Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000990-TA|BGIBMGA000990-PA|IPR012337|Polynucleotidyl
transferase, Ribonuclease H fold
(290 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC030628-1|AAH30628.2| 514|Homo sapiens exonuclease 3'-5' domai... 105 2e-22
BC084542-1|AAH84542.1| 197|Homo sapiens C21orf66 protein protein. 33 1.2
BC030539-1|AAH30539.1| 398|Homo sapiens C21orf66 protein protein. 33 1.2
AY033906-1|AAK68724.1| 511|Homo sapiens C21ORF66 isoform D prot... 33 1.2
AY033905-1|AAK68723.1| 469|Homo sapiens C21ORF66 isoform C prot... 33 1.2
AY033904-1|AAK68722.1| 815|Homo sapiens C21ORF66 isoform B prot... 33 1.2
AY033903-1|AAK68721.1| 917|Homo sapiens C21ORF66 isoform A prot... 33 1.2
AJ279081-1|CAC40814.1| 511|Homo sapiens putative transcription ... 33 1.2
AJ279080-1|CAC40813.1| 917|Homo sapiens putative transcription ... 33 1.2
BC096217-1|AAH96217.1| 397|Homo sapiens serpin peptidase inhibi... 33 1.5
U35459-1|AAC50282.1| 397|Homo sapiens bomapin protein. 32 2.0
BC096220-1|AAH96220.1| 397|Homo sapiens serpin peptidase inhibi... 32 2.0
BC096219-1|AAH96219.1| 397|Homo sapiens serpin peptidase inhibi... 32 2.0
BC096218-1|AAH96218.1| 397|Homo sapiens serpin peptidase inhibi... 32 2.0
AL357081-2|CAI41323.1| 1362|Homo sapiens spectrin repeat contain... 30 8.3
AF535142-1|AAN03486.1| 8749|Homo sapiens enaptin protein. 30 8.3
AF495910-1|AAN60442.1| 8797|Homo sapiens nesprin-1 protein. 30 8.3
AB033088-1|BAA86576.1| 1362|Homo sapiens KIAA1262 protein protein. 30 8.3
>BC030628-1|AAH30628.2| 514|Homo sapiens exonuclease 3'-5'
domain-like 1 protein.
Length = 514
Score = 105 bits (251), Expect = 2e-22
Identities = 57/152 (37%), Positives = 93/152 (61%), Gaps = 6/152 (3%)
Query: 75 LKISQTKYEEILKISKKYIFINQVDKSFHEAVDDLNQQDFIAVSGDGANMGRKCKMPFLV 134
LK S ++ EE+ Y INQ + F A+ + +Q+ ++V+ +GAN+ R K+ +L
Sbjct: 66 LKYSPSEEEEVT-----YTVINQFQQKFGAAILHIKKQNVLSVAAEGANVCRHGKLCWLQ 120
Query: 135 LSTDHQIYIFDIQVMQYHAFESGLKKILEGDSPKKIAHDCRKLSDCLYHKHNVKLKSVFD 194
++T+ ++Y+FDI ++ AF +GL+ ILE K+ HDCR LSDCL H++ + L +VFD
Sbjct: 121 VATNCRVYLFDIFLLGSRAFHNGLQMILEDKRILKVIHDCRWLSDCLSHQYGILLNNVFD 180
Query: 195 TQVGDLI-ITKNKKVTLPNKVRSLGECLTNYL 225
TQV D++ + LPN + +L E L +L
Sbjct: 181 TQVADVLQFSMETGGYLPNCITTLQESLIKHL 212
>BC084542-1|AAH84542.1| 197|Homo sapiens C21orf66 protein protein.
Length = 197
Score = 33.1 bits (72), Expect = 1.2
Identities = 24/73 (32%), Positives = 42/73 (57%), Gaps = 10/73 (13%)
Query: 57 DSEIREVVKLQEST-EKKVLKISQTKYEEILKISKKYIFINQ-------VDKSFHEAVDD 108
+ E EV K+++S+ KK++K+ + +Y+E L+ SK +N +DK+ H V D
Sbjct: 113 EEENEEVFKVKKSSYSKKIVKLLKKEYKEDLEKSKIKTELNSSAESEQPLDKTGH--VKD 170
Query: 109 LNQQDFIAVSGDG 121
NQ+D + +S G
Sbjct: 171 TNQEDGVIISEHG 183
>BC030539-1|AAH30539.1| 398|Homo sapiens C21orf66 protein protein.
