GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000991-TA|BGIBMGA000991-PA|IPR004154|Anticodon-binding,
IPR009068|S15/NS1, RNA-binding, IPR010987|Glutathione S-transferase,
C-terminal-like, IPR000738|WHEP-TRS
         (491 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    27   1.1  
AY081778-1|AAL91655.1|  507|Anopheles gambiae cytochrome P450 pr...    26   2.6  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            25   6.1  
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    25   6.1  

>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 27.1 bits (57), Expect = 1.1
 Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 2/49 (4%)

Query: 5   QEDLLLKIQEQGDLVRKLKAAKDSNE--RGKGFKEVYNFEEIDKHLSHY 51
           Q+DL   I +QG+L +K++   +S E  R +  +   NF E+ K   HY
Sbjct: 417 QDDLKKDIAKQGELEKKIQEHTESFEQLRVQIDEHNKNFYELKKKKDHY 465


>AY081778-1|AAL91655.1|  507|Anopheles gambiae cytochrome P450
           protein.
          Length = 507

 Score = 25.8 bits (54), Expect = 2.6
 Identities = 13/61 (21%), Positives = 29/61 (47%)

Query: 126 KLLALKAQLVTEDAGPQKFTLKTPKGTRDYNPQQMTIRNNVLDKIITVFRRHGAECIDTP 185
           K LA +  +   D G ++F L+  +GT +Y       R++ ++ ++ +      +  D P
Sbjct: 230 KGLAKRIGMKLTDEGVERFFLQVVRGTVEYREMNNVQRSDFMNLLLQIKNTGSLDGGDVP 289

Query: 186 V 186
           +
Sbjct: 290 I 290


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 24.6 bits (51), Expect = 6.1
 Identities = 9/26 (34%), Positives = 14/26 (53%)

Query: 181 CIDTPVFELKDFDIAGIYDPMVPDAE 206
           C+  PVF    F++  I+D  + D E
Sbjct: 311 CLYRPVFGNDGFELVNIFDETIEDGE 336


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
           FGF-signaling promoter protein.
          Length = 1197

 Score = 24.6 bits (51), Expect = 6.1
 Identities = 16/70 (22%), Positives = 29/70 (41%), Gaps = 1/70 (1%)

Query: 92  SDTEVSLFPDFRQPNFLKYNSKKILESQVKEEVSKLLALKAQLVTEDAGPQKFTLKTPKG 151
           S+  V+ F     P + ++ +  + E      VS+LL +   ++ +    Q    +TP G
Sbjct: 310 SECAVNEFAKTSLPGYSRWRTCSVREKDTAF-VSELLGIATDILGKALRQQTVLQRTPSG 368

Query: 152 TRDYNPQQMT 161
           T    P   T
Sbjct: 369 TEPKTPTSPT 378


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.318    0.136    0.389 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 468,295
Number of Sequences: 2123
Number of extensions: 18631
Number of successful extensions: 30
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 28
Number of HSP's gapped (non-prelim): 4
length of query: 491
length of database: 516,269
effective HSP length: 67
effective length of query: 424
effective length of database: 374,028
effective search space: 158587872
effective search space used: 158587872
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 50 (24.2 bits)