Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000988-TA|BGIBMGA000988-PA|IPR007087|Zinc finger,
C2H2-type
(576 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g06634.1 68417.m01050 zinc finger (C2H2 type) family protein ... 61 2e-09
At1g72050.2 68414.m08328 zinc finger (C2H2 type) family protein ... 47 4e-05
At3g48430.1 68416.m05287 zinc finger (C2H2 type) family protein ... 46 5e-05
At5g04240.1 68418.m00414 zinc finger (C2H2 type) family protein ... 43 6e-04
At1g72050.1 68414.m08329 zinc finger (C2H2 type) family protein ... 42 0.001
At1g68130.1 68414.m07782 zinc finger (C2H2 type) family protein ... 42 0.001
At1g26590.1 68414.m03239 zinc finger (C2H2 type) family protein ... 38 0.018
At2g01940.1 68415.m00129 zinc finger (C2H2 type) family protein ... 38 0.024
At1g25250.1 68414.m03133 zinc finger (C2H2 type) family protein ... 38 0.024
At3g45260.1 68416.m04887 zinc finger (C2H2 type) family protein ... 37 0.032
At5g22920.1 68418.m02680 zinc finger (C3HC4-type RING finger) fa... 37 0.042
At2g02070.1 68415.m00143 zinc finger (C2H2 type) family protein ... 37 0.042
At2g47090.1 68415.m05882 zinc finger (C2H2 type) family protein ... 36 0.097
At2g02080.1 68415.m00144 zinc finger (C2H2 type) family protein ... 36 0.097
At3g29340.1 68416.m03684 zinc finger (C2H2 type) family protein ... 35 0.13
At1g14580.1 68414.m01734 zinc finger (C2H2 type) family protein ... 35 0.17
At5g66730.1 68418.m08412 zinc finger (C2H2 type) family protein ... 34 0.22
At5g44160.1 68418.m05404 zinc finger (C2H2 type) family protein ... 34 0.22
At5g03150.1 68418.m00263 zinc finger (C2H2 type) family protein ... 34 0.22
At3g57670.1 68416.m06425 zinc finger (C2H2 type) protein (WIP2) ... 34 0.22
At3g50700.1 68416.m05547 zinc finger (C2H2 type) family protein ... 34 0.30
At2g41940.1 68415.m05188 zinc finger (C2H2 type) family protein ... 34 0.30
At1g03840.1 68414.m00365 zinc finger (C2H2 type) family protein ... 34 0.30
At5g63280.1 68418.m07942 zinc finger (C2H2 type) family protein ... 33 0.39
At1g55110.1 68414.m06294 zinc finger (C2H2 type) family protein ... 33 0.39
At1g46408.1 68414.m05212 MADS-box family protein contains simila... 33 0.39
At3g13810.1 68416.m01744 zinc finger (C2H2 type) family protein ... 33 0.52
At2g37430.1 68415.m04590 zinc finger (C2H2 type) family protein ... 33 0.52
At2g23740.1 68415.m02834 zinc finger (C2H2 type) family protein ... 33 0.52
At1g30970.1 68414.m03792 zinc finger (C2H2 type) family protein ... 33 0.52
At5g56200.1 68418.m07012 zinc finger (C2H2 type) family protein ... 32 0.90
At5g54360.1 68418.m06769 zinc finger (C2H2 type) family protein-... 32 0.90
At3g60380.1 68416.m06753 expressed protein 32 0.90
At1g27730.1 68414.m03389 zinc finger (C2H2 type) family protein ... 32 0.90
At4g03270.1 68417.m00446 cyclin family protein similar to CycD3;... 32 1.2
At1g65130.1 68414.m07384 ubiquitin carboxyl-terminal hydrolase-r... 32 1.2
At1g31150.1 68414.m03811 expressed protein EST gb|Z33866 comes f... 32 1.2
