Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000990-TA|BGIBMGA000990-PA|IPR012337|Polynucleotidyl
transferase, Ribonuclease H fold
(290 letters)
Database: fruitfly
52,641 sequences; 24,830,863 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY118948-1|AAM50808.1| 265|Drosophila melanogaster LD32220p pro... 75 1e-13
AE014296-2225|AAF49860.1| 265|Drosophila melanogaster CG11263-P... 75 1e-13
U86404-1|AAB49975.2| 993|Drosophila melanogaster egalitarian pr... 61 2e-09
BT009999-1|AAQ22468.1| 1004|Drosophila melanogaster RE33408p pro... 61 2e-09
AE013599-3677|AAF47054.3| 885|Drosophila melanogaster CG4051-PA... 61 2e-09
BT023783-1|AAZ41792.1| 1072|Drosophila melanogaster LD13709p pro... 33 0.61
BT001505-1|AAN71260.1| 624|Drosophila melanogaster LD35838p pro... 33 0.61
AY071601-1|AAL49223.1| 1140|Drosophila melanogaster RE65203p pro... 33 0.61
AE014297-92|AAN13317.2| 742|Drosophila melanogaster CG9805-PB, ... 33 0.61
AE014297-91|AAF52126.1| 1140|Drosophila melanogaster CG9805-PA, ... 33 0.61
AF520715-1|AAM55244.1| 4723|Drosophila melanogaster MICAL long i... 30 4.3
BT003178-1|AAO24933.1| 476|Drosophila melanogaster RH09265p pro... 29 7.5
U15974-1|AAA69929.1| 784|Drosophila melanogaster kinesin-like p... 29 9.9
U07629-1|AAA21249.2| 1494|Drosophila melanogaster beta-heavy-spe... 29 9.9
M88185-1|AAA28979.1| 1124|Drosophila melanogaster calmodulin-bin... 29 9.9
BT001397-1|AAN71152.1| 845|Drosophila melanogaster GH05912p pro... 29 9.9
AY119626-1|AAM50280.1| 1025|Drosophila melanogaster LP04011p pro... 29 9.9
AY051583-1|AAK93007.1| 784|Drosophila melanogaster GH23075p pro... 29 9.9
AE014296-2032|AAF50008.1| 784|Drosophila melanogaster CG7293-PA... 29 9.9
AE014296-651|AAF47766.1| 4097|Drosophila melanogaster CG12008-PA... 29 9.9
AE014296-650|AAS64958.1| 4118|Drosophila melanogaster CG12008-PB... 29 9.9
AE014296-649|AAS64957.1| 4207|Drosophila melanogaster CG12008-PC... 29 9.9
AE013599-920|AAM68794.1| 766|Drosophila melanogaster CG18345-PC... 29 9.9
AE013599-918|AAM68793.1| 1124|Drosophila melanogaster CG18345-PB... 29 9.9
AE013599-917|AAF58904.1| 1124|Drosophila melanogaster CG18345-PA... 29 9.9
>AY118948-1|AAM50808.1| 265|Drosophila melanogaster LD32220p
protein.
Length = 265
Score = 74.9 bits (176), Expect = 1e-13
Identities = 45/134 (33%), Positives = 74/134 (55%), Gaps = 6/134 (4%)
Query: 84 EIL-KISKKYIFINQVDKSFHEAVDDLNQQDFIAVSGDGANMGRKCKMPFLVLSTDHQIY 142
EIL K + + I QVD ++H A+ D+ Q I++ + + GR LV++T + Y
Sbjct: 29 EILEKQLDRIVLIYQVDTTYHSALKDIKDQKIISLLVEPSFYGRHHPTSILVVATCNGTY 88
Query: 143 IFDIQVMQYHAFESGLKKILEGDSPKKIAHDCRKLSDCLYHKHNVKLKSVFDTQVGDLII 202
IFDI+ + E L KILE D P+K+ H +++D L H+ + L +FDT V + +
Sbjct: 89 IFDIKALGLIFLE--LAKILEADQPRKVIHYSHRIADHLLHRQRISLGGIFDTFVA-VCL 145
Query: 203 TKNKKV--TLPNKV 214
+ N ++ TLP +
Sbjct: 146 SSNTRIPYTLPEAI 159
>AE014296-2225|AAF49860.1| 265|Drosophila melanogaster CG11263-PA
protein.
