GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000989-TA|BGIBMGA000989-PA|IPR000834|Peptidase M14,
carboxypeptidase A
         (666 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    23   8.9  
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    23   8.9  

>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
          protein.
          Length = 533

 Score = 22.6 bits (46), Expect = 8.9
 Identities = 8/17 (47%), Positives = 11/17 (64%)

Query: 40 EIDTDENTFRTIAKLKE 56
          E+D D+N FR    LK+
Sbjct: 74 ELDVDQNGFRNFTNLKK 90


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 22.6 bits (46), Expect = 8.9
 Identities = 10/32 (31%), Positives = 15/32 (46%)

Query: 99  PYYSPSGKELNPQPVGEEAGTVTFQYYPMSAV 130
           P Y P+   ++P P    AG +   Y P+  V
Sbjct: 149 PKYEPNPSIIDPGPALPPAGFLCNNYLPLPQV 180


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.319    0.134    0.406 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,968
Number of Sequences: 317
Number of extensions: 7658
Number of successful extensions: 23
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 21
Number of HSP's gapped (non-prelim): 2
length of query: 666
length of database: 114,650
effective HSP length: 61
effective length of query: 605
effective length of database: 95,313
effective search space: 57664365
effective search space used: 57664365
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 46 (22.6 bits)