Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000990-TA|BGIBMGA000990-PA|IPR012337|Polynucleotidyl
transferase, Ribonuclease H fold
(290 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58745-2|AAU05593.1| 569|Caenorhabditis elegans Hypothetical pr... 61 8e-10
U58745-1|AAB00620.2| 574|Caenorhabditis elegans Hypothetical pr... 61 8e-10
U00055-3|AAA50723.3| 693|Caenorhabditis elegans Hypothetical pr... 35 0.078
U21317-6|AAA62527.1| 313|Caenorhabditis elegans Hypothetical pr... 31 0.95
Z81071-2|CAB03012.1| 618|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z46828-6|CAA86855.1| 1249|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z81541-1|CAB04411.1| 1291|Caenorhabditis elegans Hypothetical pr... 30 2.2
Z80220-2|CAD27608.1| 3185|Caenorhabditis elegans Hypothetical pr... 30 2.2
Z80220-1|CAB02304.1| 3212|Caenorhabditis elegans Hypothetical pr... 30 2.2
Z46828-8|CAE17900.1| 166|Caenorhabditis elegans Hypothetical pr... 30 2.2
L16621-14|AAA28224.3| 612|Caenorhabditis elegans Glycosylation ... 30 2.2
AL023832-3|CAE17976.1| 166|Caenorhabditis elegans Hypothetical ... 30 2.2
AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase... 30 2.2
AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase... 30 2.2
AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying de... 30 2.2
AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying de... 30 2.2
AF031833-1|AAC13669.1| 612|Caenorhabditis elegans GLY3 protein. 30 2.2
AC024783-3|AAL32245.1| 273|Caenorhabditis elegans Hypothetical ... 30 2.2
Z68159-5|CAA92288.2| 472|Caenorhabditis elegans Hypothetical pr... 29 2.9
AL132949-36|CAI70419.1| 466|Caenorhabditis elegans Hypothetical... 29 2.9
AL132949-35|CAB61101.3| 574|Caenorhabditis elegans Hypothetical... 29 2.9
U97193-11|AAB52436.1| 214|Caenorhabditis elegans Hypothetical p... 29 5.1
AF068713-17|AAC17790.1| 155|Caenorhabditis elegans Hypothetical... 29 5.1
AC006713-2|AAK68406.1| 310|Caenorhabditis elegans Hypothetical ... 29 5.1
Z93378-6|CAB07586.1| 1049|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z81457-11|CAB03818.1| 1049|Caenorhabditis elegans Hypothetical p... 28 6.7
U42841-12|AAC48169.2| 1030|Caenorhabditis elegans Gex interactin... 28 6.7
AF125463-4|AAD12862.1| 243|Caenorhabditis elegans Hypothetical ... 28 6.7
Z81449-11|CAD44106.2| 410|Caenorhabditis elegans Hypothetical p... 28 8.9
Z81449-10|CAB03766.4| 419|Caenorhabditis elegans Hypothetical p... 28 8.9
Z49889-5|CAA90070.1| 2207|Caenorhabditis elegans Hypothetical pr... 28 8.9
Z49868-5|CAA90032.1| 2207|Caenorhabditis elegans Hypothetical pr... 28 8.9
Z48241-6|CAD44100.2| 410|Caenorhabditis elegans Hypothetical pr... 28 8.9
Z48241-5|CAA88286.4| 419|Caenorhabditis elegans Hypothetical pr... 28 8.9
AY303576-1|AAP57298.1| 286|Caenorhabditis elegans cell death-re... 28 8.9
AF099000-3|AAC68731.1| 422|Caenorhabditis elegans Hypothetical ... 28 8.9
AF068711-2|AAC17776.1| 414|Caenorhabditis elegans Hypothetical ... 28 8.9
AF067621-1|AAC17540.2| 4368|Caenorhabditis elegans Hypothetical ... 28 8.9
AF036694-6|AAB88340.1| 286|Caenorhabditis elegans Cell-death-re... 28 8.9
>U58745-2|AAU05593.1| 569|Caenorhabditis elegans Hypothetical
protein C10G6.1b protein.
