Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000991-TA|BGIBMGA000991-PA|IPR004154|Anticodon-binding,
IPR009068|S15/NS1, RNA-binding, IPR010987|Glutathione S-transferase,
C-terminal-like, IPR000738|WHEP-TRS
(491 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69384-2|CAD89746.1| 521|Caenorhabditis elegans Hypothetical pr... 153 3e-37
Z69384-1|CAA93416.1| 520|Caenorhabditis elegans Hypothetical pr... 153 3e-37
S68230-1|AAD14008.1| 514|Caenorhabditis elegans histidyl tRNA s... 116 4e-26
L13152-1|AAB38116.1| 525|Caenorhabditis elegans histidyl tRNA s... 116 4e-26
AL117204-13|CAB55128.1| 286|Caenorhabditis elegans Hypothetical... 33 0.60
AC024798-12|AAK29920.2| 1725|Caenorhabditis elegans Hypothetical... 32 0.80
L25599-6|AAA28051.1| 213|Caenorhabditis elegans Hypothetical pr... 30 4.3
Z49938-5|CAD31752.1| 1467|Caenorhabditis elegans Hypothetical pr... 29 5.6
Z49938-4|CAA90189.3| 2180|Caenorhabditis elegans Hypothetical pr... 29 5.6
Z49938-1|CAD59171.1| 1216|Caenorhabditis elegans Hypothetical pr... 29 5.6
Z47356-5|CAA87418.1| 173|Caenorhabditis elegans Hypothetical pr... 29 5.6
Z46811-2|CAD31753.1| 1467|Caenorhabditis elegans Hypothetical pr... 29 5.6
Z46811-1|CAA86842.3| 2180|Caenorhabditis elegans Hypothetical pr... 29 5.6
AF316540-1|AAK01633.1| 1487|Caenorhabditis elegans PTP-3B protein. 29 5.6
AF316539-1|AAK01632.1| 2200|Caenorhabditis elegans PTP-3A protein. 29 5.6
Z69902-6|CAD89723.1| 684|Caenorhabditis elegans Hypothetical pr... 29 7.4
Z69902-5|CAA93762.1| 725|Caenorhabditis elegans Hypothetical pr... 29 7.4
AF101312-4|AAC69220.1| 358|Caenorhabditis elegans Hypothetical ... 29 7.4
U00037-4|AAU20840.1| 454|Caenorhabditis elegans Prolyl trna syn... 29 9.8
U00037-3|AAA50660.1| 581|Caenorhabditis elegans Prolyl trna syn... 29 9.8
>Z69384-2|CAD89746.1| 521|Caenorhabditis elegans Hypothetical
protein T11G6.1b protein.
Length = 521
Score = 153 bits (371), Expect = 3e-37
Identities = 77/178 (43%), Positives = 110/178 (61%), Gaps = 7/178 (3%)
Query: 191 DFDIAGIYDPMVPDAECLKVVTEILEALDIGQYILKVNHRRLLDGMFEACGVPADKFRTT 250
DFDIAG YD M+P+AECL +V E+L L+IG++ + +NHR +L+GMF G+PA F+T
Sbjct: 182 DFDIAGQYDLMLPEAECLGIVDELLTKLEIGEFFINLNHRLILEGMFAVSGIPAKDFKTI 241
Query: 251 CSTVDKLDKSPWEEVRTEMINEKGVSPDAADRIGE---YGRLN---GSTXXXXXXXXXXX 304