Length = 398
Score = 33.1 bits (72), Expect = 1.2
Identities = 24/73 (32%), Positives = 42/73 (57%), Gaps = 10/73 (13%)
Query: 57 DSEIREVVKLQEST-EKKVLKISQTKYEEILKISKKYIFINQ-------VDKSFHEAVDD 108
+ E EV K+++S+ KK++K+ + +Y+E L+ SK +N +DK+ H V D
Sbjct: 113 EEENEEVFKVKKSSYSKKIVKLLKKEYKEDLEKSKIKTELNSSAESEQPLDKTGH--VKD 170
Query: 109 LNQQDFIAVSGDG 121
NQ+D + +S G
Sbjct: 171 TNQEDGVIISEHG 183
>AY033906-1|AAK68724.1| 511|Homo sapiens C21ORF66 isoform D
protein.
Length = 511
Score = 33.1 bits (72), Expect = 1.2
Identities = 24/73 (32%), Positives = 42/73 (57%), Gaps = 10/73 (13%)
Query: 57 DSEIREVVKLQEST-EKKVLKISQTKYEEILKISKKYIFINQ-------VDKSFHEAVDD 108
+ E EV K+++S+ KK++K+ + +Y+E L+ SK +N +DK+ H V D
Sbjct: 113 EEENEEVFKVKKSSYSKKIVKLLKKEYKEDLEKSKIKTELNSSAESEQPLDKTGH--VKD 170
Query: 109 LNQQDFIAVSGDG 121
NQ+D + +S G
Sbjct: 171 TNQEDGVIISEHG 183
>AY033905-1|AAK68723.1| 469|Homo sapiens C21ORF66 isoform C
protein.
Length = 469
Score = 33.1 bits (72), Expect = 1.2
Identities = 24/73 (32%), Positives = 42/73 (57%), Gaps = 10/73 (13%)
Query: 57 DSEIREVVKLQEST-EKKVLKISQTKYEEILKISKKYIFINQ-------VDKSFHEAVDD 108
+ E EV K+++S+ KK++K+ + +Y+E L+ SK +N +DK+ H V D
Sbjct: 113 EEENEEVFKVKKSSYSKKIVKLLKKEYKEDLEKSKIKTELNSSAESEQPLDKTGH--VKD 170
Query: 109 LNQQDFIAVSGDG 121
NQ+D + +S G
Sbjct: 171 TNQEDGVIISEHG 183
>AY033904-1|AAK68722.1| 815|Homo sapiens C21ORF66 isoform B
protein.
Length = 815
Score = 33.1 bits (72), Expect = 1.2
Identities = 24/73 (32%), Positives = 42/73 (57%), Gaps = 10/73 (13%)
Query: 57 DSEIREVVKLQEST-EKKVLKISQTKYEEILKISKKYIFINQ-------VDKSFHEAVDD 108
+ E EV K+++S+ KK++K+ + +Y+E L+ SK +N +DK+ H V D
Sbjct: 113 EEENEEVFKVKKSSYSKKIVKLLKKEYKEDLEKSKIKTELNSSAESEQPLDKTGH--VKD 170
Query: 109 LNQQDFIAVSGDG 121
NQ+D + +S G
Sbjct: 171 TNQEDGVIISEHG 183
>AY033903-1|AAK68721.1| 917|Homo sapiens C21ORF66 isoform A
protein.
Length = 917
Score = 33.1 bits (72), Expect = 1.2
Identities = 24/73 (32%), Positives = 42/73 (57%), Gaps = 10/73 (13%)
Query: 57 DSEIREVVKLQEST-EKKVLKISQTKYEEILKISKKYIFINQ-------VDKSFHEAVDD 108
+ E EV K+++S+ KK++K+ + +Y+E L+ SK +N +DK+ H V D
Sbjct: 113 EEENEEVFKVKKSSYSKKIVKLLKKEYKEDLEKSKIKTELNSSAESEQPLDKTGH--VKD 170
Query: 109 LNQQDFIAVSGDG 121
NQ+D + +S G
Sbjct: 171 TNQEDGVIISEHG 183
>AJ279081-1|CAC40814.1| 511|Homo sapiens putative transcription
factor protein.
