Silkworm BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000991-TA|BGIBMGA000991-PA|IPR004154|Anticodon-binding,
IPR009068|S15/NS1, RNA-binding, IPR010987|Glutathione S-transferase,
C-terminal-like, IPR000738|WHEP-TRS
         (491 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.               23   4.4  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    23   5.8  

>DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.
          Length = 132

 Score = 23.4 bits (48), Expect = 4.4
 Identities = 12/40 (30%), Positives = 20/40 (50%)

Query: 56  GYVPSKPDVDVAKALKSLDFSNYKYIKRWWNHMRSFSDTE 95
           G +    +VDV KAL+ L  S     K+ +N  +S  + +
Sbjct: 67  GILDKNAEVDVQKALRHLPRSMQDSTKKLFNKCKSIQNED 106


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 23.0 bits (47), Expect = 5.8
 Identities = 10/24 (41%), Positives = 14/24 (58%)

Query: 362 GVERIFSVLEAKLAAGDITVRTSD 385
           GVE +   L   +A  ++TVR SD
Sbjct: 652 GVETLAQFLTGNMAVTEVTVRFSD 675


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.318    0.136    0.389 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,598
Number of Sequences: 429
Number of extensions: 5491
Number of successful extensions: 10
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 8
Number of HSP's gapped (non-prelim): 2
length of query: 491
length of database: 140,377
effective HSP length: 60
effective length of query: 431
effective length of database: 114,637
effective search space: 49408547
effective search space used: 49408547
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 46 (22.6 bits)