CS+VDKLDK+PWE+V EMINEK ++ + ++GE + LN +
Sbjct: 242 CSSVDKLDKTPWEDVEQEMINEKFLTKEQTGKLGELVRFRELNSDLNNLELLEKMSQLPD 301
Query: 305 XXXXXAALEGVEAIKTLLQYCELFGIKDKILFDLSLARGLDYYTGVIYEAVLTRVSIG 362
+G E +K L++Y + G+ + ++ SLARGLDYYTG IYEAV + G
Sbjct: 302 LGQNDKFKKGAEELKVLIEYLNVDGV-TTVRYEPSLARGLDYYTGAIYEAVAPKALEG 358
Score = 123 bits (297), Expect = 2e-28
Identities = 56/118 (47%), Positives = 84/118 (71%), Gaps = 3/118 (2%)
Query: 359 VSIGVERIFSVLEAKLAAGDITVRTSDIDVYVASAQKNFLEERMKICAELWDAGIKTEQS 418
VS G+ER+F+++EA+ + +RT+ +VYVASAQKN + +R K+ L AGIKTE +
Sbjct: 401 VSFGIERLFAIMEARQK---VAIRTTQTEVYVASAQKNLVRDRKKLVKMLRSAGIKTEMA 457
Query: 419 YKKNPKMLNQLQHCEENKIPLAVVLGDSELKRGVVKIRNITTREEDEVPRNDLVQEIK 476
K NPK+L Q Q+ EE +IPLA+V+G+ ELK GVVK+RN+ TR+E + + L+ ++
Sbjct: 458 LKANPKLLTQFQYAEERRIPLAIVIGEQELKDGVVKLRNVVTRDEQTIKLDQLITAVR 515
Score = 74.9 bits (176), Expect = 1e-13
Identities = 38/76 (50%), Positives = 50/76 (65%), Gaps = 4/76 (5%)
Query: 119 QVKEEVSKLLALKAQLVTEDAGPQK---FTLKTPKGTRDYNPQQMTIRNNVLDKIITVFR 175
++KE+V+ L+ K + E P+K F LKT KGTRDY P Q +RN+VL + F
Sbjct: 33 RIKEKVA-LMQAKRKEAGETGAPEKPGKFVLKTGKGTRDYGPAQSALRNSVLQTVTETFN 91
Query: 176 RHGAECIDTPVFELKD 191
R+GAE IDTPVFEL+D
Sbjct: 92 RYGAETIDTPVFELRD 107
>Z69384-1|CAA93416.1| 520|Caenorhabditis elegans Hypothetical
protein T11G6.1a protein.
Length = 520
Score = 153 bits (371), Expect = 3e-37
Identities = 77/178 (43%), Positives = 110/178 (61%), Gaps = 7/178 (3%)
Query: 191 DFDIAGIYDPMVPDAECLKVVTEILEALDIGQYILKVNHRRLLDGMFEACGVPADKFRTT 250
DFDIAG YD M+P+AECL +V E+L L+IG++ + +NHR +L+GMF G+PA F+T
Sbjct: 181 DFDIAGQYDLMLPEAECLGIVDELLTKLEIGEFFINLNHRLILEGMFAVSGIPAKDFKTI 240
Query: 251 CSTVDKLDKSPWEEVRTEMINEKGVSPDAADRIGE---YGRLN---GSTXXXXXXXXXXX 304
CS+VDKLDK+PWE+V EMINEK ++ + ++GE + LN +
Sbjct: 241 CSSVDKLDKTPWEDVEQEMINEKFLTKEQTGKLGELVRFRELNSDLNNLELLEKMSQLPD 300
Query: 305 XXXXXAALEGVEAIKTLLQYCELFGIKDKILFDLSLARGLDYYTGVIYEAVLTRVSIG 362
+G E +K L++Y + G+ + ++ SLARGLDYYTG IYEAV + G
Sbjct: 301 LGQNDKFKKGAEELKVLIEYLNVDGV-TTVRYEPSLARGLDYYTGAIYEAVAPKALEG 357
Score = 123 bits (297), Expect = 2e-28
Identities = 56/118 (47%), Positives = 84/118 (71%), Gaps = 3/118 (2%)
Query: 359 VSIGVERIFSVLEAKLAAGDITVRTSDIDVYVASAQKNFLEERMKICAELWDAGIKTEQS 418
VS G+ER+F+++EA+ + +RT+ +VYVASAQKN + +R K+ L AGIKTE +