Length = 569
Score = 61.3 bits (142), Expect = 8e-10
Identities = 31/84 (36%), Positives = 48/84 (57%)
Query: 134 VLSTDHQIYIFDIQVMQYHAFESGLKKILEGDSPKKIAHDCRKLSDCLYHKHNVKLKSVF 193
V++T QI IFD+ ESG K ILE + K+ HD R+++ L HK+ V +++VF
Sbjct: 339 VIATTSQIGIFDLASSDVIILESGFKGILESEKVVKVIHDARRVASLLAHKYAVHMRNVF 398
Query: 194 DTQVGDLIITKNKKVTLPNKVRSL 217
DTQV ++ K N++R +
Sbjct: 399 DTQVAHSLLQHEKFNKSLNEMRPI 422
>U58745-1|AAB00620.2| 574|Caenorhabditis elegans Hypothetical
protein C10G6.1a protein.
Length = 574
Score = 61.3 bits (142), Expect = 8e-10
Identities = 31/84 (36%), Positives = 48/84 (57%)
Query: 134 VLSTDHQIYIFDIQVMQYHAFESGLKKILEGDSPKKIAHDCRKLSDCLYHKHNVKLKSVF 193
V++T QI IFD+ ESG K ILE + K+ HD R+++ L HK+ V +++VF
Sbjct: 339 VIATTSQIGIFDLASSDVIILESGFKGILESEKVVKVIHDARRVASLLAHKYAVHMRNVF 398
Query: 194 DTQVGDLIITKNKKVTLPNKVRSL 217
DTQV ++ K N++R +
Sbjct: 399 DTQVAHSLLQHEKFNKSLNEMRPI 422
>U00055-3|AAA50723.3| 693|Caenorhabditis elegans Hypothetical
protein R02F2.7 protein.
Length = 693
Score = 34.7 bits (76), Expect = 0.078
Identities = 24/83 (28%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Query: 168 KKIAHDCRK----LSDCLYHKHNVKLKSVFDTQVGDLIITKN-KKVTLPNKVRSLGECLT 222
K++A C+ +S C+Y+ L+S FD +LI +N K + L + L +
Sbjct: 274 KQLARRCQTAEVCMSPCIYYAMISVLRSTFDLNDSELIFIENLKTLKLKEITKHLPSIIN 333
Query: 223 NYLGLQQNTIDEKLKGLLHLAKF 245
+ +Q T +KLK L +L F
Sbjct: 334 SCSNTRQITASKKLKNLENLQDF 356
>U21317-6|AAA62527.1| 313|Caenorhabditis elegans Hypothetical
protein B0495.8a protein.
Length = 313
Score = 31.1 bits (67), Expect = 0.95
Identities = 36/148 (24%), Positives = 63/148 (42%), Gaps = 15/148 (10%)
Query: 5 YTKGELLQVHTKNYDVFEGRFYSMAQDKTKISLYDVKEIPHGDANDGVLHYYDSEIREVV 64
Y + + + H + D FE A I + V+E D DS+ ++V
Sbjct: 70 YERAQKEKDHFYDVDAFE--IIEHAVHLVDIEIAKVREKLEDDVKTQTSQAADSKAKQVA 127
Query: 65 KLQESTEKKVLKI----SQTKYEEILKISKKYIFINQVDKSFHEAVDDLNQQDFIAVSGD 120
+++E K V I ++ K EE +K+ K ++ ++ + E D Q + +G
Sbjct: 128 EIEEKIAKNVDDIEKLGNEGKIEESMKLHK---YVEELREKIQEIED---SQTEVKTAGP 181
Query: 121 GANMG--RKCKMPFLVLS-TDHQIYIFD 145
G+N R C+ L+ TDH+ I D
Sbjct: 182 GSNSAKLRVCEDCGAQLNITDHESRIAD 209
>Z81071-2|CAB03012.1| 618|Caenorhabditis elegans Hypothetical
protein F28F8.2 protein.
Length = 618
Score = 30.3 bits (65), Expect = 1.7
Identities = 22/79 (27%), Positives = 41/79 (51%), Gaps = 7/79 (8%)
Query: 30 QDKTKISLYDVKEIPHGDANDGVLHYYDSEIREVVKLQESTEKKVLKISQTKYEEILKIS 89
+D+ KI+ +K+ G+ HY ++ + V +++ +E + + K EI KIS
Sbjct: 547 EDEGKITAEHIKKA----CKRGMAHY---KVPKYVLIKKESEFPLTISGKVKKFEIQKIS 599
Query: 90 KKYIFINQVDKSFHEAVDD 108
K+ + + V F EAVD+
Sbjct: 600 KELLGLGTVKSHFTEAVDN 618
>Z46828-6|CAA86855.1| 1249|Caenorhabditis elegans Hypothetical
protein R03D7.1 protein.
