Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000992-TA|BGIBMGA000992-PA|undefined
(429 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40 |Schi... 36 0.014
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 31 0.31
SPCC330.01c |rhp16|SPCC613.13c, rad16|Rad16 homolog Rhp16|Schizo... 31 0.31
SPBC26H8.09c |snf59||SWI/SNF complex subunit Snf59|Schizosacchar... 30 0.54
SPAC4A8.09c |cwf21||complexed with Cdc5 protein Cwf21 |Schizosac... 30 0.72
SPAC22E12.01 ||SPAC890.09|triose phosphate transporter |Schizosa... 30 0.72
SPAC26A3.12c |dhp1||5'-3' exoribonuclease Dhp1 |Schizosaccharomy... 29 0.95
SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein Rad50|Schizos... 29 1.7
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 29 1.7
SPAC926.09c |fas1||fatty acid synthase beta subunit Fas1|Schizos... 28 2.2
SPCC162.01c |||RNA-binding protein |Schizosaccharomyces pombe|ch... 28 2.2
SPBC4F6.10 |vps901|vps9a|guanyl-nucleotide exchange factor Vps90... 28 2.9
SPAC869.05c |||sulfate transporter |Schizosaccharomyces pombe|ch... 27 3.8
SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces pom... 27 3.8
SPAC6G9.10c |sen1||ATP-dependent 5' to 3' DNA/RNA helicase Sen1|... 27 5.1
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 27 6.7
SPAC16.02c |srp2||mRNA export factor Srp2|Schizosaccharomyces po... 27 6.7
SPAC6G10.02c |tea3||cell end marker Tea3|Schizosaccharomyces pom... 27 6.7
SPBC947.07 |||ribosome biogenesis protein Rrp14-C|Schizosaccharo... 27 6.7
SPBC17D11.01 |nep1||nedd8 protease Nep1|Schizosaccharomyces pomb... 27 6.7
SPCC1322.09 |||conserved fungal protein|Schizosaccharomyces pomb... 26 8.8
SPCC1235.01 ||SPCC320.02c|sequence orphan|Schizosaccharomyces po... 26 8.8
SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit Psm3|Sch... 26 8.8
>SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 451
Score = 35.5 bits (78), Expect = 0.014
Identities = 37/210 (17%), Positives = 80/210 (38%), Gaps = 7/210 (3%)
Query: 20 SGGSASVLKEALEEHLKDVAHNEG-AESIKHDKQKGEKVHQLESQINDSHKNHYSKANDE 78
S S+S + + E++ + ++ +ES D ES+ + + S ++
Sbjct: 166 SSSSSSESESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDSESESSSEGSDSSSSSSSS 225
Query: 79 TKYLKKEHDTKSATDSDAYKGHNSSQDKAEDSHATGYKRXXXXXXXXXXFQNSYHKDESS 138
E + S++ SD+ + +SS+D S ++ + +S +D+SS
Sbjct: 226 ESESSSEDNDSSSSSSDS-ESESSSEDSDSSSSSSDSESESSSKDSDSSSNSSDSEDDSS 284
Query: 139 NKSTFFDDLNDEGDQAAYNSRLNSHDNQGGRSYQGSHNNGQEYVXXXXXXXXXXXXXXXX 198
+ S+ D E +S +S D+ S + ++N