Sbjct: 400 VSFGIERLFAIMEARQK---VAIRTTQTEVYVASAQKNLVRDRKKLVKMLRSAGIKTEMA 456
Query: 419 YKKNPKMLNQLQHCEENKIPLAVVLGDSELKRGVVKIRNITTREEDEVPRNDLVQEIK 476
K NPK+L Q Q+ EE +IPLA+V+G+ ELK GVVK+RN+ TR+E + + L+ ++
Sbjct: 457 LKANPKLLTQFQYAEERRIPLAIVIGEQELKDGVVKLRNVVTRDEQTIKLDQLITAVR 514
Score = 74.5 bits (175), Expect = 2e-13
Identities = 38/75 (50%), Positives = 49/75 (65%), Gaps = 4/75 (5%)
Query: 120 VKEEVSKLLALKAQLVTEDAGPQK---FTLKTPKGTRDYNPQQMTIRNNVLDKIITVFRR 176
+KE+V+ L+ K + E P+K F LKT KGTRDY P Q +RN+VL + F R
Sbjct: 33 IKEKVA-LMQAKRKEAGETGAPEKPGKFVLKTGKGTRDYGPAQSALRNSVLQTVTETFNR 91
Query: 177 HGAECIDTPVFELKD 191
+GAE IDTPVFEL+D
Sbjct: 92 YGAETIDTPVFELRD 106
>S68230-1|AAD14008.1| 514|Caenorhabditis elegans histidyl tRNA
synthetase protein.
Length = 514
Score = 116 bits (279), Expect = 4e-26
Identities = 65/178 (36%), Positives = 94/178 (52%), Gaps = 7/178 (3%)
Query: 191 DFDIAGIYDPMVPDAECLKVVTEILEALDIGQYILKVNHRRLLDGMFEACGVPADKFRTT 250
DFDIAG YD M+P+ +++ + + L +L+GMF G+PA F+T
Sbjct: 131 DFDIAGQYDLMLPELSVWELLMSCSRNWKLESFSLISITVLILEGMFAVSGIPAKDFKTI 190
Query: 251 CSTVDKLDKSPWEEVRTEMINEKGVSPDAADRIGEYGRLNGSTXXXXXXXXXX------X 304
CS+VDKLDK+PWE+V EMINEK ++ + ++GE R S
Sbjct: 191 CSSVDKLDKTPWEDVEQEMINEKFLTKEQTGKLGELVRFESSIAISTIWNFLKKCHNLPD 250
Query: 305 XXXXXAALEGVEAIKTLLQYCELFGIKDKILFDLSLARGLDYYTGVIYEAVLTRVSIG 362
+G E +K L++Y + G+ + ++ SLARGLDYYTG IYEAV + G
Sbjct: 251 LGQNDKFKKGAEELKVLIEYLNVDGV-TTVRYEPSLARGLDYYTGAIYEAVAPKALEG 307
Score = 72.5 bits (170), Expect = 6e-13
Identities = 32/51 (62%), Positives = 37/51 (72%)
Query: 141 PQKFTLKTPKGTRDYNPQQMTIRNNVLDKIITVFRRHGAECIDTPVFELKD 191
P KF LKT KGTRDY P Q +RN+VL + F R+GAE IDTPVFEL+D
Sbjct: 6 PGKFVLKTGKGTRDYGPAQSALRNSVLQTVTETFNRYGAETIDTPVFELRD 56
Score = 68.1 bits (159), Expect = 1e-11
Identities = 39/120 (32%), Positives = 67/120 (55%), Gaps = 7/120 (5%)
Query: 359 VSIGVERIFSVLEAKLAAGDITVRTSDIDVYVASAQKNFLEERMKICAELWDAGIK-TEQ 417
VS G+ER+F+++EA+ + +RT+ +VYVASAQKN + +R K+ L AG + +
Sbjct: 350 VSFGIERLFAIMEARQK---VAIRTTQTEVYVASAQKNLVRDRKKLVKMLRSAGTQGLKM 406
Query: 418 SYKKNPKMLNQLQHC-EENKIPLAVVLGDSELKRGVVKIRNITTREEDEVPRNDLVQEIK 476
+ K NPK+L + C +++IP +S K V TR+E + + L+ ++
Sbjct: 407 ALKANPKLLTSIPVCLRKDRIPSCYCYYESRAKMSV--SAKCVTRDEQTIKLDQLITAVR 464
>L13152-1|AAB38116.1| 525|Caenorhabditis elegans histidyl tRNA
synthetase protein.