Length = 1249
Score = 30.3 bits (65), Expect = 1.7
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Query: 237 KGLLHLAKFSRLNPEANLEASGYTVLKSVTESIVSLSATKLDVSCVYDDGSNIV 290
K + HL F + +AN+E G +S + V ++ K D V+D G NIV
Sbjct: 732 KAVAHLLPFMEIERQANIETMGLAEDESPYQGTVVIATVKGD---VHDIGKNIV 782
>Z81541-1|CAB04411.1| 1291|Caenorhabditis elegans Hypothetical protein
F48F5.1 protein.
Length = 1291
Score = 29.9 bits (64), Expect = 2.2
Identities = 15/43 (34%), Positives = 24/43 (55%)
Query: 66 LQESTEKKVLKISQTKYEEILKISKKYIFINQVDKSFHEAVDD 108
L STEK+VLK+ + + + Y+++N DK+ E DD
Sbjct: 1099 LHNSTEKRVLKVVDKTGKFPTRNVEHYLYLNWPDKNVPEGHDD 1141
>Z80220-2|CAD27608.1| 3185|Caenorhabditis elegans Hypothetical
protein T08G11.1b protein.
Length = 3185
Score = 29.9 bits (64), Expect = 2.2
Identities = 29/97 (29%), Positives = 49/97 (50%), Gaps = 12/97 (12%)
Query: 187 VKLKSVFDTQVGDLIITKNK---KVTLPNKVRSLGECLTNYLGLQQNTIDEKLKGLLHLA 243
+K+ + D+++T K+++P + +SL E +L L N ++L+G L
Sbjct: 871 LKMACKLQMRTFDMVVTAELGSIKISMP-EFKSLDE-KREHLYLIDN---DELQGALMTL 925
Query: 244 KFSRLNPEANLEASGYTVLKSVTESIVSLSATKLDVS 280
KF + NPE+ A+ Y ++TE V TKL VS
Sbjct: 926 KFVQANPESPFFATEY----ALTEQSVDFRFTKLAVS 958
>Z80220-1|CAB02304.1| 3212|Caenorhabditis elegans Hypothetical
protein T08G11.1a protein.
Length = 3212
Score = 29.9 bits (64), Expect = 2.2
Identities = 29/97 (29%), Positives = 49/97 (50%), Gaps = 12/97 (12%)
Query: 187 VKLKSVFDTQVGDLIITKNK---KVTLPNKVRSLGECLTNYLGLQQNTIDEKLKGLLHLA 243
+K+ + D+++T K+++P + +SL E +L L N ++L+G L
Sbjct: 871 LKMACKLQMRTFDMVVTAELGSIKISMP-EFKSLDE-KREHLYLIDN---DELQGALMTL 925
Query: 244 KFSRLNPEANLEASGYTVLKSVTESIVSLSATKLDVS 280
KF + NPE+ A+ Y ++TE V TKL VS
Sbjct: 926 KFVQANPESPFFATEY----ALTEQSVDFRFTKLAVS 958
>Z46828-8|CAE17900.1| 166|Caenorhabditis elegans Hypothetical
protein Y19D2B.2 protein.
Length = 166
Score = 29.9 bits (64), Expect = 2.2
Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 8/72 (11%)
Query: 54 HYYDSEIREVV--KLQESTEKKV----LKISQ--TKYEEILKISKKYIFINQVDKSFHEA 105
H+ DS R+ + ++Q+ ++K + ISQ +KYEE LK K+ N K F++
Sbjct: 94 HHVDSVSRKCLQERIQKLEQEKAALIEIMISQHKSKYEEKLKDKKEKRTSNYYKKHFNKF 153
Query: 106 VDDLNQQDFIAV 117
D N D+I++
Sbjct: 154 KKDENTYDYISI 165
>L16621-14|AAA28224.3| 612|Caenorhabditis elegans Glycosylation
related protein 3 protein.
