Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000993-TA|BGIBMGA000993-PA|IPR009003|Peptidase,
trypsin-like serine and cysteine
(443 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC13C5.07 |rad32|mre11|Rad32 nuclease|Schizosaccharomyces pomb... 30 0.75
SPCC962.03c |cut15||karyopherin Cut15|Schizosaccharomyces pombe|... 30 0.75
SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces pom... 30 0.75
SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr 3|||Ma... 29 1.3
SPBC3D6.04c |mad1||mitotic spindle checkpoint protein Mad1|Schiz... 29 1.7
SPAC27F1.04c |nuf2||spindle pole body protein Nuf2|Schizosacchar... 29 1.7
SPAC4G9.15 |||ketoreductase |Schizosaccharomyces pombe|chr 1|||M... 28 3.0
SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit Psm3|Sch... 28 3.0
SPAC8C9.07 |||rRNA processing protein Fyv7 |Schizosaccharomyces ... 28 3.0
SPBC337.06c |cwf15||complexed with Cdc5 protein Cwf15 |Schizosac... 27 4.0
SPCP1E11.08 |||ribosome biogenesis protein Nsa2 |Schizosaccharom... 27 4.0
SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|ch... 27 4.0
SPCC962.02c |bir1|cut17, pbh1, SPCP31B10.10c|survivin homolog|Sc... 27 4.0
SPBC19C7.10 |||transcription factor |Schizosaccharomyces pombe|c... 27 4.0
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 27 5.3
SPBC4F6.13c |||WD repeat/BOP1NT protein|Schizosaccharomyces pomb... 27 5.3
SPBC31E1.05 |gle1||RNA export factor Gle1 |Schizosaccharomyces p... 27 7.0
SPBC16A3.08c |||nuclear telomere cap complex subunit |Schizosacc... 27 7.0
SPBC887.03c |noc3||Noc2p-Noc3p complex subunit Noc3 |Schizosacch... 27 7.0
SPAC31G5.18c |||ubiquitin family, human C1ORF55 related|Schizosa... 26 9.2
SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo... 26 9.2
SPAC12G12.07c |||conserved fungal protein|Schizosaccharomyces po... 26 9.2
SPBC1E8.03c |||conserved fungal protein|Schizosaccharomyces pomb... 26 9.2
SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces... 26 9.2
SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces pom... 26 9.2
SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharom... 26 9.2
>SPAC13C5.07 |rad32|mre11|Rad32 nuclease|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 649
Score = 29.9 bits (64), Expect = 0.75
Identities = 30/147 (20%), Positives = 58/147 (39%), Gaps = 6/147 (4%)
Query: 275 KCHEKECSKHCVSFHKDVKTEQNKPTLTARI--DYPK-STEKTFENITATSALPET---V 328
+C E + +K K TE+N + I D PK ST K + + ET +
Sbjct: 478 ECVETQLNKQINLLVKKRVTEENLEQEISSIINDLPKISTTKRKDYEELPEEVSETSINI 537
Query: 329 TEEGEIXXXXXXXXXXXXXXXXXXXXXXLPTSEARATTKTSNQKDEIRADSTENLRNSRK 388
E + + + + A K +N++ E+ + T+ + +
Sbjct: 538 AEHTPVLKHTSSLLDHHSPLATSSSEHEMEATPSPALLKKTNKRRELPSSLTKKNTRTPQ 597
Query: 389 RLEHVEEEAKRKVNVEAQKEDKDHKET 415
R + V++ RK++ +K DK+ + T
Sbjct: 598 RSKEVKKVPARKLSQSTKKSDKNTQST 624
>SPCC962.03c |cut15||karyopherin Cut15|Schizosaccharomyces pombe|chr
3|||Manual
Length = 542
Score = 29.9 bits (64), Expect = 0.75
Identities = 17/57 (29%), Positives = 27/57 (47%)
Query: 367 KTSNQKDEIRADSTENLRNSRKRLEHVEEEAKRKVNVEAQKEDKDHKETKIVKLSSA 423
+ Q+ EIR E N R+ L V+E A+ + +E KE+ E ++ L A
Sbjct: 30 RRETQQIEIRKQKREENLNKRRNLVDVQEPAEETIPLEQDKENDLELELQLPDLLKA 86
>SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 569
Score = 29.9 bits (64), Expect = 0.75
Identities = 14/63 (22%), Positives = 28/63 (44%)
Query: 360 SEARATTKTSNQKDEIRADSTENLRNSRKRLEHVEEEAKRKVNVEAQKEDKDHKETKIVK 419
+E++ + + D I D E +S++ + VE+ + N + K+D K K