Sbjct: 285 SDSS---DSESESSSEDSDSTSSSSDSDSSSSSEDGNSNTDTTTSGEVSAQSSTNSTSSE 341
Query: 199 XKQNLRHDYGKKYILDDALNHNKYRNDHNS 228
+++ + K I D +L K+ +D +S
Sbjct: 342 ESTSVKDEDSSK-IHDKSLK-RKHEDDESS 369
Score = 33.9 bits (74), Expect = 0.044
Identities = 27/160 (16%), Positives = 55/160 (34%), Gaps = 4/160 (2%)
Query: 21 GGSASVLKEALEEHLKDVAHNEGAESIKHDKQKGEKVHQLESQINDSHKNHYSKANDETK 80
G +S + E ++ + S + + + S +DS S+ +D +
Sbjct: 161 GSDSSSSSSSSESESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDSESESSSEGSDSSS 220
Query: 81 YLKKEHDTKSATDSDAYKGHNSSQDKAEDSHATGYKRXXXXXXXXXXFQNSYHKDESSNK 140
S+ D+D+ +SS +E ++ +S D SSN
Sbjct: 221 SSSSSESESSSEDNDS----SSSSSDSESESSSEDSDSSSSSSDSESESSSKDSDSSSNS 276
Query: 141 STFFDDLNDEGDQAAYNSRLNSHDNQGGRSYQGSHNNGQE 180
S DD + + + S D+ S S ++ ++
Sbjct: 277 SDSEDDSSSDSSDSESESSSEDSDSTSSSSDSDSSSSSED 316
Score = 32.7 bits (71), Expect = 0.10
Identities = 27/141 (19%), Positives = 55/141 (39%), Gaps = 5/141 (3%)
Query: 41 NEGAESIKHDKQKGEKVHQLESQINDSHKNHYSKANDETKYLKKEHDTKSATDSDAYKGH 100
N+ ++ I EK H + S ++ E + S++ SD+ +
Sbjct: 80 NDDSQKISKKGAPPEKAHSSSEASGSGSSSDESDSSSSESESSSEDNDSSSSSSDS-ESE 138
Query: 101 NSSQDKAEDSHATGYKRXXXXXXXXXXFQNSYHKDESSNK----STFFDDLNDEGDQAAY 156
+SS+D S ++ + +S + ESS++ S+ D E
Sbjct: 139 SSSEDSDSSSSSSDSESESSSEGSDSSSSSSSSESESSSEDNDSSSSSSDSESESSSEDS 198
Query: 157 NSRLNSHDNQGGRSYQGSHNN 177
+S +S D++ S +GS ++
Sbjct: 199 DSSSSSSDSESESSSEGSDSS 219
Score = 31.9 bits (69), Expect = 0.18
Identities = 22/119 (18%), Positives = 45/119 (37%), Gaps = 3/119 (2%)
Query: 61 ESQINDSHKNHYSKANDETKYLKKEHDTKSATDSDAYKGHNSSQDKAEDSHATGYKRXXX 120
ES + S S+ ND + S+ DSD+ +SS D +S + G
Sbjct: 111 ESDSSSSESESSSEDNDSSSSSSDSESESSSEDSDS---SSSSSDSESESSSEGSDSSSS 167
Query: 121 XXXXXXXFQNSYHKDESSNKSTFFDDLNDEGDQAAYNSRLNSHDNQGGRSYQGSHNNGQ 179
+ + SS+ + + +++ D ++ +S S + G S ++ +
Sbjct: 168 SSSSESESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDSESESSSEGSDSSSSSSSSE 226
Score = 30.3 bits (65), Expect = 0.54
Identities = 30/163 (18%), Positives = 66/163 (40%), Gaps = 6/163 (3%)
Query: 20 SGGSASVLKEALEEHLKDVAHNEG-AESIKHDKQKGEKVHQLESQINDSHKNHYSKANDE 78
S S+S + + E++ + ++ +ES D ES+ + + S ++
Sbjct: 112 SDSSSSESESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDSESESSSEGSDSSSSSSSS 171
Query: 79 TKYLKKEHDTKSATDSDAYKGHNSSQDKAEDSHATGYKRXXXXXXXXXXFQNSYHKDESS 138
E + S++ SD+ + +SS+D S ++ + +S + ESS
Sbjct: 172 ESESSSEDNDSSSSSSDS-ESESSSEDSDSSSSSSDSESESSSEGSDSSSSSSSSESESS 230
Query: 139 NK----STFFDDLNDEGDQAAYNSRLNSHDNQGGRSYQGSHNN 177