Length = 612
Score = 29.9 bits (64), Expect = 2.2
Identities = 20/46 (43%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 176 KLSDCLYHKHNVKLKSVFDTQVGDLIITKNKK-VTLPNKVRSLGEC 220
KL C K NVK VFD Q G L+ K K VT ++ +L EC
Sbjct: 550 KLERCSVSKINVKHVFVFDDQAGTLLHKKTGKCVTGADQRVTLDEC 595
>AL023832-3|CAE17976.1| 166|Caenorhabditis elegans Hypothetical
protein Y19D2B.2 protein.
Length = 166
Score = 29.9 bits (64), Expect = 2.2
Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 8/72 (11%)
Query: 54 HYYDSEIREVV--KLQESTEKKV----LKISQ--TKYEEILKISKKYIFINQVDKSFHEA 105
H+ DS R+ + ++Q+ ++K + ISQ +KYEE LK K+ N K F++
Sbjct: 94 HHVDSVSRKCLQERIQKLEQEKAALIEIMISQHKSKYEEKLKDKKEKRTSNYYKKHFNKF 153
Query: 106 VDDLNQQDFIAV 117
D N D+I++
Sbjct: 154 KKDENTYDYISI 165
>AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase C
beta protein.
Length = 1418
Score = 29.9 bits (64), Expect = 2.2
Identities = 26/87 (29%), Positives = 47/87 (54%), Gaps = 13/87 (14%)
Query: 28 MAQDKTKISLYDVKEIPHGDANDGVLHYYDSEIREVVKLQEST------EKKVLKISQTK 81
+ Q +TK S+ D K I + G+ + + R V +L E E+K L + K
Sbjct: 1319 LKQTQTKKSMEDAKVI---QLDKGIKTKAERD-RRVKELNEKNLKMFVEERKRLAMKAQK 1374
Query: 82 YEEILKISKKYIF-INQVDKSFHEAVD 107
+EE +++K+++ + Q+DK FH+A+D
Sbjct: 1375 HEE--QLTKRHLDQLEQLDKDFHKALD 1399
>AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase C
beta homolog EGL-8 protein.
Length = 1431
Score = 29.9 bits (64), Expect = 2.2
Identities = 26/87 (29%), Positives = 47/87 (54%), Gaps = 13/87 (14%)
Query: 28 MAQDKTKISLYDVKEIPHGDANDGVLHYYDSEIREVVKLQEST------EKKVLKISQTK 81
+ Q +TK S+ D K I + G+ + + R V +L E E+K L + K
Sbjct: 1332 LKQTQTKKSMEDAKVI---QLDKGIKTKAERD-RRVKELNEKNLKMFVEERKRLAMKAQK 1387
Query: 82 YEEILKISKKYIF-INQVDKSFHEAVD 107
+EE +++K+++ + Q+DK FH+A+D
Sbjct: 1388 HEE--QLTKRHLDQLEQLDKDFHKALD 1412
>AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying
defective protein 8,isoform a protein.
Length = 1419
Score = 29.9 bits (64), Expect = 2.2
Identities = 26/87 (29%), Positives = 47/87 (54%), Gaps = 13/87 (14%)
Query: 28 MAQDKTKISLYDVKEIPHGDANDGVLHYYDSEIREVVKLQEST------EKKVLKISQTK 81
+ Q +TK S+ D K I + G+ + + R V +L E E+K L + K
Sbjct: 1320 LKQTQTKKSMEDAKVI---QLDKGIKTKAERD-RRVKELNEKNLKMFVEERKRLAMKAQK 1375
Query: 82 YEEILKISKKYIF-INQVDKSFHEAVD 107
+EE +++K+++ + Q+DK FH+A+D
Sbjct: 1376 HEE--QLTKRHLDQLEQLDKDFHKALD 1400
>AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying
defective protein 8,isoform b protein.
Length = 1431
Score = 29.9 bits (64), Expect = 2.2
Identities = 26/87 (29%), Positives = 47/87 (54%), Gaps = 13/87 (14%)
Query: 28 MAQDKTKISLYDVKEIPHGDANDGVLHYYDSEIREVVKLQEST------EKKVLKISQTK 81
+ Q +TK S+ D K I + G+ + + R V +L E E+K L + K
Sbjct: 1332 LKQTQTKKSMEDAKVI---QLDKGIKTKAERD-RRVKELNEKNLKMFVEERKRLAMKAQK 1387
Query: 82 YEEILKISKKYIF-INQVDKSFHEAVD 107
+EE +++K+++ + Q+DK FH+A+D
Sbjct: 1388 HEE--QLTKRHLDQLEQLDKDFHKALD 1412
>AF031833-1|AAC13669.1| 612|Caenorhabditis elegans GLY3 protein.