Length = 265
Score = 74.9 bits (176), Expect = 1e-13
Identities = 45/134 (33%), Positives = 74/134 (55%), Gaps = 6/134 (4%)
Query: 84 EIL-KISKKYIFINQVDKSFHEAVDDLNQQDFIAVSGDGANMGRKCKMPFLVLSTDHQIY 142
EIL K + + I QVD ++H A+ D+ Q I++ + + GR LV++T + Y
Sbjct: 29 EILEKQLDRIVLIYQVDTTYHSALKDIKDQKIISLLVEPSFYGRHHPTSILVVATCNGTY 88
Query: 143 IFDIQVMQYHAFESGLKKILEGDSPKKIAHDCRKLSDCLYHKHNVKLKSVFDTQVGDLII 202
IFDI+ + E L KILE D P+K+ H +++D L H+ + L +FDT V + +
Sbjct: 89 IFDIKALGLIFLE--LAKILEADQPRKVIHYSHRIADHLLHRQRISLGGIFDTFVA-VCL 145
Query: 203 TKNKKV--TLPNKV 214
+ N ++ TLP +
Sbjct: 146 SSNTRIPYTLPEAI 159
>U86404-1|AAB49975.2| 993|Drosophila melanogaster egalitarian
protein.
Length = 993
Score = 60.9 bits (141), Expect = 2e-09
Identities = 38/131 (29%), Positives = 65/131 (49%), Gaps = 4/131 (3%)
Query: 110 NQQDFIAVSGDGANMGRKCKMPFLVLSTDH-QIYIFDIQVMQYHAFESGLKKILEGDSPK 168
N+ +++ +G N+G K ++ + + T + ++FD+Q + GLK +LE D
Sbjct: 542 NESIVVSLDCEGINLGLKGEITLIEIGTTRGEAFLFDVQSCPAMVTDGGLKTVLEHDQVI 601
Query: 169 KIAHDCRKLSDCLYHKHNVKLKSVFDTQVGDLII--TKNKKVTLPNKVRSLGECLTNYLG 226
K+ HDCR + LY + + L++VFDTQ I+ ++ K K SL Y
Sbjct: 602 KVIHDCRNDAANLYLQFGILLRNVFDTQAAHAILQYQESGKQVYKAKYISLNSLCEQY-N 660
Query: 227 LQQNTIDEKLK 237
N I ++LK
Sbjct: 661 APCNPIKDQLK 671
>BT009999-1|AAQ22468.1| 1004|Drosophila melanogaster RE33408p
protein.
Length = 1004
Score = 60.9 bits (141), Expect = 2e-09
Identities = 38/131 (29%), Positives = 65/131 (49%), Gaps = 4/131 (3%)
Query: 110 NQQDFIAVSGDGANMGRKCKMPFLVLSTDH-QIYIFDIQVMQYHAFESGLKKILEGDSPK 168
N+ +++ +G N+G K ++ + + T + ++FD+Q + GLK +LE D
Sbjct: 553 NESIVVSLDCEGINLGLKGEITLIEIGTTRGEAFLFDVQSCPAMVTDGGLKTVLEHDQVI 612
Query: 169 KIAHDCRKLSDCLYHKHNVKLKSVFDTQVGDLII--TKNKKVTLPNKVRSLGECLTNYLG 226
K+ HDCR + LY + + L++VFDTQ I+ ++ K K SL Y
Sbjct: 613 KVIHDCRNDAANLYLQFGILLRNVFDTQAAHAILQYQESGKQVYKAKYISLNSLCEQY-N 671
Query: 227 LQQNTIDEKLK 237
N I ++LK
Sbjct: 672 APCNPIKDQLK 682
>AE013599-3677|AAF47054.3| 885|Drosophila melanogaster CG4051-PA
protein.