At5g22890.1 68418.m02677 zinc finger (C2H2 type) family protein ... 31 1.6
At4g02670.1 68417.m00362 zinc finger (C2H2 type) family protein ... 31 1.6
At3g20880.1 68416.m02640 zinc finger (C2H2 type) protein (WIP4) ... 31 1.6
At2g31760.1 68415.m03878 zinc finger protein-related contains lo... 31 1.6
At1g51220.1 68414.m05761 zinc finger (C2H2 type) protein (WIP5) ... 31 1.6
At5g43170.1 68418.m05269 zinc finger (C2H2 type) protein 3 (AZF3... 31 2.1
At4g14990.1 68417.m02303 expressed protein 31 2.1
At3g27480.1 68416.m03436 DC1 domain-containing protein contains ... 31 2.1
At1g34370.2 68414.m04268 zinc finger (C2H2 type) family protein ... 31 2.1
At1g34370.1 68414.m04267 zinc finger (C2H2 type) family protein ... 31 2.1
At1g17050.1 68414.m02073 geranyl diphosphate synthase, putative ... 31 2.1
At1g06670.1 68414.m00707 DEIH-box RNA/DNA helicase identical to ... 31 2.1
At4g31420.2 68417.m04461 zinc finger (C2H2 type) family protein ... 31 2.8
At4g31420.1 68417.m04460 zinc finger (C2H2 type) family protein ... 31 2.8
At3g19580.1 68416.m02483 zinc finger (C2H2 type) protein 2 (AZF2... 31 2.8
At2g01980.1 68415.m00133 sodium proton exchanger, putative (NHX7... 31 2.8
At1g67560.1 68414.m07697 lipoxygenase family protein similar to ... 31 2.8
At2g41835.1 68415.m05170 zinc finger (C2H2 type, AN1-like) famil... 30 3.6
At1g26610.1 68414.m03241 zinc finger (C2H2 type) family protein ... 30 3.6
At5g61470.1 68418.m07713 zinc finger (C2H2 type) family protein ... 30 4.8
At4g16610.1 68417.m02512 zinc finger (C2H2 type) family protein ... 30 4.8
At2g42400.1 68415.m05248 expressed protein 30 4.8
At2g17180.1 68415.m01984 zinc finger (C2H2 type) family protein ... 30 4.8
At1g02030.1 68414.m00123 zinc finger (C2H2 type) family protein ... 30 4.8
At5g16680.1 68418.m01951 PHD finger family protein contains Pfam... 29 6.4
At5g06650.1 68418.m00751 zinc finger (C2H2 type) family protein ... 29 6.4
At5g04340.1 68418.m00426 zinc finger (C2H2 type) family protein ... 29 6.4
At2g43220.1 68415.m05372 DC1 domain-containing protein contains ... 29 6.4
At2g26940.1 68415.m03231 zinc finger (C2H2 type) family protein ... 29 6.4
At1g68480.1 68414.m07823 zinc finger (C2H2 type) family protein ... 29 6.4
At1g08290.1 68414.m00915 zinc finger (C2H2 type) protein (WIP3) ... 29 6.4
At5g54050.1 68418.m06722 DC1 domain-containing protein 29 8.4
At5g42840.1 68418.m05221 DC1 domain-containing protein contains ... 29 8.4
At5g38810.1 68418.m04693 F-box family protein predicted proteins... 29 8.4
At5g16270.1 68418.m01900 Rad21/Rec8-like family protein weak sim... 29 8.4
At4g19660.1 68417.m02888 ankyrin repeat family protein / BTB/POZ... 29 8.4
At3g49930.1 68416.m05460 zinc finger (C2H2 type) family protein ... 29 8.4
At3g27473.1 68416.m03434 DC1 domain-containing protein contains ... 29 8.4
At3g24240.1 68416.m03042 leucine-rich repeat transmembrane prote... 29 8.4
At2g13900.1 68415.m01542 DC1 domain-containing protein contains ... 29 8.4
At1g67970.1 68414.m07764 heat shock factor protein, putative (HS... 29 8.4