Length = 525
Score = 116 bits (279), Expect = 4e-26
Identities = 65/178 (36%), Positives = 94/178 (52%), Gaps = 7/178 (3%)
Query: 191 DFDIAGIYDPMVPDAECLKVVTEILEALDIGQYILKVNHRRLLDGMFEACGVPADKFRTT 250
DFDIAG YD M+P+ +++ + + L +L+GMF G+PA F+T
Sbjct: 142 DFDIAGQYDLMLPELSVWELLMSCSRNWKLESFSLISITVLILEGMFAVSGIPAKDFKTI 201
Query: 251 CSTVDKLDKSPWEEVRTEMINEKGVSPDAADRIGEYGRLNGSTXXXXXXXXXX------X 304
CS+VDKLDK+PWE+V EMINEK ++ + ++GE R S
Sbjct: 202 CSSVDKLDKTPWEDVEQEMINEKFLTKEQTGKLGELVRFESSIAISTIWNFLKKCHNLPD 261
Query: 305 XXXXXAALEGVEAIKTLLQYCELFGIKDKILFDLSLARGLDYYTGVIYEAVLTRVSIG 362
+G E +K L++Y + G+ + ++ SLARGLDYYTG IYEAV + G
Sbjct: 262 LGQNDKFKKGAEELKVLIEYLNVDGV-TTVRYEPSLARGLDYYTGAIYEAVAPKALEG 318
Score = 72.5 bits (170), Expect = 6e-13
Identities = 32/51 (62%), Positives = 37/51 (72%)
Query: 141 PQKFTLKTPKGTRDYNPQQMTIRNNVLDKIITVFRRHGAECIDTPVFELKD 191
P KF LKT KGTRDY P Q +RN+VL + F R+GAE IDTPVFEL+D
Sbjct: 17 PGKFVLKTGKGTRDYGPAQSALRNSVLQTVTETFNRYGAETIDTPVFELRD 67
Score = 68.1 bits (159), Expect = 1e-11
Identities = 39/120 (32%), Positives = 67/120 (55%), Gaps = 7/120 (5%)
Query: 359 VSIGVERIFSVLEAKLAAGDITVRTSDIDVYVASAQKNFLEERMKICAELWDAGIK-TEQ 417
VS G+ER+F+++EA+ + +RT+ +VYVASAQKN + +R K+ L AG + +
Sbjct: 361 VSFGIERLFAIMEARQK---VAIRTTQTEVYVASAQKNLVRDRKKLVKMLRSAGTQGLKM 417
Query: 418 SYKKNPKMLNQLQHC-EENKIPLAVVLGDSELKRGVVKIRNITTREEDEVPRNDLVQEIK 476
+ K NPK+L + C +++IP +S K V TR+E + + L+ ++
Sbjct: 418 ALKANPKLLTSIPVCLRKDRIPSCYCYYESRAKMSV--SAKCVTRDEQTIKLDQLITAVR 475
>AL117204-13|CAB55128.1| 286|Caenorhabditis elegans Hypothetical
protein Y116A8C.22 protein.
Length = 286
Score = 32.7 bits (71), Expect = 0.60
Identities = 29/109 (26%), Positives = 52/109 (47%), Gaps = 3/109 (2%)
Query: 371 EAKLAAGDITVRTSDIDVYVASAQKNFLEERMKICAELWDAGIKTEQSYKKNPKMLNQL- 429
E K+ D S ID+ V + +N IC + G K + + NP ++ Q+
Sbjct: 18 EIKIEEEDDDYPLSTIDMAVQALIRNPHHNVDYICGVMIFGGSKNQFNELLNPVVVAQMS 77
Query: 430 QHCEENKIPLAVVLGDSELKRGVVKIRNITTREEDEVPRNDLVQEIKKR 478
+ ++ K+P+ G E KRG + R ++ E+ ++P+ + E KKR
Sbjct: 78 KQRKQKKVPVKNPAG--EAKRGRGRPRKQSSEEKVQIPKVVVKFEPKKR 124
>AC024798-12|AAK29920.2| 1725|Caenorhabditis elegans Hypothetical
protein Y48G9A.1 protein.