Length = 612
Score = 29.9 bits (64), Expect = 2.2
Identities = 20/46 (43%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 176 KLSDCLYHKHNVKLKSVFDTQVGDLIITKNKK-VTLPNKVRSLGEC 220
KL C K NVK VFD Q G L+ K K VT ++ +L EC
Sbjct: 550 KLERCSVSKINVKHVFVFDDQAGTLLHKKTGKCVTGADQRVTLDEC 595
>AC024783-3|AAL32245.1| 273|Caenorhabditis elegans Hypothetical
protein Y45G5AL.1a protein.
Length = 273
Score = 29.9 bits (64), Expect = 2.2
Identities = 20/89 (22%), Positives = 39/89 (43%), Gaps = 2/89 (2%)
Query: 4 LYTKGELLQVHTKNYDVFEGRFYSMAQDKTKISLYDVKEIPHGDANDGVLHYYDSEIREV 63
L +G + VH NYD +G + S D P GD ++ ++ E ++
Sbjct: 55 LQHQGFVNPVHEYNYDATDGPNMYPSDHHGMHS--DSASPPSGDFDEEIVEDEGREKEQL 112
Query: 64 VKLQESTEKKVLKISQTKYEEILKISKKY 92
+ EST+ ++ + QT + ++ +Y
Sbjct: 113 DNIVESTQHSIIAVGQTDVDGVIMPDTQY 141
>Z68159-5|CAA92288.2| 472|Caenorhabditis elegans Hypothetical
protein C33D9.5 protein.
Length = 472
Score = 29.5 bits (63), Expect = 2.9
Identities = 15/44 (34%), Positives = 24/44 (54%)
Query: 48 ANDGVLHYYDSEIREVVKLQESTEKKVLKISQTKYEEILKISKK 91
AND + Y SE + KL E + ++LK + K +E+ + KK
Sbjct: 268 ANDNMEKYKSSESERIQKLLEEQKAEILKEEEIKRKELSEQIKK 311
>AL132949-36|CAI70419.1| 466|Caenorhabditis elegans Hypothetical
protein Y53F4B.27b protein.
Length = 466
Score = 29.5 bits (63), Expect = 2.9
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 58 SEIREVVKLQESTEKKVLKISQTKYEEILKISKKYIFINQVDKSFHEAVDDLNQQDFIA 116
S+ R+ + + EK K + K EE+ K K ++ VD+ + VD++N + +A
Sbjct: 98 SKTRQKARSSVTLEKLAQKNQKMK-EELKKQEDKQAYLKNVDQQIAKVVDEVNAKQVVA 155
>AL132949-35|CAB61101.3| 574|Caenorhabditis elegans Hypothetical
protein Y53F4B.27a protein.
Length = 574
Score = 29.5 bits (63), Expect = 2.9
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 58 SEIREVVKLQESTEKKVLKISQTKYEEILKISKKYIFINQVDKSFHEAVDDLNQQDFIA 116
S+ R+ + + EK K + K EE+ K K ++ VD+ + VD++N + +A
Sbjct: 206 SKTRQKARSSVTLEKLAQKNQKMK-EELKKQEDKQAYLKNVDQQIAKVVDEVNAKQVVA 263
>U97193-11|AAB52436.1| 214|Caenorhabditis elegans Hypothetical
protein C06A5.2 protein.
Length = 214
Score = 28.7 bits (61), Expect = 5.1
Identities = 21/83 (25%), Positives = 39/83 (46%), Gaps = 5/83 (6%)
Query: 58 SEIREVVKLQESTEKKVLKISQTKYEEILKISKKYIFINQVDKSFHEAVDDLNQQDFIAV 117
+E++ K +E E+ QTK EE+ K + ++V+K + +N+ + +A+
Sbjct: 46 NEVQVEKKPEEVPEQNKSVKDQTKKEEV-----KVVEEDKVEKKVEQKKPIINRPNCVAI 100
Query: 118 SGDGANMGRKCKMPFLVLSTDHQ 140
+ A G+K K F D Q
Sbjct: 101 NPRSATSGKKNKYKFKYGQIDQQ 123
>AF068713-17|AAC17790.1| 155|Caenorhabditis elegans Hypothetical
protein T24A6.2 protein.