++ S+ D E +S +S D++ S + S ++
Sbjct: 231 SEDNDSSSSSSDSESESSSEDSDSSSSSSDSESESSSKDSDSS 273
Score = 28.7 bits (61), Expect = 1.7
Identities = 26/144 (18%), Positives = 48/144 (33%), Gaps = 6/144 (4%)
Query: 34 HLKDVAHNEGAESIKHDKQKGEKVHQLESQINDSHKNHYSKANDETKYLKKEHDTKSATD 93
H A G+ S + D E + S+ NDS S ++D E S++
Sbjct: 97 HSSSEASGSGSSSDESDSSSSES--ESSSEDNDSS----SSSSDSESESSSEDSDSSSSS 150
Query: 94 SDAYKGHNSSQDKAEDSHATGYKRXXXXXXXXXXFQNSYHKDESSNKSTFFDDLNDEGDQ 153
SD+ +S + S ++ + + SS S +D +
Sbjct: 151 SDSESESSSEGSDSSSSSSSSESESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDSESE 210
Query: 154 AAYNSRLNSHDNQGGRSYQGSHNN 177
++ +S + S S +N
Sbjct: 211 SSSEGSDSSSSSSSSESESSSEDN 234
Score = 28.7 bits (61), Expect = 1.7
Identities = 27/160 (16%), Positives = 57/160 (35%), Gaps = 4/160 (2%)
Query: 20 SGGSASVLKEALEEHLKDVAHNEGAESIKH-DKQKGEKVHQLESQINDSHKNHYSKANDE 78
SG S+ + E N+ + S + + + S +DS S+ +D
Sbjct: 105 SGSSSDESDSSSSESESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDSESESSSEGSDS 164
Query: 79 TKYLKKEHDTKSATDSDAYKGHNSSQDK--AEDSHATGYKRXXXXXXXXXXFQNSYHKDE 136
+ S+ D+D+ + S+ + +EDS ++ +S
Sbjct: 165 SSSSSSSESESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDSESESSSEGSDSSSSSSS 224
Query: 137 SSNKSTFFDDLNDEGDQAAYNSRLNSHDNQGGRSYQGSHN 176
S ++S+ +D + + S +S D+ S S +
Sbjct: 225 SESESS-SEDNDSSSSSSDSESESSSEDSDSSSSSSDSES 263
Score = 28.3 bits (60), Expect = 2.2
Identities = 26/140 (18%), Positives = 51/140 (36%), Gaps = 5/140 (3%)
Query: 44 AESIKHDKQKGEKVHQLESQINDSHKNHYSKANDETKYLKKEHDTKSATDSDAYKGHNSS 103
+ES ES+ + + S ++D E S++ SD+ + +SS
Sbjct: 155 SESSSEGSDSSSSSSSSESESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDS-ESESSS 213
Query: 104 QDKAEDSHATGYKRXXXXXXXXXXFQNSYHKDESSNK----STFFDDLNDEGDQAAYNSR 159
+ S ++ + +S + ESS++ S+ D E +S
Sbjct: 214 EGSDSSSSSSSSESESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDSESESSSKDSDSS 273
Query: 160 LNSHDNQGGRSYQGSHNNGQ 179
NS D++ S S + +
Sbjct: 274 SNSSDSEDDSSSDSSDSESE 293
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 31.1 bits (67), Expect = 0.31
Identities = 20/69 (28%), Positives = 31/69 (44%), Gaps = 3/69 (4%)
Query: 31 LEEHLKDVAHNEGAESIKHDKQKGEKVHQLESQINDSHKNHYSKANDETKYLKKEHDTKS 90
LEEH + H+ G E +H K +K H + + HK K + + K+ H K
Sbjct: 347 LEEH-EGPEHHRGPEDKEHHKGPKDKEHHKGPKDKEHHKGPKDKEHHKGPKDKEHH--KG 403
Query: 91 ATDSDAYKG 99
D + +KG
Sbjct: 404 PKDKEHHKG 412
Score = 27.1 bits (57), Expect = 5.1
Identities = 15/76 (19%), Positives = 33/76 (43%), Gaps = 2/76 (2%)