At1g34790.1 68414.m04337 transparent testa 1 protein (TT1) / zin... 29 8.4
>At4g06634.1 68417.m01050 zinc finger (C2H2 type) family protein
contains Pfam PF00096: Zinc finger, C2H2 type
Length = 387
Score = 61.3 bits (142), Expect = 2e-09
Identities = 41/114 (35%), Positives = 58/114 (50%), Gaps = 11/114 (9%)
Query: 401 ARQREEEKNKQVLVSEDDPTK---FVCRV--CSKNFSLQRLLNRHMKCHSDVKRYLCTF- 454
+R +E+EK V E +PT F+C C K F L +H H + ++Y+C
Sbjct: 55 SRLKEKEKEPDVPEPEPEPTTEILFLCSYDGCGKTFFDVSALRKHSHIHGE-RQYVCDQE 113
Query: 455 -CGKGFNDTFDLKRHTRTHTGVRPYKCNL--CEKSFTQRCSLESHCLKVHGVQH 505
CGK F D+ LKRH HTG R Y C C K+F+ +L SH +K H ++
Sbjct: 114 GCGKKFLDSSKLKRHYLIHTGERNYICTYEGCGKAFSLDFNLRSH-MKTHSQEN 166
Score = 51.6 bits (118), Expect = 1e-06
Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 6/87 (6%)
Query: 421 KFVC--RVCSKNFSLQRLLNRHMKCHSDVKRYLCTF--CGKGFNDTFDLKRHTRTHTGVR 476
++VC C K F L RH H+ + Y+CT+ CGK F+ F+L+ H +TH+
Sbjct: 107 QYVCDQEGCGKKFLDSSKLKRHYLIHTGERNYICTYEGCGKAFSLDFNLRSHMKTHSQEN 166
Query: 477 PYKC--NLCEKSFTQRCSLESHCLKVH 501
+ C + C K + L++H H
Sbjct: 167 YHICPYSGCVKRYAHEYKLKNHVAAYH 193
Score = 35.9 bits (79), Expect = 0.073
Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 4/72 (5%)
Query: 405 EEEKNKQVLVSEDDPTKFVCRV--CSKNFSLQRLLNRHMKCHSDVKRYLCTF--CGKGFN 460
+ K K+ + ++C C K FSL L HMK HS ++C + C K +
Sbjct: 121 DSSKLKRHYLIHTGERNYICTYEGCGKAFSLDFNLRSHMKTHSQENYHICPYSGCVKRYA 180
Query: 461 DTFDLKRHTRTH 472
+ LK H +
Sbjct: 181 HEYKLKNHVAAY 192
>At1g72050.2 68414.m08328 zinc finger (C2H2 type) family protein
contains multiple zinc finger domains: PF00096: Zinc
finger, C2H2 type
Length = 412
Score = 46.8 bits (106), Expect = 4e-05
Identities = 28/102 (27%), Positives = 46/102 (45%), Gaps = 6/102 (5%)
Query: 405 EEEKNKQVL-VSEDDPTKFVCRVCSKNFSLQRLLNRHMKCHSDVKRYLCTF--CGKGFND 461
EEE++ + V E+ + C+ C F L +HM+ HS + + C C +
Sbjct: 48 EEERDDEACEVDEESSSNHTCQECGAEFKKPAHLKQHMQSHSLERSFTCYVDDCAASYRR 107
Query: 462 TFDLKRHTRTHTGVRPYKC--NLCEKSFTQRCSLESHCLKVH 501
L RH TH G + +KC C+ F+ + ++ H K H
Sbjct: 108 KDHLNRHLLTHKG-KLFKCPKENCKSEFSVQGNVGRHVKKYH 148
Score = 41.5 bits (93), Expect = 0.001
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
Query: 416 EDDPTKFVCRV--CSKNFSLQRLLNRHMKC-HSDVKRYLCTFCGKGFNDTFDLKRHTRTH 472
+ P + C V CS FS L +HMK H D++ ++C F G G + R+ +
Sbjct: 299 DSSPGEIKCEVEGCSSTFSKASNLQKHMKAVHDDIRPFVCGFPGCGMRFAYKHVRNKHEN 358
Query: 473 TGVRPYKC 480
+G Y C
Sbjct: 359 SGYHVYTC 366
Score = 29.1 bits (62), Expect = 8.4
Identities = 13/59 (22%), Positives = 28/59 (47%), Gaps = 5/59 (8%)
Query: 446 DVKRYLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCNLCEKSFTQRCSLESHCLKVHGVQ 504
D++ YLC +CG + + + +H ++H ++ L E+ + C ++ H Q
Sbjct: 16 DIRNYLCQYCGISRSKNYLITKHIQSH-----HQMELEEERDDEACEVDEESSSNHTCQ 69
>At3g48430.1 68416.m05287 zinc finger (C2H2 type) family protein /
transcription factor jumonji (jmj) family protein
contains Pfam domains PF02375: jmjN domain, PF02373: jmjC
domain and PF00096: Zinc finger, C2H2 type
Length = 1354
Score = 46.4 bits (105), Expect = 5e-05
