVPVIGG 193
+T P+N +P+ +E+++ GVYD K++FG+T +D +RSQ + A+ VPV+GG
Sbjct: 144 ITNPVNSTVPIASEVLKKAGVYDPKRVFGVTTLDVVRSQAFVSELKGHDASKTVVPVVGG 203
Query: 194 HSDKTIVPLLSQAKPTVEMKEKDLEEFTIKLRNCDGMITKAKRGC-IPNLSVAYSSFLFT 252
H+ TI+PLLSQ KP+ + E+++ + T ++++ + AK G LS+A + F
Sbjct: 204 HAGITIIPLLSQVKPSTKFSEEEISKLTPRIQDAGTEVVNAKAGAGSATLSMALAGARFA 263
Query: 253 KSILDALEGSPAKIHAFVDNNDF-GTSYFSSLVNLDKNGVKEMVRYSEFSKFECDLIEKS 311
+++ ++G A+V ++ G YFS+ V L NGV++++ + S +E LI+ S
Sbjct: 264 NALVRGIKGEKNVQCAYVASDAVKGVEYFSTPVELGPNGVEKILGVGKVSAYEQKLIDAS 323
Query: 312 LQQLRKDVSKG 322
+ +L K+++KG
Sbjct: 324 VPELNKNIAKG 334
>Z49127-1|CAA88944.1| 333|Caenorhabditis elegans Hypothetical
protein F13D12.2 protein.
Length = 333
Score = 46.4 bits (105), Expect = 3e-05
Identities = 30/122 (24%), Positives = 58/122 (47%), Gaps = 3/122 (2%)
Query: 78 DTLERALKNSDLIIAAGGLSQRPDISEKALLTANSQFIKSIISKLGRSCPIPFVGIVTEP 137
DT S L + G QR + +L+ N + K II +L + P + +V+ P
Sbjct: 80 DTDYSITAGSKLCVVTAGARQREGETRLSLVQRNVEIFKGIIPQLVKYSPDTCILVVSNP 139
Query: 138 INYLIPMTAEIMRNHGVYDEKKLFGITEIDAIRSQCLYATENNLKANDCYVPVIGGHSDK 197
++ L +T ++ G+ E+ T +D+ R + L + + N+ + C+ +IG H D
Sbjct: 140 VDVLTYVTWKLS---GLPRERVFGSGTNLDSARFRFLLSEKLNIAPSSCHGWIIGEHGDS 196
Query: 198 TI 199
++
Sbjct: 197 SV 198
>U15420-1|AAA67063.1| 333|Caenorhabditis elegans lactate
dehydrogenase protein.
Length = 333
Score = 46.4 bits (105), Expect = 3e-05
Identities = 30/122 (24%), Positives = 58/122 (47%), Gaps = 3/122 (2%)
Query: 78 DTLERALKNSDLIIAAGGLSQRPDISEKALLTANSQFIKSIISKLGRSCPIPFVGIVTEP 137
DT S L + G QR + +L+ N + K II +L + P + +V+ P
Sbjct: 80 DTDYSITAGSKLCVVTAGARQREGETRLSLVQRNVEIFKGIIPQLVKYSPDTCILVVSNP 139
Query: 138 INYLIPMTAEIMRNHGVYDEKKLFGITEIDAIRSQCLYATENNLKANDCYVPVIGGHSDK 197
++ L +T ++ G+ E+ T +D+ R + L + + N+ + C+ +IG H D
Sbjct: 140 VDVLTYVTWKLS---GLPRERVFGSGTNLDSARFRFLLSEKLNIAPSSCHGWIIGEHGDS 196
Query: 198 TI 199
++
Sbjct: 197 SV 198
>L43563-1|AAC41613.1| 333|Caenorhabditis elegans L-lactate
dehydrogenase protein.
Length = 333
Score = 46.4 bits (105), Expect = 3e-05
Identities = 30/122 (24%), Positives = 58/122 (47%), Gaps = 3/122 (2%)
Query: 78 DTLERALKNSDLIIAAGGLSQRPDISEKALLTANSQFIKSIISKLGRSCPIPFVGIVTEP 137
DT S L + G QR + +L+ N + K II +L + P + +V+ P
Sbjct: 80 DTDYSITAGSKLCVVTAGARQREGETRLSLVQRNVEIFKGIIPQLVKYSPDTCILVVSNP 139
Query: 138 INYLIPMTAEIMRNHGVYDEKKLFGITEIDAIRSQCLYATENNLKANDCYVPVIGGHSDK 197
++ L +T ++ G+ E+ T +D+ R + L + + N+ + C+ +IG H D
Sbjct: 140 VDVLTYVTWKLS---GLPRERVFGSGTNLDSARFRFLLSEKLNIAPSSCHGWIIGEHGDS 196
Query: 198 TI 199
++
Sbjct: 197 SV 198
>U80437-10|AAN84839.1| 656|Caenorhabditis elegans Hypothetical
protein C43E11.11 protein.