Length = 1725
Score = 32.3 bits (70), Expect = 0.80
Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 3/66 (4%)
Query: 117 ESQVKEEVSKLLALKAQLVTEDAGPQKFTLKTPKGTRDYNPQQMTIRNNVLDKIITVFRR 176
ES + + + L L A L ++ Q + P G D + RN + + + RR
Sbjct: 293 ESDRRSGIGQTLVLLAGLCRQEEAEQLIRIVAPDGLSD---RAQECRNELRNAAVETIRR 349
Query: 177 HGAECI 182
HGA C+
Sbjct: 350 HGAACM 355
>L25599-6|AAA28051.1| 213|Caenorhabditis elegans Hypothetical
protein F54H12.6 protein.
Length = 213
Score = 29.9 bits (64), Expect = 4.3
Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 48 LSHYSYICGYVPSKPDVDVAKALKSL-DFSNYKYIKRWWNHMRSFSDTE 95
L+ ++ G+V S D + AL S + S Y + RW+ ++ S++D E
Sbjct: 18 LAEQAFATGFVLSGEDAQLFAALGSAPNASTYPNVARWYANVASYTDAE 66
>Z49938-5|CAD31752.1| 1467|Caenorhabditis elegans Hypothetical
protein C09D8.1b protein.
Length = 1467
Score = 29.5 bits (63), Expect = 5.6
Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Query: 27 DSNERGKGFKEVYNFEEIDKHLSHYSYICGYVPSKPDVDVAKALKSLDFSNYKYIKRWWN 86
+S E G+ F ++ +++KH + Y+ + Y S+ + + +D+ N Y+ ++
Sbjct: 919 ESIETGQHFTWEHSSADMNKHKNRYANVAAYDHSRVVLSNVEGYPGMDYINANYVD-GYD 977
Query: 87 HMRSFSDTEVSL---FPDF 102
RS+ T+ L F DF
Sbjct: 978 KPRSYIATQGPLPETFSDF 996
>Z49938-4|CAA90189.3| 2180|Caenorhabditis elegans Hypothetical protein
C09D8.1a protein.
Length = 2180
Score = 29.5 bits (63), Expect = 5.6
Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Query: 27 DSNERGKGFKEVYNFEEIDKHLSHYSYICGYVPSKPDVDVAKALKSLDFSNYKYIKRWWN 86
+S E G+ F ++ +++KH + Y+ + Y S+ + + +D+ N Y+ ++
Sbjct: 1632 ESIETGQHFTWEHSSADMNKHKNRYANVAAYDHSRVVLSNVEGYPGMDYINANYVD-GYD 1690
Query: 87 HMRSFSDTEVSL---FPDF 102
RS+ T+ L F DF
Sbjct: 1691 KPRSYIATQGPLPETFSDF 1709
>Z49938-1|CAD59171.1| 1216|Caenorhabditis elegans Hypothetical
protein C09D8.1c protein.
Length = 1216
Score = 29.5 bits (63), Expect = 5.6
Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Query: 27 DSNERGKGFKEVYNFEEIDKHLSHYSYICGYVPSKPDVDVAKALKSLDFSNYKYIKRWWN 86
+S E G+ F ++ +++KH + Y+ + Y S+ + + +D+ N Y+ ++
Sbjct: 668 ESIETGQHFTWEHSSADMNKHKNRYANVAAYDHSRVVLSNVEGYPGMDYINANYVD-GYD 726
Query: 87 HMRSFSDTEVSL---FPDF 102
RS+ T+ L F DF
Sbjct: 727 KPRSYIATQGPLPETFSDF 745
>Z47356-5|CAA87418.1| 173|Caenorhabditis elegans Hypothetical
protein T15H9.5 protein.