Identities = 28/85 (32%), Positives = 37/85 (43%), Gaps = 5/85 (5%)
Query: 427 CSKNFSLQRLLNRHMKCHSDVKRYLCTF--CGKGFNDTFDLKRHTRTHTGVRPYKCNL-- 482
C KNF + L +H + HSD + C + C F + H R HTG RPY C
Sbjct: 1267 CGKNFFSHKYLVQHQRVHSDDRPLKCPWKGCKMTFKWAWSRTEHIRVHTGARPYVCAEPD 1326
Query: 483 CEKSFTQRCSLESHCLKV-HGVQHT 506
C ++F H K H V+ T
Sbjct: 1327 CGQTFRFVSDFSRHKRKTGHSVKKT 1351
Score = 34.7 bits (76), Expect = 0.17
Identities = 21/69 (30%), Positives = 29/69 (42%), Gaps = 3/69 (4%)
Query: 415 SEDDPTKFVCRVCSKNFSLQRLLNRHMKCHSDVKRYLCT--FCGKGFNDTFDLKRHTRTH 472
S+D P K + C F H++ H+ + Y+C CG+ F D RH R
Sbjct: 1285 SDDRPLKCPWKGCKMTFKWAWSRTEHIRVHTGARPYVCAEPDCGQTFRFVSDFSRHKR-K 1343
Query: 473 TGVRPYKCN 481
TG K N
Sbjct: 1344 TGHSVKKTN 1352
>At5g04240.1 68418.m00414 zinc finger (C2H2 type) family protein /
transcription factor jumonji (jmj) family protein
contains Pfam domians PF02375: jmjN domain, PF02373: jmjC
domain and PF00096: Zinc finger, C2H2 type
Length = 1327
Score = 42.7 bits (96), Expect = 6e-04
Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 4/65 (6%)
Query: 427 CSKNFSLQRLLNRHMKCHSDVKRYLCTF--CGKGFNDTFDLKRHTRTHTGVRPYKCNL-- 482
C K F + L H + H D + + C++ C F + H R HTG RPY C +
Sbjct: 1245 CGKKFRAHKYLVLHQRVHKDERPFECSWKGCSMTFKWQWARTEHLRLHTGERPYICKVDG 1304
Query: 483 CEKSF 487
C SF
Sbjct: 1305 CGLSF 1309
Score = 33.5 bits (73), Expect = 0.39
Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 4/57 (7%)
Query: 418 DPTKFVC--RVCSKNFSLQRLLNRHMKCHSDVKRYLCTF--CGKGFNDTFDLKRHTR 470
D F C + CS F Q H++ H+ + Y+C CG F D RH R
Sbjct: 1264 DERPFECSWKGCSMTFKWQWARTEHLRLHTGERPYICKVDGCGLSFRFVSDYSRHRR 1320
>At1g72050.1 68414.m08329 zinc finger (C2H2 type) family protein
contains multiple zinc finger domains: PF00096: Zinc
finger, C2H2 type
Length = 324
Score = 41.5 bits (93), Expect = 0.001
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
Query: 416 EDDPTKFVCRV--CSKNFSLQRLLNRHMKC-HSDVKRYLCTFCGKGFNDTFDLKRHTRTH 472
+ P + C V CS FS L +HMK H D++ ++C F G G + R+ +
Sbjct: 211 DSSPGEIKCEVEGCSSTFSKASNLQKHMKAVHDDIRPFVCGFPGCGMRFAYKHVRNKHEN 270
Query: 473 TGVRPYKC 480
+G Y C
Sbjct: 271 SGYHVYTC 278
>At1g68130.1 68414.m07782 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 419
Score = 41.5 bits (93), Expect = 0.001
Identities = 28/95 (29%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Query: 402 RQREEEKNKQVLVSEDDPTKFVCRVCSKNFSLQRLLNRHMKCHSDVKRYLCTFCGKGFND 461
R+ EE K+V V + PT C L + + HS+ K+++C C KG+
Sbjct: 101 RETNEEVRKRVYVCPE-PTCLHHNPCHALGDLVGIKKHFRRKHSNHKQWICERCSKGYAV 159
Query: 462 TFDLKRHTRTHTGVRPYKCNLCEKSFTQRCSLESH 496
D K H +T G R + C+ C + F++ S H
Sbjct: 160 QSDYKAHLKT-CGTRGHSCD-CGRVFSRVESFIEH 192
>At1g26590.1 68414.m03239 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 361
Score = 37.9 bits (84), Expect = 0.018
Identities = 17/63 (26%), Positives = 29/63 (46%)
Query: 389 HGVKNPLATEANARQREEEKNKQVLVSEDDPTKFVCRVCSKNFSLQRLLNRHMKCHSDVK 448
H +N + N ++R ++ K + + CR C + F + L HM CH +VK
Sbjct: 31 HTNENSVGYNGNKKKRLVDQRKMMAQKHKQQQQVGCRECGRVFVSLKALRGHMACHGEVK 90