Length = 656
Score = 31.1 bits (67), Expect = 1.1
Identities = 19/63 (30%), Positives = 36/63 (57%), Gaps = 4/63 (6%)
Query: 259 LEGSPAKIHAFVDNNDFGTSYFSSLVNLDKNGVKEMVRY----SEFSKFECDLIEKSLQQ 314
L S A++H V+ NDF T++ ++ V+L + ++E R +E S+ + IEK ++
Sbjct: 326 LTHSLARLHKLVEENDFSTAHANAFVDLINSAMEEEHRKVDWDAELSQKMSNNIEKCIEI 385
Query: 315 LRK 317
+ K
Sbjct: 386 IAK 388
>U29380-18|ABB88224.1| 733|Caenorhabditis elegans Zygote defective:
embryonic lethalprotein 12, isoform d protein.
Length = 733
Score = 30.7 bits (66), Expect = 1.5
Identities = 27/128 (21%), Positives = 57/128 (44%), Gaps = 12/128 (9%)
Query: 136 EPINYLIPMTAEIMR---NHGVYDEKKLFGITEIDAIRSQCLYATENNLKANDCYVPVIG 192
+ + L P+ E++ +GV +E+KLF +I+ ++ Q EN LK +
Sbjct: 517 QELESLEPLKGELITLKSKNGVLEEEKLFATKQIEELQQQIEDLQENLLKNQE------- 569
Query: 193 GHSDKTIVPLLSQAKPTVEMKEKDLEEFTIKLRNCDGMITKAKRGCIPNLSVAYSSFLFT 252
H+ +V L Q + E++ + + E ++ + + + L V ++
Sbjct: 570 -HASGDVVGLKIQLE-KAEVEAQQMREAKMRAETNQAQVDEILKKRTAELEVNATALQKA 627
Query: 253 KSILDALE 260
K+++D LE
Sbjct: 628 KAVIDELE 635
>U29380-17|AAA68733.3| 736|Caenorhabditis elegans Zygote defective:
embryonic lethalprotein 12, isoform a protein.
Length = 736
Score = 30.7 bits (66), Expect = 1.5
Identities = 27/128 (21%), Positives = 57/128 (44%), Gaps = 12/128 (9%)
Query: 136 EPINYLIPMTAEIMR---NHGVYDEKKLFGITEIDAIRSQCLYATENNLKANDCYVPVIG 192
+ + L P+ E++ +GV +E+KLF +I+ ++ Q EN LK +
Sbjct: 520 QELESLEPLKGELITLKSKNGVLEEEKLFATKQIEELQQQIEDLQENLLKNQE------- 572
Query: 193 GHSDKTIVPLLSQAKPTVEMKEKDLEEFTIKLRNCDGMITKAKRGCIPNLSVAYSSFLFT 252
H+ +V L Q + E++ + + E ++ + + + L V ++
Sbjct: 573 -HASGDVVGLKIQLE-KAEVEAQQMREAKMRAETNQAQVDEILKKRTAELEVNATALQKA 630
Query: 253 KSILDALE 260
K+++D LE
Sbjct: 631 KAVIDELE 638
>U29380-16|AAS60254.1| 761|Caenorhabditis elegans Zygote defective:
embryonic lethalprotein 12, isoform c protein.
Length = 761
Score = 30.7 bits (66), Expect = 1.5
Identities = 27/128 (21%), Positives = 57/128 (44%), Gaps = 12/128 (9%)
Query: 136 EPINYLIPMTAEIMR---NHGVYDEKKLFGITEIDAIRSQCLYATENNLKANDCYVPVIG 192
+ + L P+ E++ +GV +E+KLF +I+ ++ Q EN LK +
Sbjct: 520 QELESLEPLKGELITLKSKNGVLEEEKLFATKQIEELQQQIEDLQENLLKNQE------- 572
Query: 193 GHSDKTIVPLLSQAKPTVEMKEKDLEEFTIKLRNCDGMITKAKRGCIPNLSVAYSSFLFT 252
H+ +V L Q + E++ + + E ++ + + + L V ++
Sbjct: 573 -HASGDVVGLKIQLE-KAEVEAQQMREAKMRAETNQAQVDEILKKRTAELEVNATALQKA 630
Query: 253 KSILDALE 260
K+++D LE
Sbjct: 631 KAVIDELE 638
>U29380-15|AAS60253.1| 777|Caenorhabditis elegans Zygote defective:
embryonic lethalprotein 12, isoform b protein.