Query: 36 KDVAHNEGAESIKHDKQKGEKVHQLESQINDSHKNHYSKANDETKYLKKEHDTKSATDSD 95
+D H++G + +H K +K H + + HK K + + K+ H K D +
Sbjct: 360 EDKEHHKGPKDKEHHKGPKDKEHHKGPKDKEHHKGPKDKEHHKGPKDKEHH--KGPKDKE 417
Query: 96 AYKGHNSSQDKAEDSH 111
++G ++ + +
Sbjct: 418 HHQGPKEKHNERPEQN 433
>SPCC330.01c |rhp16|SPCC613.13c, rad16|Rad16 homolog
Rhp16|Schizosaccharomyces pombe|chr 3|||Manual
Length = 963
Score = 31.1 bits (67), Expect = 0.31
Identities = 21/74 (28%), Positives = 29/74 (39%), Gaps = 5/74 (6%)
Query: 85 EHDTKSATDSDAYKGHNSSQDKAEDSHATGYKRXXXXXXXXXXFQNSY---HKDESSNKS 141
+H T + SD SS D E + TG+ + + E SN+S
Sbjct: 178 QHSTPPLSISDTSTHTGSSTDNVEANPNTGFSSARKRSLRSSNLKKKFVPLSSPEESNES 237
Query: 142 TFFDDLNDEGDQAA 155
F DD DE D+ A
Sbjct: 238 EFIDD--DESDEVA 249
>SPBC26H8.09c |snf59||SWI/SNF complex subunit
Snf59|Schizosaccharomyces pombe|chr 2|||Manual
Length = 515
Score = 30.3 bits (65), Expect = 0.54
Identities = 24/135 (17%), Positives = 48/135 (35%), Gaps = 4/135 (2%)
Query: 46 SIKHDKQKGEKVHQLESQINDSHKNHYSKANDETKYLKKEHDTKSATDSDAYKGHNSSQD 105
+++H ++ +++N H+ +N E+ L + + D +++ D
Sbjct: 7 TLEHSDDLNKEESGESNRVNIEEPEHHDNSNKESTNLDDLNMLEEPKYHDNSNKESTNLD 66
Query: 106 KA----EDSHATGYKRXXXXXXXXXXFQNSYHKDESSNKSTFFDDLNDEGDQAAYNSRLN 161
E H K+ + H D S+ +ST DDLN + ++S
Sbjct: 67 DLNMLEEPEHHDNSKKESTNLDDSNMLEEPKHHDNSNKESTNLDDLNMSEEPKHHDSSNK 126
Query: 162 SHDNQGGRSYQGSHN 176
N + S N
Sbjct: 127 ESTNLDNSNMDESEN 141
>SPAC4A8.09c |cwf21||complexed with Cdc5 protein Cwf21
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 293
Score = 29.9 bits (64), Expect = 0.72
Identities = 23/98 (23%), Positives = 41/98 (41%), Gaps = 4/98 (4%)
Query: 47 IKHDKQKGEKVHQ-LESQINDSHKNHYSKANDETKYLKKEHDTKSATDSDAYKGHNSSQD 105
++ +KG+ L+ Q + +SK ND+ L++ D +S+ D D Y S+
Sbjct: 141 LQKSTEKGKNFESILQPQKRKETRGFHSK-NDDDGRLEERDDLRSSVDDDYYDYPRYSER 199
Query: 106 KAEDS--HATGYKRXXXXXXXXXXFQNSYHKDESSNKS 141
K+ +S H Y + + SSN+S
Sbjct: 200 KSLNSKRHVDNYNENRRRHYDSYSSYDELERRRSSNES 237
>SPAC22E12.01 ||SPAC890.09|triose phosphate transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 374
Score = 29.9 bits (64), Expect = 0.72
Identities = 10/19 (52%), Positives = 16/19 (84%)
Query: 4 RCKLYLWLLICITLIISGG 22
R +++ W+L+CITL+IS G
Sbjct: 172 RIEMFDWILLCITLVISAG 190
>SPAC26A3.12c |dhp1||5'-3' exoribonuclease Dhp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 991
Score = 29.5 bits (63), Expect = 0.95
Identities = 13/25 (52%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
Query: 154 AAYNSRLNSHDNQGGRSYQGSHNNG 178