Length = 885
Score = 60.9 bits (141), Expect = 2e-09
Identities = 38/131 (29%), Positives = 65/131 (49%), Gaps = 4/131 (3%)
Query: 110 NQQDFIAVSGDGANMGRKCKMPFLVLSTDH-QIYIFDIQVMQYHAFESGLKKILEGDSPK 168
N+ +++ +G N+G K ++ + + T + ++FD+Q + GLK +LE D
Sbjct: 553 NESIVVSLDCEGINLGLKGEITLIEIGTTRGEAFLFDVQSCPAMVTDGGLKTVLEHDQVI 612
Query: 169 KIAHDCRKLSDCLYHKHNVKLKSVFDTQVGDLII--TKNKKVTLPNKVRSLGECLTNYLG 226
K+ HDCR + LY + + L++VFDTQ I+ ++ K K SL Y
Sbjct: 613 KVIHDCRNDAANLYLQFGILLRNVFDTQAAHAILQYQESGKQVYKAKYISLNSLCEQY-N 671
Query: 227 LQQNTIDEKLK 237
N I ++LK
Sbjct: 672 APCNPIKDQLK 682
>BT023783-1|AAZ41792.1| 1072|Drosophila melanogaster LD13709p
protein.
Length = 1072
Score = 32.7 bits (71), Expect = 0.61
Identities = 38/150 (25%), Positives = 63/150 (42%), Gaps = 11/150 (7%)
Query: 29 AQDKTKISLYDVKEIPHGDANDGVLHYYDSEIREVVKLQ---ESTEKKVLKISQTKYEEI 85
A K +S D + I DA + RE +LQ +S EKK+ + K E
Sbjct: 582 AHGKKMLSKLDEEGIKKLDAEQIAKRESEELQREAKELQSKLKSQEKKIDYFERAKRLEE 641
Query: 86 LKISKKYIFINQV-DKSFHEAVDDLNQQDFIAVSGDGANMGRKCKMPFLVLSTDHQIYIF 144
+ + +KY+ QV DK F EA + ++ IA D + K + D ++
Sbjct: 642 IPLFEKYLAEKQVKDKEFWEATEKTRIENAIAERKDAVAQQERLKRMY----PDRDEFLE 697
Query: 145 DIQVMQYHAFESGLKKI---LEGDSPKKIA 171
++ + + LKK LE + K++A
Sbjct: 698 ALKKERASLYVEKLKKFEAALEAERKKRLA 727
>BT001505-1|AAN71260.1| 624|Drosophila melanogaster LD35838p
protein.
Length = 624
Score = 32.7 bits (71), Expect = 0.61
Identities = 38/150 (25%), Positives = 63/150 (42%), Gaps = 11/150 (7%)
Query: 29 AQDKTKISLYDVKEIPHGDANDGVLHYYDSEIREVVKLQ---ESTEKKVLKISQTKYEEI 85
A K +S D + I DA + RE +LQ +S EKK+ + K E
Sbjct: 134 AHGKKMLSKLDEEGIKKLDAEQIAKRESEELQREAKELQSKLKSQEKKIDYFERAKRLEE 193
Query: 86 LKISKKYIFINQV-DKSFHEAVDDLNQQDFIAVSGDGANMGRKCKMPFLVLSTDHQIYIF 144
+ + +KY+ QV DK F EA + ++ IA D + K + D ++
Sbjct: 194 IPLFEKYLAEKQVKDKEFWEATEKTRIENAIAERKDAVAQQERLKRMY----PDRDEFLE 249
Query: 145 DIQVMQYHAFESGLKKI---LEGDSPKKIA 171
++ + + LKK LE + K++A
Sbjct: 250 ALKKERASLYVEKLKKFEAALEAERKKRLA 279
>AY071601-1|AAL49223.1| 1140|Drosophila melanogaster RE65203p
protein.