Sbjct: 487 TESKEADVKAKETDSIEVDDKEEKTDSKETADKVEQTDSKDTNEKPAKDDNKEANEKAEK 546
Query: 420 LSS 422
+ S
Sbjct: 547 VDS 549
Score = 27.1 bits (57), Expect = 5.3
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Query: 360 SEARATTKTSNQKDEIRADSTENLRNSRKRLEHVEEEAKRKVNVEAQKEDKDHKETKI 417
S+ T + S + + ADS NL E E+E+K + N + +D + K+TKI
Sbjct: 391 SDVSDTAEISEKTEAKNADSEANLEEKSDVGE--EKESKDENNKASLHKDVEEKDTKI 446
>SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 630
Score = 29.1 bits (62), Expect = 1.3
Identities = 26/111 (23%), Positives = 49/111 (44%), Gaps = 9/111 (8%)
Query: 167 FILIFIKESGNFSDDKVLKRTSVELQIPST-KEICGARFTENSMVCAVENDEYKNNTVQD 225
F +I I + + +DD L V+ Q S +E A + +++C V +D Y V
Sbjct: 36 FPIISIPSNPDSNDDVSL--VLVDTQSDSNEREYLAAEIKKANVICLVYSDNYSYERVSI 93
Query: 226 F------CLGNSGGPLICHNEVVGVQTYAELNCNPPYLYQLLNQWENFISC 270
F LG + ++C N+ + Y L+ + L+N+++ +C
Sbjct: 94 FWLPYFRSLGVNVPIVLCENKSEDLDNYQGLHTIEHEMIPLINEFKEIEAC 144
>SPBC3D6.04c |mad1||mitotic spindle checkpoint protein
Mad1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 689
Score = 28.7 bits (61), Expect = 1.7
Identities = 14/57 (24%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 370 NQKDEIRADSTENLRNSRKRLEHVEEEAKRKVNVEAQKEDKDHKETKIVKLSSAADR 426
N + ++ E L+ +++ E +E+ + NVE KE+K+ E+K+ + D+
Sbjct: 236 NAEQRLQISELEKLKAAQE--ERIEKLSSNNRNVEILKEEKNDLESKLYRFEEYRDK 290
>SPAC27F1.04c |nuf2||spindle pole body protein
Nuf2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 441
Score = 28.7 bits (61), Expect = 1.7
Identities = 13/51 (25%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 369 SNQKDEIRADST-ENLRNSRKRLEHVEEEAKRKVNVEAQKEDKDHKETKIV 418
+ +K E R + + L N++++LEH + +K+ Q+ D +E K++
Sbjct: 325 NKKKLEFRKEQLLKQLSNAQEKLEHEQHSRNQKLEAAKQRMDNIREEYKVI 375
>SPAC4G9.15 |||ketoreductase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 341
Score = 27.9 bits (59), Expect = 3.0
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 290 KDVKTEQNKPTLTARIDYPKSTEKTFENI 318
K+++T T T IDY K+T +TFE +
Sbjct: 99 KELETVAKVKTRTIAIDYTKTTAETFEKL 127
>SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit
Psm3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1194
Score = 27.9 bits (59), Expect = 3.0
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 5/49 (10%)
Query: 381 ENLRNSRKRLEHVEEEAKRKVNVEAQKEDKDHKETKIVKLSSAADRNSA 429
ENL + RK L EEAK K ++E K+D E L + DRN++
Sbjct: 463 ENLTDKRKSLWR--EEAKLKSSIENVKDDLSRSEK---ALGTTMDRNTS 506
>SPAC8C9.07 |||rRNA processing protein Fyv7 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 144
Score = 27.9 bits (59), Expect = 3.0
Identities = 13/44 (29%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 387 RKRLEHVEEEAKRKVNVEAQKEDKDHKETKIVKLSSAADRNSAI 430
++R++ +E+AK + +E +K+ KD ++T+ + LS R I
Sbjct: 86 KRRIQQEKEDAKVQKRLEIEKKQKDREQTRNM-LSKKTKRGQPI 128
>SPBC337.06c |cwf15||complexed with Cdc5 protein Cwf15
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 265
Score = 27.5 bits (58), Expect = 4.0
Identities = 16/68 (23%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Query: 359 TSEARATTKTSNQKDEIRA--DSTENLRNSRKRLEHVEEEAKRKVNVEAQKEDKDHKETK 416
+S + ++ + S+ +DE + EN++ RKR + ++EE R + E ++ +
Sbjct: 151 SSNSESSDEESDSEDETQQLLRELENIKQERKREQMLQEEKNRALEQEKREREIAFGNEL 210
Query: 417 IVKLSSAA 424
+ K SS +
Sbjct: 211 LNKASSGS 218
>SPCP1E11.08 |||ribosome biogenesis protein Nsa2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 260
Score = 27.5 bits (58), Expect = 4.0
Identities = 12/40 (30%), Positives = 20/40 (50%)