A+YNSR H+ GGRS G ++NG
Sbjct: 937 ASYNSR-GGHEGYGGRSRGGGYSNG 960
>SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein
Rad50|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1290
Score = 28.7 bits (61), Expect = 1.7
Identities = 12/37 (32%), Positives = 22/37 (59%)
Query: 72 YSKANDETKYLKKEHDTKSATDSDAYKGHNSSQDKAE 108
Y+KA D+ K LK++ +T+ D + S +++AE
Sbjct: 183 YAKALDQIKGLKRDQETQVKVDQATLTHYRSDKERAE 219
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 28.7 bits (61), Expect = 1.7
Identities = 16/74 (21%), Positives = 35/74 (47%)
Query: 42 EGAESIKHDKQKGEKVHQLESQINDSHKNHYSKANDETKYLKKEHDTKSATDSDAYKGHN 101
+ E+++ +KQ+ E Q ++ D+ K + N+E + LKKE + + ++ N
Sbjct: 1359 KNCEALEKEKQELETKLQETAKETDTFKQQVNSLNEEVENLKKEVEQANTKNTRLAAAWN 1418
Query: 102 SSQDKAEDSHATGY 115
+ + S T +
Sbjct: 1419 EKCENLKKSSLTRF 1432
>SPAC926.09c |fas1||fatty acid synthase beta subunit
Fas1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2073
Score = 28.3 bits (60), Expect = 2.2
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Query: 27 LKEALEEHLKDVAHNEGAESIKHDKQKGEKVHQLESQINDSHKNHYSK---ANDETK 80
L + E + VA +G + KH + E +L IN++H H+ K A DE K
Sbjct: 1042 LAAVVGEDVGRVAILQGPMAAKHSTKVNEPAKELLDGINETHIQHFIKKFYAGDEKK 1098
>SPCC162.01c |||RNA-binding protein |Schizosaccharomyces pombe|chr
3|||Manual
Length = 244
Score = 28.3 bits (60), Expect = 2.2
Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 8/82 (9%)
Query: 218 NHNKYRNDHNSYDNGKLRDYHEYRVPEVHHHHHDPGYNSQRWENERGWDEEPTWRRDPGW 277
N+ + RN +S G RD +YR E ++ D +S+R+E+ + D P RRD
Sbjct: 12 NYAQGRNYESSRSRGDQRD-RDYR--EYRRNYRDER-SSRRYEDSQRRDYSPARRRDRYE 67
Query: 278 RNEPTWKNDGWR----NEPGWQ 295
R+ + + + R +E WQ
Sbjct: 68 RHRESVREESPRRPVEHERNWQ 89
>SPBC4F6.10 |vps901|vps9a|guanyl-nucleotide exchange factor Vps901
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 537
Score = 27.9 bits (59), Expect = 2.9
Identities = 14/46 (30%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
Query: 138 SNKSTFFDDLNDEGDQA--AYNSRLNSHDNQGGRSYQGSHNNGQEY 181
SN+ DLND D+ AYN +HD Q + + + +Y
Sbjct: 25 SNEEKPLIDLNDSLDEQRNAYNEHCKNHDQQPSQQVRNMEDEANQY 70
>SPAC869.05c |||sulfate transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 840
Score = 27.5 bits (58), Expect = 3.8
Identities = 14/41 (34%), Positives = 16/41 (39%)
Query: 139 NKSTFFDDLNDEGDQAAYNSRLNSHDNQGGRSYQGSHNNGQ 179
NK + DD ND Y R N DN + NN Q
Sbjct: 9 NKFSSEDDYNDGASNKDYPDRFNEFDNSQNDHNDYTQNNAQ 49
>SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 569
Score = 27.5 bits (58), Expect = 3.8
