Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000989-TA|BGIBMGA000989-PA|IPR000834|Peptidase M14,
carboxypeptidase A
(666 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC31F12.01 |zds1|SPAC637.14, mug88|zds family protein Zds1|Sch... 29 2.7
SPAC6C3.07 |mug68||sequence orphan|Schizosaccharomyces pombe|chr... 28 3.6
SPBC8D2.07c |sfc9||transcription factor TFIIIC complex subunit S... 28 4.8
SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces... 28 4.8
SPBC16A3.18 |cip1||RNA-binding protein Cip1|Schizosaccharomyces ... 27 6.3
SPCC1919.11 |mug137||BAR adaptor protein|Schizosaccharomyces pom... 27 6.3
SPAC3H8.09c |nab3||poly|Schizosaccharomyces pombe|chr 1|||Manual 27 8.4
SPBC354.13 |rga6||GTPase activating protein Rga6|Schizosaccharom... 27 8.4
SPAC22E12.14c |sck2||serine/threonine protein kinase Sck2|Schizo... 27 8.4
SPBC582.10c |||ATP-dependent DNA helicase Rhp16b |Schizosaccharo... 27 8.4
>SPAC31F12.01 |zds1|SPAC637.14, mug88|zds family protein
Zds1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 938
Score = 28.7 bits (61), Expect = 2.7
Identities = 26/117 (22%), Positives = 48/117 (41%), Gaps = 3/117 (2%)
Query: 256 NDPQNEEEEQFPSYTLTFNLEFPHTDDAVYIAHCYPYTYSDLQEYLSRLQSHPVKSTFTK 315
N+ NE + + T + N E +D+ A ++S++ + +S + + T T
Sbjct: 88 NENNNENDTTEEAETSSGN-EAADDEDSSSDAQSSVPSFSEIHDGMSEEELDKERKTLTH 146
Query: 316 LRLLCRTLAGNNVYYLTITSPPNSNEIEQKKKKAVVITARVHPGETPSSWMMKGFMD 372
LR + A + + + E EQ + A +HP P+ W K F+D
Sbjct: 147 LRRISLQGADDPEIPTDWSVAMSPPETEQDASTLFWVPANLHPELNPTGW--KSFLD 201
>SPAC6C3.07 |mug68||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 515
Score = 28.3 bits (60), Expect = 3.6
Identities = 14/42 (33%), Positives = 21/42 (50%)
Query: 547 YESLGRMFCETLLDFYDEDPSKERLRNKIVTRLLKEGSNADE 588
YE L F L+ Y+ E+LR K + R LK+ + D+
Sbjct: 346 YERLANSFSFNALNDYNLKKGGEKLRKKAIKRALKDRGSQDK 387
>SPBC8D2.07c |sfc9||transcription factor TFIIIC complex subunit Sfc9
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 673
Score = 27.9 bits (59), Expect = 4.8
Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Query: 86 RIHHITWSPATPEPYYSPSGKELNPQPVGEEAGTVTFQYYPMSAVNYF 133
RIH + WSP P SP G L +G E+G V S+ +F
Sbjct: 143 RIHSVAWSPLVSLPSSSPWGVCL--FALGAESGHVHLSIMSHSSTPFF 188
>SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1526
Score = 27.9 bits (59), Expect = 4.8
Identities = 34/154 (22%), Positives = 67/154 (43%), Gaps = 14/154 (9%)
Query: 271 LTFNLEFPHTDDAVYIAHCYPYTYSDLQEYLSRLQSHPVKSTFTK--LRLLC-RTLAGNN 327
+T+NLE + D +Y TYS L +L + + +TK ++L +T
Sbjct: 93 VTYNLEQRYLSDQIY-------TYSGL--FLVAVNPYCGLPIYTKDIIQLYKDKTQERKL 143
Query: 328 VYYLTITSPPNSNEIEQKKKKAVVITARVHPGETPSSWMMKGFMDYLTGDSNQARELREK 387
+ I +N +E K+ +++++T G+T ++ + ++ + + E+
Sbjct: 144 PHVFAIADLAYNNLLENKENQSILVTGESGAGKTENTKRIIQYLAAIASSTTVGSSQVEE 203
Query: 388 FIFKLVPMLNPDG--VIVGNNRCSLTGKDLNRQY 419
I K P+L G V NN S GK + ++
Sbjct: 204 QIIKTNPVLESFGNARTVRNNNSSRFGKFIKVEF 237