Query: 449 RYL 451
+ L
Sbjct: 91 KML 93
>At2g01940.1 68415.m00129 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 439
Score = 37.5 bits (83), Expect = 0.024
Identities = 27/95 (28%), Positives = 42/95 (44%), Gaps = 3/95 (3%)
Query: 402 RQREEEKNKQVLVSEDDPTKFVCRVCSKNFSLQRLLNRHMKCHSDVKRYLCTFCGKGFND 461
R E K+V V + PT C L + + HS+ K+++C C KG+
Sbjct: 98 RDNNIEVKKRVYVCPE-PTCLHHNPCHALGDLVGIKKHFRRKHSNHKQWVCERCSKGYAV 156
Query: 462 TFDLKRHTRTHTGVRPYKCNLCEKSFTQRCSLESH 496
D K H +T G R + C+ C + F++ S H
Sbjct: 157 QSDYKAHLKT-CGTRGHSCD-CGRVFSRVESFIEH 189
Score = 34.3 bits (75), Expect = 0.22
Identities = 28/103 (27%), Positives = 42/103 (40%), Gaps = 17/103 (16%)
Query: 449 RYLCTFCGKGFNDTFDLKRHTRTHTGVRPYKC-----NLCEKSFTQRCSLESHCL----- 498
RY+C C +GF +L+ H R H P+K N+ K C E CL
Sbjct: 66 RYICEICNQGFQRDQNLQMHRRRHK--VPWKLLKRDNNIEVKKRVYVCP-EPTCLHHNPC 122
Query: 499 ----KVHGVQHTYAYKERRTKMYVCEECGHTTSEPEEHYMHLK 537
+ G++ + K K +VCE C + ++ HLK
Sbjct: 123 HALGDLVGIKKHFRRKHSNHKQWVCERCSKGYAVQSDYKAHLK 165
>At1g25250.1 68414.m03133 zinc finger (C2H2 type) family protein
contains zinc finger, C2H2 type, domain, PROSITE:PS00028
Length = 362
Score = 37.5 bits (83), Expect = 0.024
Identities = 27/94 (28%), Positives = 44/94 (46%), Gaps = 3/94 (3%)
Query: 403 QREEEKNKQVLVSEDDPTKFVCRVCSKNFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDT 462
+++EE K+V V + PT C L + + HS K+++C C KG+
Sbjct: 72 KKDEEVRKRVYVCPE-PTCLHHDPCHALGDLVGIKKHFRRKHSVHKQWVCERCSKGYAVQ 130
Query: 463 FDLKRHTRTHTGVRPYKCNLCEKSFTQRCSLESH 496
D K H +T G R + C+ C + F++ S H
Sbjct: 131 SDYKAHLKT-CGSRGHSCD-CGRVFSRVESFIEH 162
>At3g45260.1 68416.m04887 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 446
Score = 37.1 bits (82), Expect = 0.032
Identities = 39/170 (22%), Positives = 69/170 (40%), Gaps = 13/170 (7%)
Query: 330 PSPGGNNSLDGNSHMENTPISPAAAVSLKKGSVTDTKIQILQQ-RLGLPAELPLEFINGG 388
P+P +NS ++ P A ++L S+ T I + G + L+ G
Sbjct: 30 PNPTSSNSAKRKRNLPGNPDPDAEVIALSPNSLMTTNRFICEVCNKGFKRDQNLQLHRRG 89
Query: 389 HGVKNPLATEANARQREEEKNKQVLVSEDDPTKFVCRVCSKNFSLQRL--LNRHMKCHSD 446
H L + R +E+ K+V + P K C +L L + +H
Sbjct: 90 HN----LPWKLKQRTNKEQVKKKVYIC---PEK-TCVHHDPARALGDLTGIKKHFSRKHG 141
Query: 447 VKRYLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCNLCEKSFTQRCSLESH 496
K++ C C K + D K H++ G + Y+C+ C F+++ S +H
Sbjct: 142 EKKWKCDKCSKKYAVMSDWKAHSKI-CGTKEYRCD-CGTLFSRKDSFITH 189
>At5g22920.1 68418.m02680 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profiles:PF05495 CHY zinc
finger, PF00097 zinc finger, C3HC4 type (RING finger)
Length = 291
Score = 36.7 bits (81), Expect = 0.042
Identities = 25/93 (26%), Positives = 40/93 (43%), Gaps = 6/93 (6%)
Query: 452 CTFCGKGFNDTFDLKRHTRTHTG---VRPYKCNLCE--KSFTQRCSLESHCL-KVHGVQH 505
C C D+ +++H R V C+LCE + Q CS C+ K +
Sbjct: 47 CRHCHNEAKDSLHIEQHHRHELPRHEVSKVICSLCETEQDVQQNCSNCGVCMGKYFCSKC 106
Query: 506 TYAYKERRTKMYVCEECGHTTSEPEEHYMHLKK 538
+ + K Y C+ECG + EE++ H K+
Sbjct: 107 KFFDDDLSKKQYHCDECGICRTGGEENFFHCKR 139
>At2g02070.1 68415.m00143 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 602