Query: 395 EEAKRKVNVEAQKEDKDHKETKIVKLSSAADRNSAIHCYL 434
+E +RK ++ +K K H+E + S A A+ YL
Sbjct: 51 QEKRRKEKIQMKKTIKQHEERNATQRGSDAQTQGAVPTYL 90
>SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 750
Score = 27.5 bits (58), Expect = 4.0
Identities = 13/49 (26%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 381 ENLRNSRKRLEHVEEEAKRKVNVEAQKEDKDH-KETKIVKLSSAADRNS 428
+NL +S R EH+++ K N +++ +H + + + + SS+ + NS
Sbjct: 647 KNLEDSTARYEHLQKSFKNVFNQLRKQQPSNHGRNSSVSRSSSSVEVNS 695
>SPCC962.02c |bir1|cut17, pbh1, SPCP31B10.10c|survivin
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 997
Score = 27.5 bits (58), Expect = 4.0
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Query: 246 TYAELNCNPPYLYQLLNQWENFISCGTDDKCHEKECSKHCVSFHK--DVKTEQNKPTLT 302
T+ E + N P L NQ ++ T DK EKE + + K + TE +K +L+
Sbjct: 747 TFQEDDINSPKLQSKNNQTVEAVNTETSDKLQEKEANHELENIEKIEEKLTEVDKVSLS 805
>SPBC19C7.10 |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 432
Score = 27.5 bits (58), Expect = 4.0
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Query: 358 PTSEARATTKTSNQKDEIRADSTENLRNSRKR-LEHVEEEAKRKVNVEAQKEDKD-HKET 415
PT++ ++ T + A +T R +R+R EH+E K + + ++EDK+ H E
Sbjct: 150 PTAQ-KSETSEGEPESSTSATTTSVARRTRQRLAEHLENSKKTILQHDNKEEDKEIHSEE 208
Query: 416 KIVK 419
K
Sbjct: 209 NETK 212
Score = 26.2 bits (55), Expect = 9.2
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 4/55 (7%)
Query: 358 PTSEARATTKTSNQKDEIRADSTENLRNSRKR-LEHVEEEAKRKVNVEAQKEDKD 411
P S ATT + ++ R E+L NS+K L+H +E ++++ E + E KD
Sbjct: 162 PESSTSATTTSVARRTRQRL--AEHLENSKKTILQHDNKEEDKEIHSE-ENETKD 213
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 27.1 bits (57), Expect = 5.3
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 388 KRLEHVEEEAKRKVNVEAQK-EDKDHKETKIVKLSSAAD 425
K LE +EEE KRK E +K +K+ K K +L A +
Sbjct: 571 KLLEEIEEENKRKQERELKKIREKEKKRDKKKQLKLAKE 609
Score = 27.1 bits (57), Expect = 5.3
Identities = 13/36 (36%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Query: 384 RNSRKRLEHVEEEAKRKVNVEAQKEDKDH--KETKI 417
R R++L+ EEE +R+ +E + E+K+ +E KI
Sbjct: 705 RKRREKLDKEEEERRRRELLEKESEEKERRLREAKI 740
>SPBC4F6.13c |||WD repeat/BOP1NT protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 736
Score = 27.1 bits (57), Expect = 5.3
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Query: 278 EKECSKHCVSFHKDVKTEQNKPTLTARIDYPKSTEKTFENITATSALPETVTEEGE 333
E E S H SF KDV ++ P+LTA + + E + E+ +T L E+ +
Sbjct: 37 ETESSSHEPSFKKDV--DEEIPSLTAELSEEEEGEYSSESGRSTPELSPDDFEDAD 90
>SPBC31E1.05 |gle1||RNA export factor Gle1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 480
Score = 26.6 bits (56), Expect = 7.0
Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 4/50 (8%)
Query: 367 KTSNQKDEIRA-DSTENLRNSRKRLEHVEEEAKRKVNVEAQKEDKDHKET 415
K +K+ IR + ++ N ++RL+ + +AKRK E + +K KET
Sbjct: 144 KEKKEKERIRLIEEQKHKENEQRRLKQEQIDAKRK---EEEAREKRMKET 190
>SPBC16A3.08c |||nuclear telomere cap complex subunit
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 284
Score = 26.6 bits (56), Expect = 7.0
Identities = 11/38 (28%), Positives = 23/38 (60%)
Query: 295 EQNKPTLTARIDYPKSTEKTFENITATSALPETVTEEG 332
E ++ + T R+D K+TE+ + ++ ++A P+ EG
Sbjct: 121 EFDRHSQTGRVDTKKATERGWGDLVNSAANPDVAENEG 158
>SPBC887.03c |noc3||Noc2p-Noc3p complex subunit Noc3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 747
Score = 26.6 bits (56), Expect = 7.0
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 372 KDEIRADSTENLRNSRKRLEHVEEEAKRKVNVEAQKEDKDHKETKIV 418