Length = 777
Score = 30.7 bits (66), Expect = 1.5
Identities = 27/128 (21%), Positives = 57/128 (44%), Gaps = 12/128 (9%)
Query: 136 EPINYLIPMTAEIMR---NHGVYDEKKLFGITEIDAIRSQCLYATENNLKANDCYVPVIG 192
+ + L P+ E++ +GV +E+KLF +I+ ++ Q EN LK +
Sbjct: 520 QELESLEPLKGELITLKSKNGVLEEEKLFATKQIEELQQQIEDLQENLLKNQE------- 572
Query: 193 GHSDKTIVPLLSQAKPTVEMKEKDLEEFTIKLRNCDGMITKAKRGCIPNLSVAYSSFLFT 252
H+ +V L Q + E++ + + E ++ + + + L V ++
Sbjct: 573 -HASGDVVGLKIQLE-KAEVEAQQMREAKMRAETNQAQVDEILKKRTAELEVNATALQKA 630
Query: 253 KSILDALE 260
K+++D LE
Sbjct: 631 KAVIDELE 638
>AY487140-1|AAR32790.1| 733|Caenorhabditis elegans centrosome
attachment protein A protein.
Length = 733
Score = 30.7 bits (66), Expect = 1.5
Identities = 27/128 (21%), Positives = 57/128 (44%), Gaps = 12/128 (9%)
Query: 136 EPINYLIPMTAEIMR---NHGVYDEKKLFGITEIDAIRSQCLYATENNLKANDCYVPVIG 192
+ + L P+ E++ +GV +E+KLF +I+ ++ Q EN LK +
Sbjct: 517 QELESLEPLKGELITLKSKNGVLEEEKLFATKQIEELQQQIEDLQENLLKNQE------- 569
Query: 193 GHSDKTIVPLLSQAKPTVEMKEKDLEEFTIKLRNCDGMITKAKRGCIPNLSVAYSSFLFT 252
H+ +V L Q + E++ + + E ++ + + + L V ++
Sbjct: 570 -HASGDVVGLKIQLE-KAEVEAQQMREAKMRAETNQAQVDEILKKRTAELEVNATALQKA 627
Query: 253 KSILDALE 260
K+++D LE
Sbjct: 628 KAVIDELE 635
>Z83230-4|CAB05744.1| 275|Caenorhabditis elegans Hypothetical
protein F56A8.4 protein.
Length = 275
Score = 28.7 bits (61), Expect = 6.0
Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 251 FTKSILDALEGSPAKIHAFVDNNDFGTSYFSSLVNLDKNG-VKEMVRYSEFSKFEC--DL 307
FT S L+A KI ++ + NLDKNG ++ +V Y +++K + DL
Sbjct: 155 FTTSSLEAWNPKYLKIKTPYFSSWMTNLFIQDCCNLDKNGKLRRIVFYGKYNKVQILEDL 214
Query: 308 IEKSLQQ-LRKDVSKGRKILE 327
K ++ R+++ G K L+
Sbjct: 215 NSKRFEKGRRQEIYPGPKPLD 235
>U64862-7|AAB52622.1| 374|Caenorhabditis elegans Hypothetical
protein ZC8.1 protein.
Length = 374
Score = 28.7 bits (61), Expect = 6.0
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 241 NLSVAYSSFLFTKSILDALEGSPAKIH-AFVDNNDFGTSYFSSLVNLDKNGVKEMVR 296
N+S +SFL K + + L G+ A +H A V + S+ N + NG K++++
Sbjct: 49 NISYIKASFLDDKVLENILNGASAVVHLAAVGHTGLIAGDRKSVHNFNVNGTKQLIK 105
>AF106587-1|AAC78226.1| 849|Caenorhabditis elegans Msh (muts
homolog) family protein 2 protein.
Length = 849
Score = 28.7 bits (61), Expect = 6.0
Identities = 18/62 (29%), Positives = 26/62 (41%), Gaps = 1/62 (1%)
Query: 141 LIPMTAEIMRNHGVYDEKKLFGITEIDAI-RSQCLYATENNLKANDCYVPVIGGHSDKTI 199
LIP A+++ V+ F T R L L+ C PVI G+S+K
Sbjct: 563 LIPAMAQLIATLDVFVSLSTFAATSSGIYTRPNLLPLGSKRLELKQCRHPVIEGNSEKPF 622
Query: 200 VP 201
+P
Sbjct: 623 IP 624
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.318 0.135 0.377
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,388,524
Number of Sequences: 27539
Number of extensions: 305655
Number of successful extensions: 751
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 748
Number of HSP's gapped (non-prelim): 13
length of query: 329
length of database: 12,573,161
effective HSP length: 82
effective length of query: 247
effective length of database: 10,314,963
effective search space: 2547795861
effective search space used: 2547795861
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 60 (28.3 bits)
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