GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000993-TA|BGIBMGA000993-PA|IPR009003|Peptidase,
trypsin-like serine and cysteine
         (443 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    26   0.55 
DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex det...    25   1.7  
DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex det...    25   1.7  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    23   3.9  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    23   3.9  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    23   5.1  

>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 26.2 bits (55), Expect = 0.55
 Identities = 21/88 (23%), Positives = 34/88 (38%)

Query: 235 LICHNEVVGVQTYAELNCNPPYLYQLLNQWENFISCGTDDKCHEKECSKHCVSFHKDVKT 294
           ++   E+ GV TY     N    Y       N I+C    +  E+   +   SF + V  
Sbjct: 249 ILAKKEIKGVPTYLIKWKNWDLKYNTWEPISNLINCSDILEEFERNRLQLLESFKRKVNF 308

Query: 295 EQNKPTLTARIDYPKSTEKTFENITATS 322
             N   +   ++Y K   KT  +I+  S
Sbjct: 309 YPNNQDIEKFLNYLKRGGKTLTSISVES 336


>DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 24.6 bits (51), Expect = 1.7
 Identities = 15/56 (26%), Positives = 25/56 (44%), Gaps = 4/56 (7%)

Query: 363 RATTKTSNQKDEIRADSTENLRNSRKR----LEHVEEEAKRKVNVEAQKEDKDHKE 414
           R   K  N+K+++  + T   RNSR R      +  E   RK    +++  +D  E
Sbjct: 16  RRYEKLHNEKEKLLEERTNRKRNSRSREREQNSYKNEREYRKYRETSKERSRDRTE 71


>DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 24.6 bits (51), Expect = 1.7
 Identities = 15/56 (26%), Positives = 25/56 (44%), Gaps = 4/56 (7%)

Query: 363 RATTKTSNQKDEIRADSTENLRNSRKR----LEHVEEEAKRKVNVEAQKEDKDHKE 414
           R   K  N+K+++  + T   RNSR R      +  E   RK    +++  +D  E
Sbjct: 16  RRYEKLHNEKEKLLEERTNRKRNSRSREREQNSYKNEREYRKYRETSKERSRDRAE 71


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 23.4 bits (48), Expect = 3.9
 Identities = 6/15 (40%), Positives = 12/15 (80%)

Query: 427 NSAIHCYLFGLMFWH 441
           +S++  Y FG++FW+
Sbjct: 771 DSSVDVYAFGILFWY 785


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 23.4 bits (48), Expect = 3.9
 Identities = 6/15 (40%), Positives = 12/15 (80%)

Query: 427 NSAIHCYLFGLMFWH 441
           +S++  Y FG++FW+
Sbjct: 809 DSSVDVYAFGILFWY 823


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 23.0 bits (47), Expect = 5.1
 Identities = 13/40 (32%), Positives = 17/40 (42%)

Query: 63  IRLDWLVTSSIDVSSPDNNVVGFPTKTLLARVGAVTIDTN 102
           I+LD  +    DV   D  V+  P K +       TID N
Sbjct: 342 IQLDDGIDILDDVKCEDERVISIPDKEITVPSNEETIDIN 381


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.318    0.132    0.393 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,280
Number of Sequences: 429
Number of extensions: 4754
Number of successful extensions: 18
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 11
Number of HSP's gapped (non-prelim): 7
length of query: 443
length of database: 140,377
effective HSP length: 60
effective length of query: 383
effective length of database: 114,637
effective search space: 43905971
effective search space used: 43905971
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 45 (22.2 bits)