Length = 511
Score = 33.1 bits (72), Expect = 1.2
Identities = 24/73 (32%), Positives = 42/73 (57%), Gaps = 10/73 (13%)
Query: 57 DSEIREVVKLQEST-EKKVLKISQTKYEEILKISKKYIFINQ-------VDKSFHEAVDD 108
+ E EV K+++S+ KK++K+ + +Y+E L+ SK +N +DK+ H V D
Sbjct: 113 EEENEEVFKVKKSSYSKKIVKLLKKEYKEDLEKSKIKTELNSSAESEQPLDKTGH--VKD 170
Query: 109 LNQQDFIAVSGDG 121
NQ+D + +S G
Sbjct: 171 TNQEDGVIISEHG 183
>AJ279080-1|CAC40813.1| 917|Homo sapiens putative transcription
factor protein.
Length = 917
Score = 33.1 bits (72), Expect = 1.2
Identities = 24/73 (32%), Positives = 42/73 (57%), Gaps = 10/73 (13%)
Query: 57 DSEIREVVKLQEST-EKKVLKISQTKYEEILKISKKYIFINQ-------VDKSFHEAVDD 108
+ E EV K+++S+ KK++K+ + +Y+E L+ SK +N +DK+ H V D
Sbjct: 113 EEENEEVFKVKKSSYSKKIVKLLKKEYKEDLEKSKIKTELNSSAESEQPLDKTGH--VKD 170
Query: 109 LNQQDFIAVSGDG 121
NQ+D + +S G
Sbjct: 171 TNQEDGVIISEHG 183
>BC096217-1|AAH96217.1| 397|Homo sapiens serpin peptidase
inhibitor, clade B (ovalbumin), member 10 protein.
Length = 397
Score = 32.7 bits (71), Expect = 1.5
Identities = 17/67 (25%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 78 SQTKYEEILKISKKYIFINQVDKSFHEAVDDLNQQDFIAVSGDGANMGRKCKMPFLVLST 137
SQ+K + S + +F++ V FH+A ++N+Q A +G G+ + + ++P + +
Sbjct: 316 SQSKADFSGMSSARNLFLSNV---FHKAFVEINEQGTEAAAGSGSEINIRIRVPSIEFNA 372
Query: 138 DHQIYIF 144
+H F
Sbjct: 373 NHPFLFF 379
>U35459-1|AAC50282.1| 397|Homo sapiens bomapin protein.
Length = 397
Score = 32.3 bits (70), Expect = 2.0
Identities = 17/67 (25%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 78 SQTKYEEILKISKKYIFINQVDKSFHEAVDDLNQQDFIAVSGDGANMGRKCKMPFLVLST 137
SQ+K + S + +F++ V FH+A ++N+Q A +G G+ + + ++P + +
Sbjct: 316 SQSKADFSGMSSARNLFLSNV---FHKAFVEINEQGTEAAAGSGSEIDIRIRVPSIEFNA 372
Query: 138 DHQIYIF 144
+H F
Sbjct: 373 NHPFLFF 379
>BC096220-1|AAH96220.1| 397|Homo sapiens serpin peptidase
inhibitor, clade B (ovalbumin), member 10 protein.
Length = 397
Score = 32.3 bits (70), Expect = 2.0
Identities = 17/67 (25%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 78 SQTKYEEILKISKKYIFINQVDKSFHEAVDDLNQQDFIAVSGDGANMGRKCKMPFLVLST 137
SQ+K + S + +F++ V FH+A ++N+Q A +G G+ + + ++P + +
Sbjct: 316 SQSKADFSGMSSARNLFLSNV---FHKAFVEINEQGTEAAAGSGSEIDIRIRVPSIEFNA 372
Query: 138 DHQIYIF 144
+H F
Sbjct: 373 NHPFLFF 379
>BC096219-1|AAH96219.1| 397|Homo sapiens serpin peptidase
inhibitor, clade B (ovalbumin), member 10 protein.