>SPBC16A3.18 |cip1||RNA-binding protein Cip1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 490
Score = 27.5 bits (58), Expect = 6.3
Identities = 12/26 (46%), Positives = 17/26 (65%)
Query: 156 ELKFESRFESGNLAKAIRITNAYYEL 181
E+ FE+ + GNL AIRI Y++L
Sbjct: 344 EITFETTSKDGNLLNAIRIFCLYFDL 369
>SPCC1919.11 |mug137||BAR adaptor protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 420
Score = 27.5 bits (58), Expect = 6.3
Identities = 13/24 (54%), Positives = 15/24 (62%)
Query: 217 SKAESLYNEGMRPLLYSTKDAQLH 240
SKAE L N GM P+ Y T+ LH
Sbjct: 324 SKAEKLGNSGMFPVNYCTRIYDLH 347
>SPAC3H8.09c |nab3||poly|Schizosaccharomyces pombe|chr 1|||Manual
Length = 738
Score = 27.1 bits (57), Expect = 8.4
Identities = 10/22 (45%), Positives = 14/22 (63%)
Query: 88 HHITWSPATPEPYYSPSGKELN 109
HH +P++PE YSP +LN
Sbjct: 291 HHNPQTPSSPESAYSPENLQLN 312
>SPBC354.13 |rga6||GTPase activating protein
Rga6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 733
Score = 27.1 bits (57), Expect = 8.4
Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Query: 62 ALPKELDCPQQAPRWPSECQVVEERIHHITWSPATPEPYYSPSGKELNPQPVGEEAGTV 120
A+PKE D P+Q P + + + HI+ P + + SG + N V E+ V
Sbjct: 573 AVPKE-DSPEQIPENVNASEESYPNVKHISKLPLINDSSDNESGNQENDDAVANESTKV 630
>SPAC22E12.14c |sck2||serine/threonine protein kinase
Sck2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 646
Score = 27.1 bits (57), Expect = 8.4
Identities = 12/38 (31%), Positives = 24/38 (63%)
Query: 612 GVMREKVNSTQTAPPPSPIIFPDINVNTEEVKICNKNI 649
G+ +K+ + + +PP PI+ +I+V+ +V+ NK I
Sbjct: 529 GIDWKKLAAKEISPPFKPIVEGEIDVSNFDVEFTNKAI 566
>SPBC582.10c |||ATP-dependent DNA helicase Rhp16b
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 830
Score = 27.1 bits (57), Expect = 8.4
Identities = 26/120 (21%), Positives = 51/120 (42%), Gaps = 5/120 (4%)
Query: 305 QSHPVKSTFTKLRLLCRTLAGNNVYYLTITSPPNSNEIEQKKKKAVVITARVHPGETPSS 364
++H +K+ +K L C L G N + LT T P N +++ ++V ++P S
Sbjct: 385 EAHTIKNKSSKSALACCALQGINRWCLTGT--PLQNNVDE--LYSLVKFLHINPFNDQSV 440
Query: 365 WMMKGFMDYLTGDSNQARELREKFIFKLVPMLNPDGVIVGNNRCSLTGKDLNRQYRTVIR 424
W + + G+ N + R + + ++ + ++ N TG L R V +
Sbjct: 441 WKDQISLPLCQGEENLVFK-RLRMLLSVIMLRRTKTLLEANAGKDGTGGALKLSKRLVYK 499
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.319 0.134 0.406
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,207,473
Number of Sequences: 5004
Number of extensions: 143251
Number of successful extensions: 353
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 347
Number of HSP's gapped (non-prelim): 11
length of query: 666
length of database: 2,362,478
effective HSP length: 77
effective length of query: 589
effective length of database: 1,977,170
effective search space: 1164553130
effective search space used: 1164553130
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 57 (27.1 bits)
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