Length = 155
Score = 28.7 bits (61), Expect = 5.1
Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 2/77 (2%)
Query: 66 LQESTEKKVLKISQTKYEEILKISKKYIFINQVDKSFHEAVDDLNQQDFIAVSGDGANMG 125
L E T L +S +KY E LKI Y+F+ +E +++ ++F+ G G
Sbjct: 32 LSEPTRDGYL-LSPSKYLEKLKIFMPYVFLKNCSNG-NENGYEMDMKNFVVFFCPGVIFG 89
Query: 126 RKCKMPFLVLSTDHQIY 142
+K F ++I+
Sbjct: 90 KKFYQNFFHKGDPYEIF 106
>AC006713-2|AAK68406.1| 310|Caenorhabditis elegans Hypothetical
protein Y119D3A.3 protein.
Length = 310
Score = 28.7 bits (61), Expect = 5.1
Identities = 16/61 (26%), Positives = 32/61 (52%), Gaps = 6/61 (9%)
Query: 145 DIQVMQYHAFESGLKKILEGDSPKKIAHDCRKLSDCLYHKHNVKLKSV---FDTQVGDLI 201
D+++ Q HA ++ ILEG + + H L D L + N+ +K++ D + D++
Sbjct: 106 DLKIFQKHASCLMIQTILEGKDREYVVH---SLVDVLKEEENIHMKTIRLHHDLSIDDML 162
Query: 202 I 202
+
Sbjct: 163 L 163
>Z93378-6|CAB07586.1| 1049|Caenorhabditis elegans Hypothetical
protein C01G12.8 protein.
Length = 1049
Score = 28.3 bits (60), Expect = 6.7
Identities = 18/72 (25%), Positives = 34/72 (47%), Gaps = 8/72 (11%)
Query: 40 VKEIPHGDANDGVLHYYDSEIREVVKLQESTEKKVLKISQTKYE--EILKISKKYIFINQ 97
+ EIP N L + ++ + + + +K+LK+ T Y+ E +SKK+
Sbjct: 500 IGEIPFNSTNKYQLSIHPMSKKQNILVMKGAPEKILKLCSTYYQNGETKNVSKKF----- 554
Query: 98 VDKSFHEAVDDL 109
+K F +A + L
Sbjct: 555 -EKEFQQAYETL 565
>Z81457-11|CAB03818.1| 1049|Caenorhabditis elegans Hypothetical
protein C01G12.8 protein.
Length = 1049
Score = 28.3 bits (60), Expect = 6.7
Identities = 18/72 (25%), Positives = 34/72 (47%), Gaps = 8/72 (11%)
Query: 40 VKEIPHGDANDGVLHYYDSEIREVVKLQESTEKKVLKISQTKYE--EILKISKKYIFINQ 97
+ EIP N L + ++ + + + +K+LK+ T Y+ E +SKK+
Sbjct: 500 IGEIPFNSTNKYQLSIHPMSKKQNILVMKGAPEKILKLCSTYYQNGETKNVSKKF----- 554
Query: 98 VDKSFHEAVDDL 109
+K F +A + L
Sbjct: 555 -EKEFQQAYETL 565
>U42841-12|AAC48169.2| 1030|Caenorhabditis elegans Gex interacting
protein protein16, isoform d protein.
Length = 1030
Score = 28.3 bits (60), Expect = 6.7
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 7/60 (11%)
Query: 207 KVTLPNKVRSLGECLTNYLGLQQNTIDE-------KLKGLLHLAKFSRLNPEANLEASGY 259
KV P K RS+ + T +G N E +L+ HLAK+S ++E+S Y
Sbjct: 33 KVNEPKKYRSMDQLPTGKVGAPDNEKSEGTDPLHWQLRKDFHLAKYSERRASYHVESSSY 92
>AF125463-4|AAD12862.1| 243|Caenorhabditis elegans Hypothetical
protein Y49F6C.5 protein.
Length = 243
Score = 28.3 bits (60), Expect = 6.7
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 5/65 (7%)
Query: 185 HNVKLKSVFDTQVGDLIITKNKKVTLPNKVRSLG-ECLTNYLGLQQNTIDEKLKGLLHLA 243
H+ KS+F G + ++TL +++ S G +CL L + DE + G+LHLA
Sbjct: 139 HSSYFKSLF---FGSFAEAEKSEITL-SEINSAGFQCLLEVLYGESAIDDENVDGILHLA 194
Query: 244 KFSRL 248
+ +
Sbjct: 195 HMNEM 199
>Z81449-11|CAD44106.2| 410|Caenorhabditis elegans Hypothetical
protein C32A3.3b protein.