Identities = 16/70 (22%), Positives = 29/70 (41%), Gaps = 1/70 (1%)
Query: 43 GAESIKHDKQKGEKVHQLESQINDSHKNHYSKANDETKYLKKEHDTKSATDSDAYKGHNS 102
G E D+ +H+ + + D+ + ET KE D+ A D D
Sbjct: 421 GEEKESKDENNKASLHK-DVEEKDTKITNEDTGKTETDVKAKETDSIEANDKDEKTDSKE 479
Query: 103 SQDKAEDSHA 112
++DK E++ +
Sbjct: 480 TEDKVEETES 489
>SPAC6G9.10c |sen1||ATP-dependent 5' to 3' DNA/RNA helicase
Sen1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1687
Score = 27.1 bits (57), Expect = 5.1
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 4/59 (6%)
Query: 234 LRDYHEYRVP-EVHHHHHDPGYNSQRWENERGWDEEPTWRRDPGWRNEPTWKNDGWRNE 291
L+DY EY + +H +D + S W + + + P++ DP + P WK D + E
Sbjct: 387 LQDYPEYMLKLRLHSLLYDIAFIS--WSH-KAITKNPSFVFDPSYELSPFWKLDNLQEE 442
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 26.6 bits (56), Expect = 6.7
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 66 DSHKNHYSKANDETKYLKKEHDTKSATDSD 95
+ N S AN+E+ + KE D K+ D D
Sbjct: 4016 EQKSNEQSAANNESDLVSKEDDNKALEDKD 4045
>SPAC16.02c |srp2||mRNA export factor Srp2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 365
Score = 26.6 bits (56), Expect = 6.7
Identities = 21/81 (25%), Positives = 32/81 (39%), Gaps = 2/81 (2%)
Query: 223 RNDHNSYDNGKLRDYHEYRVPEVHHHHHDPGYNSQRWENER-GWDEEPTWRRDPGWRNEP 281
RN+ + Y G RD + + HD Y R + R G DE R D ++
Sbjct: 228 RNNRDEYRRGG-RDEYRRNSRSDYRRPHDDEYRRPRGDEYRPGRDEYRRSRDDGRPSHDD 286
Query: 282 TWKNDGWRNEPGWQGDPGWNR 302
++ D + P + D NR
Sbjct: 287 EYRRDAYSRSPSPRRDREENR 307
>SPAC6G10.02c |tea3||cell end marker Tea3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1125
Score = 26.6 bits (56), Expect = 6.7
Identities = 12/47 (25%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Query: 23 SASVLKEALEEHLKDVAHNEGAESIKHDKQKGEKVHQLESQINDSHK 69
S ++++ L + L + NE +++K + +K+ LESQ+ H+
Sbjct: 847 SKAIMQSGLSKLLSSI--NENKDNLKEFSKSKQKISYLESQLEGLHE 891
>SPBC947.07 |||ribosome biogenesis protein
Rrp14-C|Schizosaccharomyces pombe|chr 2|||Manual
Length = 233
Score = 26.6 bits (56), Expect = 6.7
Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Query: 44 AESIKHDKQKGEKVHQLESQINDSHKNHYSKANDETKYL-KKEHDTKSATDSDAYKGHNS 102
AE I+ + + + +++ + + +KA E K L KKE K + AY NS
Sbjct: 15 AEKIQTFRSQRKATEKVDRALLLQRRKEKAKARAEAKKLAKKESKAKQESKVAAYDTGNS 74
Query: 103 SQDKAEDSH 111
S + A++ +
Sbjct: 75 SDNIADEEN 83
>SPBC17D11.01 |nep1||nedd8 protease Nep1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 420
Score = 26.6 bits (56), Expect = 6.7