KDE D T N + +K L ++ ++A RK E +K ++ KE V
Sbjct: 431 KDEAWQDDTTNFKKRKKDLPYLTKKA-RKNYKETKKITQEMKEADAV 476
>SPAC31G5.18c |||ubiquitin family, human C1ORF55
related|Schizosaccharomyces pombe|chr 1|||Manual
Length = 263
Score = 26.2 bits (55), Expect = 9.2
Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 2/72 (2%)
Query: 357 LPTSEARATTKTSNQK--DEIRADSTENLRNSRKRLEHVEEEAKRKVNVEAQKEDKDHKE 414
L + R + K + Q+ D R L R+ E E AK+ A+KE K K
Sbjct: 92 LRAAGGRMSKKRNEQENQDSCRDLDGNRLGTIRQAKELSEYLAKKPAETRAKKEAKKQKL 151
Query: 415 TKIVKLSSAADR 426
K++ S++ R
Sbjct: 152 NKVLAADSSSSR 163
>SPAC56F8.03 |||translation initiation factor IF2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1079
Score = 26.2 bits (55), Expect = 9.2
Identities = 13/49 (26%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 367 KTSNQKDEIRADSTE-NLRNSRKRLEHVEEEAKRKVNVEAQKEDKDHKE 414
K + +++E R E + KRL VEE K + ++ +++++ KE
Sbjct: 257 KRAREEEEQRIREEEARIAEEEKRLAEVEEARKEEARLKKKEKERKKKE 305
>SPAC12G12.07c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 412
Score = 26.2 bits (55), Expect = 9.2
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 364 ATTKTSNQKDEI--RADSTENLRNSRKRLEHVEEEAKRKVNVEAQ-KEDKDHKETKIVKL 420
A T N+ E+ + D+T KR E AKRK +EAQ +E D + ++ L
Sbjct: 71 AVLTTLNELKELLSQIDATRIRDEKHKRQFEATENAKRKEEIEAQYREGYDTAQKQVSSL 130
>SPBC1E8.03c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 477
Score = 26.2 bits (55), Expect = 9.2
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 357 LPTSEARATTKTSNQKDEIRADSTENLRNS 386
LP+ + RA+T TS + E R+D E L +
Sbjct: 64 LPSLDPRASTTTSQKFQEYRSDFLEKLETA 93
>SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1526
Score = 26.2 bits (55), Expect = 9.2
Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 5/68 (7%)
Query: 360 SEARATTKTSNQKDEIRADSTENLRNSRKRLEHVEEEAKRKVNVEAQKEDKDHKETKIVK 419
S+ T + +K I + E LR+ + LE +KRK+ VE QK ++ K T+ ++
Sbjct: 1265 SQLGKTFEDEKRKALIASRDNEELRSLKSELE-----SKRKLEVEYQKVLEEVKTTRSLR 1319
Query: 420 LSSAADRN 427
RN
Sbjct: 1320 SEVTLLRN 1327
>SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces
pombe|chr 1||Partial|Manual
Length = 1887
Score = 26.2 bits (55), Expect = 9.2
Identities = 12/57 (21%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 371 QKDEIRADSTENLRNSRKRLEHVEEEAKRKVNVEAQKEDKDHKETKIVKLSSAADRN 427
+K++ R + + N +KR + V++ N + ++KD+ E + ++ +A ++N
Sbjct: 327 EKNQQRREQQDKGEN-KKRQDDVDQATDNNTNTILEDDEKDNDEEEEEEIVNAREKN 382
>SPBCPT2R1.08c |tlh2||RecQ type DNA helicase
Tlh1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1919
Score = 26.2 bits (55), Expect = 9.2
Identities = 12/57 (21%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 371 QKDEIRADSTENLRNSRKRLEHVEEEAKRKVNVEAQKEDKDHKETKIVKLSSAADRN 427
+K++ R + + N +KR + V++ N + ++KD+ E + ++ +A ++N
Sbjct: 327 EKNQQRREQQDKGEN-KKRQDDVDQATDNNTNTILEDDEKDNDEEEEEEIVNAREKN 382
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.132 0.393
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,939,589
Number of Sequences: 5004
Number of extensions: 79782
Number of successful extensions: 313
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 293
Number of HSP's gapped (non-prelim): 32
length of query: 443
length of database: 2,362,478
effective HSP length: 75
effective length of query: 368
effective length of database: 1,987,178
effective search space: 731281504
effective search space used: 731281504
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 55 (26.2 bits)
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