Length = 1140
Score = 32.7 bits (71), Expect = 0.61
Identities = 38/150 (25%), Positives = 63/150 (42%), Gaps = 11/150 (7%)
Query: 29 AQDKTKISLYDVKEIPHGDANDGVLHYYDSEIREVVKLQ---ESTEKKVLKISQTKYEEI 85
A K +S D + I DA + RE +LQ +S EKK+ + K E
Sbjct: 650 AHGKKMLSKLDEEGIKKLDAEQIAKRESEELQREAKELQSKLKSQEKKIDYFERAKRLEE 709
Query: 86 LKISKKYIFINQV-DKSFHEAVDDLNQQDFIAVSGDGANMGRKCKMPFLVLSTDHQIYIF 144
+ + +KY+ QV DK F EA + ++ IA D + K + D ++
Sbjct: 710 IPLFEKYLAEKQVKDKEFWEATEKTRIENAIAERKDAVAQQERLKRMY----PDRDEFLE 765
Query: 145 DIQVMQYHAFESGLKKI---LEGDSPKKIA 171
++ + + LKK LE + K++A
Sbjct: 766 ALKKERASLYVEKLKKFEAALEAERKKRLA 795
>AE014297-92|AAN13317.2| 742|Drosophila melanogaster CG9805-PB,
isoform B protein.
Length = 742
Score = 32.7 bits (71), Expect = 0.61
Identities = 38/150 (25%), Positives = 63/150 (42%), Gaps = 11/150 (7%)
Query: 29 AQDKTKISLYDVKEIPHGDANDGVLHYYDSEIREVVKLQ---ESTEKKVLKISQTKYEEI 85
A K +S D + I DA + RE +LQ +S EKK+ + K E
Sbjct: 252 AHGKKMLSKLDEEGIKKLDAEQIAKRESEELQREAKELQSKLKSQEKKIDYFERAKRLEE 311
Query: 86 LKISKKYIFINQV-DKSFHEAVDDLNQQDFIAVSGDGANMGRKCKMPFLVLSTDHQIYIF 144
+ + +KY+ QV DK F EA + ++ IA D + K + D ++
Sbjct: 312 IPLFEKYLAEKQVKDKEFWEATEKTRIENAIAERKDAVAQQERLKRMY----PDRDEFLE 367
Query: 145 DIQVMQYHAFESGLKKI---LEGDSPKKIA 171
++ + + LKK LE + K++A
Sbjct: 368 ALKKERASLYVEKLKKFEAALEAERKKRLA 397
>AE014297-91|AAF52126.1| 1140|Drosophila melanogaster CG9805-PA,
isoform A protein.
Length = 1140
Score = 32.7 bits (71), Expect = 0.61
Identities = 38/150 (25%), Positives = 63/150 (42%), Gaps = 11/150 (7%)
Query: 29 AQDKTKISLYDVKEIPHGDANDGVLHYYDSEIREVVKLQ---ESTEKKVLKISQTKYEEI 85
A K +S D + I DA + RE +LQ +S EKK+ + K E
Sbjct: 650 AHGKKMLSKLDEEGIKKLDAEQIAKRESEELQREAKELQSKLKSQEKKIDYFERAKRLEE 709
Query: 86 LKISKKYIFINQV-DKSFHEAVDDLNQQDFIAVSGDGANMGRKCKMPFLVLSTDHQIYIF 144
+ + +KY+ QV DK F EA + ++ IA D + K + D ++
Sbjct: 710 IPLFEKYLAEKQVKDKEFWEATEKTRIENAIAERKDAVAQQERLKRMY----PDRDEFLE 765
Query: 145 DIQVMQYHAFESGLKKI---LEGDSPKKIA 171
++ + + LKK LE + K++A
Sbjct: 766 ALKKERASLYVEKLKKFEAALEAERKKRLA 795
>AF520715-1|AAM55244.1| 4723|Drosophila melanogaster MICAL long
isoform protein.