Length = 397
Score = 32.3 bits (70), Expect = 2.0
Identities = 17/67 (25%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 78 SQTKYEEILKISKKYIFINQVDKSFHEAVDDLNQQDFIAVSGDGANMGRKCKMPFLVLST 137
SQ+K + S + +F++ V FH+A ++N+Q A +G G+ + + ++P + +
Sbjct: 316 SQSKADFSGMSSARNLFLSNV---FHKAFVEINEQGTEAAAGSGSEIDIRIRVPSIEFNA 372
Query: 138 DHQIYIF 144
+H F
Sbjct: 373 NHPFLFF 379
>BC096218-1|AAH96218.1| 397|Homo sapiens serpin peptidase
inhibitor, clade B (ovalbumin), member 10 protein.
Length = 397
Score = 32.3 bits (70), Expect = 2.0
Identities = 17/67 (25%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 78 SQTKYEEILKISKKYIFINQVDKSFHEAVDDLNQQDFIAVSGDGANMGRKCKMPFLVLST 137
SQ+K + S + +F++ V FH+A ++N+Q A +G G+ + + ++P + +
Sbjct: 316 SQSKADFSGMSSARNLFLSNV---FHKAFVEINEQGTEAAAGSGSEIDIRIRVPSIEFNA 372
Query: 138 DHQIYIF 144
+H F
Sbjct: 373 NHPFLFF 379
>AL357081-2|CAI41323.1| 1362|Homo sapiens spectrin repeat
containing, nuclear envelope 1 protein.
Length = 1362
Score = 30.3 bits (65), Expect = 8.3
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Query: 54 HYYDSEIREVVKLQESTEKKVLKISQTK----YEEILKISKKYIFINQVDKSFHEAVDDL 109
H Y EV++L TEKK+ + S K +E K+S+ ++ V+ SFHE + L
Sbjct: 886 HDYQKAREEVIELMNDTEKKLSEFSLLKTSSSHEAEEKLSEHKALVSVVN-SFHEKIVAL 944
Query: 110 NQQ 112
++
Sbjct: 945 EEK 947
>AF535142-1|AAN03486.1| 8749|Homo sapiens enaptin protein.
Length = 8749
Score = 30.3 bits (65), Expect = 8.3
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Query: 54 HYYDSEIREVVKLQESTEKKVLKISQTK----YEEILKISKKYIFINQVDKSFHEAVDDL 109
H Y EV++L TEKK+ + S K +E K+S+ ++ V+ SFHE + L
Sbjct: 5033 HDYQKAREEVIELMNDTEKKLSEFSLLKTSSSHEAEEKLSEHKALVSVVN-SFHEKIVAL 5091
Query: 110 NQQ 112
++
Sbjct: 5092 EEK 5094
>AF495910-1|AAN60442.1| 8797|Homo sapiens nesprin-1 protein.
Length = 8797
Score = 30.3 bits (65), Expect = 8.3
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Query: 54 HYYDSEIREVVKLQESTEKKVLKISQTK----YEEILKISKKYIFINQVDKSFHEAVDDL 109
H Y EV++L TEKK+ + S K +E K+S+ ++ V+ SFHE + L
Sbjct: 5104 HDYQKAREEVIELMNDTEKKLSEFSLLKTSSSHEAEEKLSEHKALVSVVN-SFHEKIVAL 5162
Query: 110 NQQ 112
++
Sbjct: 5163 EEK 5165
>AB033088-1|BAA86576.1| 1362|Homo sapiens KIAA1262 protein protein.
Length = 1362
Score = 30.3 bits (65), Expect = 8.3
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Query: 54 HYYDSEIREVVKLQESTEKKVLKISQTK----YEEILKISKKYIFINQVDKSFHEAVDDL 109
H Y EV++L TEKK+ + S K +E K+S+ ++ V+ SFHE + L
Sbjct: 886 HDYQKAREEVIELMNDTEKKLSEFSLLKTSSSHEAEEKLSEHKALVSVVN-SFHEKIVAL 944
Query: 110 NQQ 112
++
Sbjct: 945 EEK 947
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.317 0.135 0.378
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,747,161
Number of Sequences: 224733
Number of extensions: 1393018
Number of successful extensions: 3210
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 3205
Number of HSP's gapped (non-prelim): 21
length of query: 290
length of database: 73,234,838
effective HSP length: 89
effective length of query: 201
effective length of database: 53,233,601
effective search space: 10699953801
effective search space used: 10699953801
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 65 (30.3 bits)
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