Length = 173
Score = 29.5 bits (63), Expect = 5.6
Identities = 17/64 (26%), Positives = 33/64 (51%)
Query: 416 EQSYKKNPKMLNQLQHCEENKIPLAVVLGDSELKRGVVKIRNITTREEDEVPRNDLVQEI 475
++S+ KN K+ + + EE K P++ S +K K +EED+ P + +++
Sbjct: 42 DESHSKNQKLPSAEKSVEECKKPVSPEKKKSPIKVLSEKKLKSKKKEEDKEPDEKVEKDV 101
Query: 476 KKRI 479
KK +
Sbjct: 102 KKEV 105
>Z46811-2|CAD31753.1| 1467|Caenorhabditis elegans Hypothetical
protein C09D8.1b protein.
Length = 1467
Score = 29.5 bits (63), Expect = 5.6
Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Query: 27 DSNERGKGFKEVYNFEEIDKHLSHYSYICGYVPSKPDVDVAKALKSLDFSNYKYIKRWWN 86
+S E G+ F ++ +++KH + Y+ + Y S+ + + +D+ N Y+ ++
Sbjct: 919 ESIETGQHFTWEHSSADMNKHKNRYANVAAYDHSRVVLSNVEGYPGMDYINANYVD-GYD 977
Query: 87 HMRSFSDTEVSL---FPDF 102
RS+ T+ L F DF
Sbjct: 978 KPRSYIATQGPLPETFSDF 996
>Z46811-1|CAA86842.3| 2180|Caenorhabditis elegans Hypothetical protein
C09D8.1a protein.
Length = 2180
Score = 29.5 bits (63), Expect = 5.6
Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Query: 27 DSNERGKGFKEVYNFEEIDKHLSHYSYICGYVPSKPDVDVAKALKSLDFSNYKYIKRWWN 86
+S E G+ F ++ +++KH + Y+ + Y S+ + + +D+ N Y+ ++
Sbjct: 1632 ESIETGQHFTWEHSSADMNKHKNRYANVAAYDHSRVVLSNVEGYPGMDYINANYVD-GYD 1690
Query: 87 HMRSFSDTEVSL---FPDF 102
RS+ T+ L F DF
Sbjct: 1691 KPRSYIATQGPLPETFSDF 1709
>AF316540-1|AAK01633.1| 1487|Caenorhabditis elegans PTP-3B protein.
Length = 1487
Score = 29.5 bits (63), Expect = 5.6
Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Query: 27 DSNERGKGFKEVYNFEEIDKHLSHYSYICGYVPSKPDVDVAKALKSLDFSNYKYIKRWWN 86
+S E G+ F ++ +++KH + Y+ + Y S+ + + +D+ N Y+ ++
Sbjct: 939 ESIETGQHFTWEHSSADMNKHKNRYANVAAYDHSRVVLSNVEGYPGMDYINANYVD-GYD 997
Query: 87 HMRSFSDTEVSL---FPDF 102
RS+ T+ L F DF
Sbjct: 998 KPRSYIATQGPLPETFSDF 1016
>AF316539-1|AAK01632.1| 2200|Caenorhabditis elegans PTP-3A protein.
Length = 2200
Score = 29.5 bits (63), Expect = 5.6
Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Query: 27 DSNERGKGFKEVYNFEEIDKHLSHYSYICGYVPSKPDVDVAKALKSLDFSNYKYIKRWWN 86
+S E G+ F ++ +++KH + Y+ + Y S+ + + +D+ N Y+ ++
Sbjct: 1652 ESIETGQHFTWEHSSADMNKHKNRYANVAAYDHSRVVLSNVEGYPGMDYINANYVD-GYD 1710
Query: 87 HMRSFSDTEVSL---FPDF 102
RS+ T+ L F DF
Sbjct: 1711 KPRSYIATQGPLPETFSDF 1729
>Z69902-6|CAD89723.1| 684|Caenorhabditis elegans Hypothetical
protein C47D12.6b protein.