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 224 NDHNSYDNGKLRDYHEYRVPEVHHHHH 250
N HN++++ K + + HHHHH
Sbjct: 283 NHHNNHESDKDLHHEGHHHHHHHHHHH 309
Score = 26.6 bits (56), Expect = 6.7
Identities = 10/34 (29%), Positives = 17/34 (50%), Gaps = 4/34 (11%)
Query: 218 NHNKYRNDHNSYDNGKLRDYHEYRVPEVHHHHHD 251
+HN + +D + + G +H + HHH HD
Sbjct: 284 HHNNHESDKDLHHEGHHHHHHHHH----HHHSHD 313
>SPCC1322.09 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 455
Score = 26.2 bits (55), Expect = 8.8
Identities = 24/107 (22%), Positives = 42/107 (39%), Gaps = 4/107 (3%)
Query: 78 ETKYLKKEHDTKSAT-DSDAYKGHNSSQDKAEDSHATGYKRXXXXXXXXXXFQNSYHKDE 136
ETK + +T A+ D + +S++ D G F + DE
Sbjct: 3 ETKEQTDDVETLMASLDQLGMEADPTSKEFNNDDSKIGAPSEVQDEKELLEFLDQLENDE 62
Query: 137 SSNKSTFFDDLNDEGDQ-AAYNSRLNSHD--NQGGRSYQGSHNNGQE 180
N+ ++ N+E + AA ++ HD NQ ++ Q + N E
Sbjct: 63 EKNEKNPIEEANEENESVAATSNERQQHDASNQPSQAAQTTINKNTE 109
>SPCC1235.01 ||SPCC320.02c|sequence orphan|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 658
Score = 26.2 bits (55), Expect = 8.8
Identities = 17/78 (21%), Positives = 30/78 (38%), Gaps = 2/78 (2%)
Query: 157 NSRLNSHDNQGGRSYQGSHNNGQEYVXXXXXXXXXXXXXXXXXKQNL-RHDYGKKYILDD 215
N+ N++ N G + S NN Q++ N + +Y +
Sbjct: 562 NNNNNNNSNSGNYNNNNSGNNNQQHQQSSSSLQGLASSFLNSSSGNSNKQNYNNNNNQNY 621
Query: 216 ALNHNK-YRNDHNSYDNG 232
N+N+ Y N++NS G
Sbjct: 622 GNNNNQNYNNNNNSSQGG 639
>SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit
Psm3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1194
Score = 26.2 bits (55), Expect = 8.8
Identities = 15/64 (23%), Positives = 29/64 (45%)
Query: 26 VLKEALEEHLKDVAHNEGAESIKHDKQKGEKVHQLESQINDSHKNHYSKANDETKYLKKE 85
+LKE + + E + + QK EK+ +L I + + + ND Y KK+
Sbjct: 158 LLKEVAGTQIYENRRAESNKIMDETIQKSEKIDELLQYIEERLRELEEEKNDLAVYHKKD 217
Query: 86 HDTK 89
++ +
Sbjct: 218 NERR 221
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.311 0.130 0.404
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,969,779
Number of Sequences: 5004
Number of extensions: 82694
Number of successful extensions: 258
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 208
Number of HSP's gapped (non-prelim): 43
length of query: 429
length of database: 2,362,478
effective HSP length: 75
effective length of query: 354
effective length of database: 1,987,178
effective search space: 703461012
effective search space used: 703461012
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 55 (26.2 bits)
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