Length = 4723
Score = 29.9 bits (64), Expect = 4.3
Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 162 LEGDSPKKIAHDCRKLSDCLYHKHN-VKLKSVFDTQVGDLIITKN--KKVTLPNK 213
LE D+P+K + + +S+ LYH +N VK+ + + ++ +K+TL K
Sbjct: 1367 LERDAPRKFSSEIEAISEKLYHMNNMVKMNKDLEVLAKENLVKSGILRKLTLKEK 1421
>BT003178-1|AAO24933.1| 476|Drosophila melanogaster RH09265p
protein.
Length = 476
Score = 29.1 bits (62), Expect = 7.5
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 15 TKNYDVFEGRFYSMAQDKTKISLYDVKEIPH 45
T YDVF GR +D+ IS +D ++ H
Sbjct: 342 TDEYDVFLGRLLERVKDEKGISFHDFRDFCH 372
>U15974-1|AAA69929.1| 784|Drosophila melanogaster kinesin-like
protein protein.
Length = 784
Score = 28.7 bits (61), Expect = 9.9
Identities = 20/83 (24%), Positives = 38/83 (45%), Gaps = 4/83 (4%)
Query: 157 GLKKILEGDSPKKIAHDCRKLSDCLYHKHNVKLKSVFDTQVGDLIITKNKKVTLPNKV-- 214
G K +L+ S ++I + + + K ++++ + Q + + + V+L +V
Sbjct: 469 GGKNLLDTYSERQIELEKKLVEIAERKKREIEIQQQLELQEETTLEIRERNVSLEQEVEL 528
Query: 215 --RSLGECLTNYLGLQQNTIDEK 235
R L +C YL LQQ D K
Sbjct: 529 KKRKLSKCYAKYLALQQELNDCK 551
>U07629-1|AAA21249.2| 1494|Drosophila melanogaster
beta-heavy-spectrin protein.
Length = 1494
Score = 28.7 bits (61), Expect = 9.9
Identities = 25/112 (22%), Positives = 51/112 (45%), Gaps = 8/112 (7%)
Query: 1 MDNLYTKGELLQVHTKNYDVFEGRFYSMAQDKTKISLYDVKEIPHGDANDGVLHYYDSEI 60
+D Y + LQ + + F+ S + + + +++ + + GD H+ EI
Sbjct: 199 LDENYREPSNLQSKIQKHAAFDAELLSNSP-RVQSVIHEGERLIRGD------HFAKDEI 251
Query: 61 REVVKLQESTEKKVLKISQTKYEEILKISKKYIFINQVDKSFHEAVDDLNQQ 112
+ V+L E K+ SQTK +++ + F VD+ F+ +D++ Q
Sbjct: 252 AQQVQLLEGDWLKLKGASQTKKDKLQQAYDALAFNRSVDE-FNNWMDEVELQ 302
>M88185-1|AAA28979.1| 1124|Drosophila melanogaster
calmodulin-binding protein protein.
Length = 1124
Score = 28.7 bits (61), Expect = 9.9
Identities = 15/37 (40%), Positives = 24/37 (64%), Gaps = 2/37 (5%)
Query: 183 HKHNVKLKSVFDTQVGDLIITKNKKVTLPNKVRSLGE 219
HK NV L++ D+Q+G TKN++ +L N R++ E
Sbjct: 880 HKWNVVLRAAKDSQIGR--CTKNERKSLQNLGRAIEE 914
>BT001397-1|AAN71152.1| 845|Drosophila melanogaster GH05912p
protein.
Length = 845
Score = 28.7 bits (61), Expect = 9.9
Identities = 15/37 (40%), Positives = 24/37 (64%), Gaps = 2/37 (5%)
Query: 183 HKHNVKLKSVFDTQVGDLIITKNKKVTLPNKVRSLGE 219
HK NV L++ D+Q+G TKN++ +L N R++ E
Sbjct: 601 HKWNVVLRAAKDSQIGR--CTKNERKSLQNLGRAIEE 635
>AY119626-1|AAM50280.1| 1025|Drosophila melanogaster LP04011p
protein.