Length = 410
Score = 27.9 bits (59), Expect = 8.9
Identities = 15/55 (27%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Query: 57 DSEIREVVKLQESTEKKVLKISQTKYEEILKISKKYIFINQVDKSFHEAVDDLNQ 111
D E E+++L ++ E+ + Q K++ + K + QV+K++ + +DDL Q
Sbjct: 56 DRENEEIMRLSKAVER----LEQEKHQRNQQHLKFEEELEQVEKTYRKDIDDLQQ 106
>Z81449-10|CAB03766.4| 419|Caenorhabditis elegans Hypothetical
protein C32A3.3a protein.
Length = 419
Score = 27.9 bits (59), Expect = 8.9
Identities = 15/55 (27%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Query: 57 DSEIREVVKLQESTEKKVLKISQTKYEEILKISKKYIFINQVDKSFHEAVDDLNQ 111
D E E+++L ++ E+ + Q K++ + K + QV+K++ + +DDL Q
Sbjct: 65 DRENEEIMRLSKAVER----LEQEKHQRNQQHLKFEEELEQVEKTYRKDIDDLQQ 115
>Z49889-5|CAA90070.1| 2207|Caenorhabditis elegans Hypothetical protein
W07E11.1 protein.
Length = 2207
Score = 27.9 bits (59), Expect = 8.9
Identities = 26/102 (25%), Positives = 46/102 (45%), Gaps = 4/102 (3%)
Query: 23 GRFYSMAQDKTKISLYDVKEIPHGDANDGVLHYYDSEIREVVKLQES-TEKKVLKISQTK 81
G Y AQ+ L + + DA+ L + ++I E VKL S +++L Q +
Sbjct: 1487 GIAYLFAQEDNFSRLINAATVDLDDASTEDLIFVKAKIEEFVKLTGSELGQRILTNWQKE 1546
Query: 82 YEEILKI---SKKYIFINQVDKSFHEAVDDLNQQDFIAVSGD 120
+++I+K+ K + Q + +A D QD +S D
Sbjct: 1547 HQKIIKVFPRDYKRVLAEQEEARKKQAELDKANQDMSLLSVD 1588
>Z49868-5|CAA90032.1| 2207|Caenorhabditis elegans Hypothetical protein
W07E11.1 protein.
Length = 2207
Score = 27.9 bits (59), Expect = 8.9
Identities = 26/102 (25%), Positives = 46/102 (45%), Gaps = 4/102 (3%)
Query: 23 GRFYSMAQDKTKISLYDVKEIPHGDANDGVLHYYDSEIREVVKLQES-TEKKVLKISQTK 81
G Y AQ+ L + + DA+ L + ++I E VKL S +++L Q +
Sbjct: 1487 GIAYLFAQEDNFSRLINAATVDLDDASTEDLIFVKAKIEEFVKLTGSELGQRILTNWQKE 1546
Query: 82 YEEILKI---SKKYIFINQVDKSFHEAVDDLNQQDFIAVSGD 120
+++I+K+ K + Q + +A D QD +S D
Sbjct: 1547 HQKIIKVFPRDYKRVLAEQEEARKKQAELDKANQDMSLLSVD 1588
>Z48241-6|CAD44100.2| 410|Caenorhabditis elegans Hypothetical
protein C32A3.3b protein.
Length = 410
Score = 27.9 bits (59), Expect = 8.9
Identities = 15/55 (27%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Query: 57 DSEIREVVKLQESTEKKVLKISQTKYEEILKISKKYIFINQVDKSFHEAVDDLNQ 111
D E E+++L ++ E+ + Q K++ + K + QV+K++ + +DDL Q
Sbjct: 56 DRENEEIMRLSKAVER----LEQEKHQRNQQHLKFEEELEQVEKTYRKDIDDLQQ 106
>Z48241-5|CAA88286.4| 419|Caenorhabditis elegans Hypothetical
protein C32A3.3a protein.