Length = 684
Score = 29.1 bits (62), Expect = 7.4
Identities = 15/74 (20%), Positives = 33/74 (44%)
Query: 407 ELWDAGIKTEQSYKKNPKMLNQLQHCEENKIPLAVVLGDSELKRGVVKIRNITTREEDEV 466
++++AG + E M Q++ + + +V+G E + G V +R EV
Sbjct: 598 QIFEAGFEIEYEENCGDTMNKQVRKAQLAQFNFILVIGAKEKENGTVNVRTRDNAVRGEV 657
Query: 467 PRNDLVQEIKKRID 480
+ L+ + ++ D
Sbjct: 658 ALDKLISKFRRFAD 671
>Z69902-5|CAA93762.1| 725|Caenorhabditis elegans Hypothetical
protein C47D12.6a protein.
Length = 725
Score = 29.1 bits (62), Expect = 7.4
Identities = 15/74 (20%), Positives = 33/74 (44%)
Query: 407 ELWDAGIKTEQSYKKNPKMLNQLQHCEENKIPLAVVLGDSELKRGVVKIRNITTREEDEV 466
++++AG + E M Q++ + + +V+G E + G V +R EV
Sbjct: 639 QIFEAGFEIEYEENCGDTMNKQVRKAQLAQFNFILVIGAKEKENGTVNVRTRDNAVRGEV 698
Query: 467 PRNDLVQEIKKRID 480
+ L+ + ++ D
Sbjct: 699 ALDKLISKFRRFAD 712
>AF101312-4|AAC69220.1| 358|Caenorhabditis elegans Hypothetical
protein F56E10.1 protein.
Length = 358
Score = 29.1 bits (62), Expect = 7.4
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 6/53 (11%)
Query: 36 KEVYNFEEIDKH------LSHYSYICGYVPSKPDVDVAKALKSLDFSNYKYIK 82
KEV N +E +K + H + Y P+ D+ + ALKS++F + + K
Sbjct: 176 KEVENADEKEKEQLKSEEIQHLCQVLAYEPNSSDIWLDVALKSIEFGDLNFSK 228
>U00037-4|AAU20840.1| 454|Caenorhabditis elegans Prolyl trna
synthetase protein1, isoform b protein.
Length = 454
Score = 28.7 bits (61), Expect = 9.8
Identities = 12/30 (40%), Positives = 21/30 (70%)
Query: 4 SQEDLLLKIQEQGDLVRKLKAAKDSNERGK 33
++E++ +I+EQG VR++K K+S E K
Sbjct: 3 TKEEITKEIEEQGAEVRRVKGDKNSTEEAK 32
>U00037-3|AAA50660.1| 581|Caenorhabditis elegans Prolyl trna
synthetase protein1, isoform a protein.
Length = 581
Score = 28.7 bits (61), Expect = 9.8
Identities = 12/30 (40%), Positives = 21/30 (70%)
Query: 4 SQEDLLLKIQEQGDLVRKLKAAKDSNERGK 33
++E++ +I+EQG VR++K K+S E K
Sbjct: 3 TKEEITKEIEEQGAEVRRVKGDKNSTEEAK 32
Score = 28.7 bits (61), Expect = 9.8
Identities = 17/86 (19%), Positives = 37/86 (43%)
Query: 403 KICAELWDAGIKTEQSYKKNPKMLNQLQHCEENKIPLAVVLGDSELKRGVVKIRNITTRE 462
K+ +L G+K E ++N + H E +P+ +G ++L + V E
Sbjct: 400 KVTKDLVADGVKAEHDLRENYNAGWKFNHWELKGVPIRFEVGPNDLAKNQVTAVIRHNGE 459
Query: 463 EDEVPRNDLVQEIKKRIDNLNLNQLN 488
+ ++ L + +K +D ++ N
Sbjct: 460 KKQLSLEGLSKTVKSLLDEIHTAMYN 485
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.318 0.136 0.389
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,426,122
Number of Sequences: 27539
Number of extensions: 481111
Number of successful extensions: 1402
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 1371
Number of HSP's gapped (non-prelim): 36
length of query: 491
length of database: 12,573,161
effective HSP length: 84
effective length of query: 407
effective length of database: 10,259,885
effective search space: 4175773195
effective search space used: 4175773195
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 61 (28.7 bits)
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