Length = 1025
Score = 28.7 bits (61), Expect = 9.9
Identities = 25/112 (22%), Positives = 51/112 (45%), Gaps = 8/112 (7%)
Query: 1 MDNLYTKGELLQVHTKNYDVFEGRFYSMAQDKTKISLYDVKEIPHGDANDGVLHYYDSEI 60
+D Y + LQ + + F+ S + + + +++ + + GD H+ EI
Sbjct: 430 LDENYREPSNLQSKIQKHAAFDAELLSNSP-RVQSVIHEGERLIRGD------HFAKDEI 482
Query: 61 REVVKLQESTEKKVLKISQTKYEEILKISKKYIFINQVDKSFHEAVDDLNQQ 112
+ V+L E K+ SQTK +++ + F VD+ F+ +D++ Q
Sbjct: 483 AQQVQLLEGDWLKLKGASQTKKDKLQQAYDALAFNRSVDE-FNNWMDEVELQ 533
>AY051583-1|AAK93007.1| 784|Drosophila melanogaster GH23075p
protein.
Length = 784
Score = 28.7 bits (61), Expect = 9.9
Identities = 20/83 (24%), Positives = 38/83 (45%), Gaps = 4/83 (4%)
Query: 157 GLKKILEGDSPKKIAHDCRKLSDCLYHKHNVKLKSVFDTQVGDLIITKNKKVTLPNKV-- 214
G K +L+ S ++I + + + K ++++ + Q + + + V+L +V
Sbjct: 469 GGKNLLDTYSERQIELEKKLVEIAERKKREIEIQQQLELQEETTLEIRERNVSLEQEVEL 528
Query: 215 --RSLGECLTNYLGLQQNTIDEK 235
R L +C YL LQQ D K
Sbjct: 529 KKRKLSKCYAKYLALQQELNDCK 551
>AE014296-2032|AAF50008.1| 784|Drosophila melanogaster CG7293-PA
protein.
Length = 784
Score = 28.7 bits (61), Expect = 9.9
Identities = 20/83 (24%), Positives = 38/83 (45%), Gaps = 4/83 (4%)
Query: 157 GLKKILEGDSPKKIAHDCRKLSDCLYHKHNVKLKSVFDTQVGDLIITKNKKVTLPNKV-- 214
G K +L+ S ++I + + + K ++++ + Q + + + V+L +V
Sbjct: 469 GGKNLLDTYSERQIELEKKLVEIAERKKREIEIQQQLELQEETTLEIRERNVSLEQEVEL 528
Query: 215 --RSLGECLTNYLGLQQNTIDEK 235
R L +C YL LQQ D K
Sbjct: 529 KKRKLSKCYAKYLALQQELNDCK 551
>AE014296-651|AAF47766.1| 4097|Drosophila melanogaster CG12008-PA,
isoform A protein.
Length = 4097
Score = 28.7 bits (61), Expect = 9.9
Identities = 25/112 (22%), Positives = 51/112 (45%), Gaps = 8/112 (7%)
Query: 1 MDNLYTKGELLQVHTKNYDVFEGRFYSMAQDKTKISLYDVKEIPHGDANDGVLHYYDSEI 60
+D Y + LQ + + F+ S + + + +++ + + GD H+ EI
Sbjct: 2802 LDENYREPSNLQSKIQKHAAFDAELLSNSP-RVQSVIHEGERLIRGD------HFAKDEI 2854
Query: 61 REVVKLQESTEKKVLKISQTKYEEILKISKKYIFINQVDKSFHEAVDDLNQQ 112
+ V+L E K+ SQTK +++ + F VD+ F+ +D++ Q
Sbjct: 2855 AQQVQLLEGDWLKLKGASQTKKDKLQQAYDALAFNRSVDE-FNNWMDEVELQ 2905
>AE014296-650|AAS64958.1| 4118|Drosophila melanogaster CG12008-PB,
isoform B protein.