Length = 419
Score = 27.9 bits (59), Expect = 8.9
Identities = 15/55 (27%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Query: 57 DSEIREVVKLQESTEKKVLKISQTKYEEILKISKKYIFINQVDKSFHEAVDDLNQ 111
D E E+++L ++ E+ + Q K++ + K + QV+K++ + +DDL Q
Sbjct: 65 DRENEEIMRLSKAVER----LEQEKHQRNQQHLKFEEELEQVEKTYRKDIDDLQQ 115
>AY303576-1|AAP57298.1| 286|Caenorhabditis elegans cell
death-related nuclease 2 protein.
Length = 286
Score = 27.9 bits (59), Expect = 8.9
Identities = 13/39 (33%), Positives = 22/39 (56%)
Query: 139 HQIYIFDIQVMQYHAFESGLKKILEGDSPKKIAHDCRKL 177
H Y D+ + A ++GL KI+ + +KI+H+C L
Sbjct: 15 HPSYQKDLNDVLDRAKQAGLSKIMVTGTSEKISHECADL 53
>AF099000-3|AAC68731.1| 422|Caenorhabditis elegans Hypothetical
protein Y47G7B.2 protein.
Length = 422
Score = 27.9 bits (59), Expect = 8.9
Identities = 10/29 (34%), Positives = 23/29 (79%), Gaps = 1/29 (3%)
Query: 71 EKKVLKISQTKYEEILKISKKY-IFINQV 98
EK++ K+S+++Y ++LK+ +K+ +I Q+
Sbjct: 311 EKEIQKLSESEYRDLLKLLEKFQTYIQQI 339
>AF068711-2|AAC17776.1| 414|Caenorhabditis elegans Hypothetical
protein R09A1.2 protein.
Length = 414
Score = 27.9 bits (59), Expect = 8.9
Identities = 18/90 (20%), Positives = 41/90 (45%)
Query: 62 EVVKLQESTEKKVLKISQTKYEEILKISKKYIFINQVDKSFHEAVDDLNQQDFIAVSGDG 121
E+V LQE EK+++++++ ++L + + S + D + +D +++ D
Sbjct: 160 EIVTLQEDVEKRLVELAKGNCVDVLNLVTANLKTIPHSPSTILLISDESVRDIVSILHDT 219
Query: 122 ANMGRKCKMPFLVLSTDHQIYIFDIQVMQY 151
+ R L LST+ I ++ +
Sbjct: 220 YSTNRLSYEEILSLSTNTVITCLSARIPDF 249
>AF067621-1|AAC17540.2| 4368|Caenorhabditis elegans Hypothetical
protein F55F10.1 protein.
Length = 4368
Score = 27.9 bits (59), Expect = 8.9
Identities = 25/100 (25%), Positives = 50/100 (50%), Gaps = 11/100 (11%)
Query: 189 LKSVFDTQVGDLIITKNKKVTLPNKVRSLGEC----LTNYLGLQ--QNTIDEKLKG---- 238
++S+F+ + + ++TK +T+ K +G+C T LG+Q + +++ +L
Sbjct: 1587 MRSIFEKMMEEKLVTKALNLTVDEKEMRIGKCSLKRKTQQLGVQSPRKSLENRLFASQTI 1646
Query: 239 LLH-LAKFSRLNPEANLEASGYTVLKSVTESIVSLSATKL 277
L+H +A LN A L +SV E++ +L +L
Sbjct: 1647 LMHQIATCVELNWLALLVGPRNCGKRSVIENVANLCGKRL 1686
>AF036694-6|AAB88340.1| 286|Caenorhabditis elegans
Cell-death-related nuclease protein2 protein.
Length = 286
Score = 27.9 bits (59), Expect = 8.9
Identities = 13/39 (33%), Positives = 22/39 (56%)
Query: 139 HQIYIFDIQVMQYHAFESGLKKILEGDSPKKIAHDCRKL 177
H Y D+ + A ++GL KI+ + +KI+H+C L
Sbjct: 15 HPSYQKDLNDVLDRAKQAGLSKIMVTGTSEKISHECADL 53
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.317 0.135 0.378
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,002,627
Number of Sequences: 27539
Number of extensions: 285926
Number of successful extensions: 989
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 32
Number of HSP's that attempted gapping in prelim test: 982
Number of HSP's gapped (non-prelim): 39
length of query: 290
length of database: 12,573,161
effective HSP length: 81
effective length of query: 209
effective length of database: 10,342,502
effective search space: 2161582918
effective search space used: 2161582918
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 59 (27.9 bits)
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