Length = 4118
Score = 28.7 bits (61), Expect = 9.9
Identities = 25/112 (22%), Positives = 51/112 (45%), Gaps = 8/112 (7%)
Query: 1 MDNLYTKGELLQVHTKNYDVFEGRFYSMAQDKTKISLYDVKEIPHGDANDGVLHYYDSEI 60
+D Y + LQ + + F+ S + + + +++ + + GD H+ EI
Sbjct: 2802 LDENYREPSNLQSKIQKHAAFDAELLSNSP-RVQSVIHEGERLIRGD------HFAKDEI 2854
Query: 61 REVVKLQESTEKKVLKISQTKYEEILKISKKYIFINQVDKSFHEAVDDLNQQ 112
+ V+L E K+ SQTK +++ + F VD+ F+ +D++ Q
Sbjct: 2855 AQQVQLLEGDWLKLKGASQTKKDKLQQAYDALAFNRSVDE-FNNWMDEVELQ 2905
>AE014296-649|AAS64957.1| 4207|Drosophila melanogaster CG12008-PC,
isoform C protein.
Length = 4207
Score = 28.7 bits (61), Expect = 9.9
Identities = 25/112 (22%), Positives = 51/112 (45%), Gaps = 8/112 (7%)
Query: 1 MDNLYTKGELLQVHTKNYDVFEGRFYSMAQDKTKISLYDVKEIPHGDANDGVLHYYDSEI 60
+D Y + LQ + + F+ S + + + +++ + + GD H+ EI
Sbjct: 2802 LDENYREPSNLQSKIQKHAAFDAELLSNSP-RVQSVIHEGERLIRGD------HFAKDEI 2854
Query: 61 REVVKLQESTEKKVLKISQTKYEEILKISKKYIFINQVDKSFHEAVDDLNQQ 112
+ V+L E K+ SQTK +++ + F VD+ F+ +D++ Q
Sbjct: 2855 AQQVQLLEGDWLKLKGASQTKKDKLQQAYDALAFNRSVDE-FNNWMDEVELQ 2905
>AE013599-920|AAM68794.1| 766|Drosophila melanogaster CG18345-PC,
isoform C protein.
Length = 766
Score = 28.7 bits (61), Expect = 9.9
Identities = 15/37 (40%), Positives = 24/37 (64%), Gaps = 2/37 (5%)
Query: 183 HKHNVKLKSVFDTQVGDLIITKNKKVTLPNKVRSLGE 219
HK NV L++ D+Q+G TKN++ +L N R++ E
Sbjct: 522 HKWNVVLRAAKDSQIGR--CTKNERKSLQNLGRAIEE 556
>AE013599-918|AAM68793.1| 1124|Drosophila melanogaster CG18345-PB,
isoform B protein.
Length = 1124
Score = 28.7 bits (61), Expect = 9.9
Identities = 15/37 (40%), Positives = 24/37 (64%), Gaps = 2/37 (5%)
Query: 183 HKHNVKLKSVFDTQVGDLIITKNKKVTLPNKVRSLGE 219
HK NV L++ D+Q+G TKN++ +L N R++ E
Sbjct: 880 HKWNVVLRAAKDSQIGR--CTKNERKSLQNLGRAIEE 914
>AE013599-917|AAF58904.1| 1124|Drosophila melanogaster CG18345-PA,
isoform A protein.
Length = 1124
Score = 28.7 bits (61), Expect = 9.9
Identities = 15/37 (40%), Positives = 24/37 (64%), Gaps = 2/37 (5%)
Query: 183 HKHNVKLKSVFDTQVGDLIITKNKKVTLPNKVRSLGE 219
HK NV L++ D+Q+G TKN++ +L N R++ E
Sbjct: 880 HKWNVVLRAAKDSQIGR--CTKNERKSLQNLGRAIEE 914
Database: fruitfly
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 24,830,863
Number of sequences in database: 52,641
Lambda K H
0.317 0.135 0.378
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,432,712
Number of Sequences: 52641
Number of extensions: 540630
Number of successful extensions: 1809
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 1797
Number of HSP's gapped (non-prelim): 31
length of query: 290
length of database: 24,830,863
effective HSP length: 84
effective length of query: 206
effective length of database: 20,409,019
effective search space: 4204257914
effective search space used: 4204257914
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 61 (28.7 bits)
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