Score = 36.7 bits (81), Expect = 0.042
Identities = 25/96 (26%), Positives = 43/96 (44%), Gaps = 20/96 (20%)
Query: 421 KFVCRVCSKNFSLQRLLNRHMKCHS-----------DVKR--YLC--TFC-----GKGFN 460
+F+C VC+K F ++ L H + H+ +VKR YLC C +
Sbjct: 80 RFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKSTKEVKRKVYLCPEPSCVHHDPSRALG 139
Query: 461 DTFDLKRHTRTHTGVRPYKCNLCEKSFTQRCSLESH 496
D +K+H G + +KC+ C K + + ++H
Sbjct: 140 DLTGIKKHYYRKHGEKKWKCDKCSKRYAVQSDWKAH 175
Score = 33.1 bits (72), Expect = 0.52
Identities = 37/151 (24%), Positives = 62/151 (41%), Gaps = 10/151 (6%)
Query: 347 TPISPAAAVSLKKGSVTDTKIQILQQ-RLGLPAELPLEFINGGHGVKNPLATEANARQRE 405
TP S A ++L ++ T I + G E L+ GH L + + +
Sbjct: 60 TPNSDAEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHN----LPWKLKQKSTK 115
Query: 406 EEKNKQVLVSEDDPTKFVCRVCSKNFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDL 465
E K K L E P+ L + + + H + K++ C C K + D
Sbjct: 116 EVKRKVYLCPE--PSCVHHDPSRALGDLTGIKKHYYRKHGE-KKWKCDKCSKRYAVQSDW 172
Query: 466 KRHTRTHTGVRPYKCNLCEKSFTQRCSLESH 496
K H++T G + Y+C+ C F++R S +H
Sbjct: 173 KAHSKT-CGTKEYRCD-CGTLFSRRDSFITH 201
>At2g47090.1 68415.m05882 zinc finger (C2H2 type) family protein
contains Prosite PS00028: Zinc finger, C2H2 type, domain
Length = 745
Score = 35.5 bits (78), Expect = 0.097
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Query: 464 DLKRHTRTHTGVRPYKCNLCEKSFTQRCSLE-SHCLKVHGVQHTYAYKERRTKMYVCEEC 522
DL +TR R CNLC + R E +HC++ V+H + + K+++C C
Sbjct: 96 DLNHYTRIKAMCR-LSCNLCNDTNKTRPKKEPNHCVRFKSVEHLKDHLNHQHKLHMCSLC 154
>At2g02080.1 68415.m00144 zinc finger (C2H2 type) family protein
contains Pfam domain PF00096: Zinc finger, C2H2 type
Length = 516
Score = 35.5 bits (78), Expect = 0.097
Identities = 25/96 (26%), Positives = 42/96 (43%), Gaps = 20/96 (20%)
Query: 421 KFVCRVCSKNFSLQRLLNRHMKCHS-----------DVKR--YLC--TFC-----GKGFN 460
+F+C VC+K F ++ L H + H+ +VKR YLC C +
Sbjct: 82 RFICDVCNKGFQREQNLQLHRRGHNLPWKLKQKSTKEVKRKVYLCPEPTCVHHDPSRALG 141
Query: 461 DTFDLKRHTRTHTGVRPYKCNLCEKSFTQRCSLESH 496
D +K+H G + +KC C K + + ++H
Sbjct: 142 DLTGIKKHYYRKHGEKKWKCEKCSKRYAVQSDWKAH 177
Score = 32.3 bits (70), Expect = 0.90
Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Query: 437 LNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCNLCEKSFTQRCSLESH 496
+ +H K++ C C K + D K H++T G + Y+C+ C F++R S +H
Sbjct: 146 IKKHYYRKHGEKKWKCEKCSKRYAVQSDWKAHSKT-CGTKEYRCD-CGTIFSRRDSYITH 203
>At3g29340.1 68416.m03684 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 650
Score = 35.1 bits (77), Expect = 0.13
Identities = 23/108 (21%), Positives = 40/108 (37%), Gaps = 5/108 (4%)
Query: 424 CRVCSKNFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKR--HTRTHTGVRPYKCN 481
C++C K+F + L H + H +K L + F++ + K R + Y+C
Sbjct: 45 CKICGKSFECYQALGGHQRIHRPIKEKLSK---QEFSEVYPRKSKLQKRPESSSSCYECK 101
Query: 482 LCEKSFTQRCSLESHCLKVHGVQHTYAYKERRTKMYVCEECGHTTSEP 529
+C K F L H + A + + E S+P
Sbjct: 102 VCGKIFGCYRGLGGHTKLHRSTKRELASTQDENSLLDSSEAKKIVSQP 149
Score = 33.9 bits (74), Expect = 0.30
Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 4/71 (5%)
Query: 387 GGHG-VKNPLATEANARQREE---EKNKQVLVSEDDPTKFVCRVCSKNFSLQRLLNRHMK 442
GGH + P+ + + ++ E K+K E + + C+VC K F R L H K
Sbjct: 59 GGHQRIHRPIKEKLSKQEFSEVYPRKSKLQKRPESSSSCYECKVCGKIFGCYRGLGGHTK 118
Query: 443 CHSDVKRYLCT 453
H KR L +
Sbjct: 119 LHRSTKRELAS 129
>At1g14580.1 68414.m01734 zinc finger (C2H2 type) family protein
similar to zinc finger protein ID1 GB:AAC18941
GI:3170601 from [Zea mays] contains Pfam domain,
PF00096: Zinc finger, C2H2 type
Length = 467
Score = 34.7 bits (76), Expect = 0.17
Identities = 24/96 (25%), Positives = 43/96 (44%), Gaps = 20/96 (20%)
Query: 421 KFVCRVCSKNFSLQRLLNRHMKCHS-----------DVKR--YLC--TFC-----GKGFN 460
+F+C VC+K F ++ L H + H+ +V+R YLC C +
Sbjct: 81 RFLCEVCNKGFQREQNLQLHRRGHNLPWKLKQKSNKEVRRKVYLCPEPSCVHHDPARALG 140
Query: 461 DTFDLKRHTRTHTGVRPYKCNLCEKSFTQRCSLESH 496
D +K+H G + +KC+ C K + + ++H
Sbjct: 141 DLTGIKKHYYRKHGEKKWKCDKCSKRYAVQSDWKAH 176
Score = 32.3 bits (70), Expect = 0.90
Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Query: 437 LNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCNLCEKSFTQRCSLESH 496
+ +H K++ C C K + D K H++T G + Y+C+ C F++R S +H
Sbjct: 145 IKKHYYRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTKEYRCD-CGTIFSRRDSYITH 202
>At5g66730.1 68418.m08412 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 500
Score = 34.3 bits (75), Expect = 0.22
Identities = 22/96 (22%), Positives = 41/96 (42%), Gaps = 20/96 (20%)
Query: 421 KFVCRVCSKNFSLQRLLNRHMKCHS-----------DVKR--YLCTFCG-------KGFN 460
+FVC +C+K F + L H + H+ +V++ Y+C G +
Sbjct: 60 RFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSTKEVRKKVYVCPVSGCVHHDPSRALG 119
Query: 461 DTFDLKRHTRTHTGVRPYKCNLCEKSFTQRCSLESH 496
D +K+H G + +KC C K + + ++H
Sbjct: 120 DLTGIKKHFCRKHGEKKWKCEKCSKKYAVQSDWKAH 155
>At5g44160.1 68418.m05404 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 466
Score = 34.3 bits (75), Expect = 0.22
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Query: 437 LNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCNLCEKSFTQRCSLESH 496
+ +H K++ C C K + D K H++T G R Y+C+ C F++R S +H
Sbjct: 129 IKKHFCRKHGEKKWTCEKCAKRYAVQSDWKAHSKT-CGTREYRCD-CGTIFSRRDSFITH 186
Score = 31.9 bits (69), Expect = 1.2
Identities = 33/132 (25%), Positives = 51/132 (38%), Gaps = 17/132 (12%)
Query: 449 RYLCTFCGKGFNDTFDLKRHTRTHTGVRPYKC-NLCEKSFTQRCSL--ESHCLKVH---- 501
R+LC CGKGF +L+ H R H P+K K +R + E C+ H
Sbjct: 65 RFLCEVCGKGFQRDQNLQLHRRGHN--LPWKLKQRTSKEVRKRVYVCPEKTCVHHHSSRA 122
Query: 502 -----GVQHTYAYKERRTKMYVCEECGHTTSEPEEHYMHLKK--QHPYSPALLKFYDKRH 554
G++ + K K + CE+C + + H K Y + +R
Sbjct: 123 LGDLTGIKKHFCRKHGE-KKWTCEKCAKRYAVQSDWKAHSKTCGTREYRCDCGTIFSRRD 181
Query: 555 FKFTNAAFANQL 566
T+ AF + L
Sbjct: 182 SFITHRAFCDAL 193
>At5g03150.1 68418.m00263 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 503
Score = 34.3 bits (75), Expect = 0.22
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Query: 437 LNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCNLCEKSFTQRCSLESH 496
+ +H K++ C C K + D K H +T G R YKC+ C F+++ S +H
Sbjct: 146 IKKHYSRKHGEKKWKCEKCSKKYAVQSDWKAHAKT-CGTREYKCD-CGTLFSRKDSFITH 203
>At3g57670.1 68416.m06425 zinc finger (C2H2 type) protein (WIP2)
identical to WIP2 protein [Arabidopsis thaliana]
gi|18027012|gb|AAL55722; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 383
Score = 34.3 bits (75), Expect = 0.22
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
Query: 435 RLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCNLCEKSFTQRCSLE 494
R L H K +K ++C CGK F D + H + + G + + C +C F + SL+
Sbjct: 286 RTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEK-NCG-KLWYC-ICGSDFKHKRSLK 342
Query: 495 SHCLKVHGVQH 505
H +K G H
Sbjct: 343 DH-IKAFGNGH 352
Score = 31.5 bits (68), Expect = 1.6
Identities = 26/106 (24%), Positives = 38/106 (35%), Gaps = 28/106 (26%)
Query: 419 PTKFVCRVCSKNFSLQRLLNRHMKCHSD----------------VKRYLCTFCGKGFNDT 462
PT+F C VC K F+ + HM H + R C C G +
Sbjct: 214 PTQFSCPVCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTGMLRLPCYCCAPGCRNN 273
Query: 463 FD------------LKRHTRTHTGVRPYKCNLCEKSFTQRCSLESH 496
D L+ H + G++P+ C C K+F R +H
Sbjct: 274 IDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTH 319
>At3g50700.1 68416.m05547 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 452
Score = 33.9 bits (74), Expect = 0.30
Identities = 23/96 (23%), Positives = 42/96 (43%), Gaps = 20/96 (20%)
Query: 421 KFVCRVCSKNFSLQRLLNRHMKCHS-----------DVKR--YLC--TFC-----GKGFN 460
+FVC +C+K F + L H + H+ +VK+ Y+C C +
Sbjct: 62 RFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQKSNKEVKKKVYVCPEVSCVHHDPSRALG 121
Query: 461 DTFDLKRHTRTHTGVRPYKCNLCEKSFTQRCSLESH 496
D +K+H G + +KC+ C K + + ++H
Sbjct: 122 DLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAH 157
>At2g41940.1 68415.m05188 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 257
Score = 33.9 bits (74), Expect = 0.30
Identities = 15/59 (25%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 392 KNPLATEANARQREEEKNKQVLVSEDDPTKFVCRVCSKNFSLQRLLNRHMKCHSDVKRY 450
KN ++E N + +++EK+K ++ +F C C +NF + L H H +++
Sbjct: 66 KNDESSE-NIKDKDKEKDKDKDKDNNNNRRFECHYCFRNFPTSQALGGHQNAHKRERQH 123
>At1g03840.1 68414.m00365 zinc finger (C2H2 type) family protein
contains Zinc finger,C2H2 type,domain contains Pfam
domain, PF00096: Zinc finger, C2H2 type
Length = 506
Score = 33.9 bits (74), Expect = 0.30
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Query: 437 LNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCNLCEKSFTQRCSLESH 496
+ +H K++ C C K + D K H++T G R Y+C+ C F++R S +H
Sbjct: 133 IKKHFCRKHGEKKWKCEKCAKRYAVQSDWKAHSKT-CGTREYRCD-CGTIFSRRDSFITH 190
Score = 31.9 bits (69), Expect = 1.2
Identities = 33/132 (25%), Positives = 51/132 (38%), Gaps = 17/132 (12%)
Query: 449 RYLCTFCGKGFNDTFDLKRHTRTHTGVRPYKC-NLCEKSFTQRCSL--ESHCLKVH---- 501
R+LC CGKGF +L+ H R H P+K K +R + E C+ H
Sbjct: 69 RFLCEICGKGFQRDQNLQLHRRGHN--LPWKLKQRTSKEVRKRVYVCPEKSCVHHHPTRA 126
Query: 502 -----GVQHTYAYKERRTKMYVCEECGHTTSEPEEHYMHLKK--QHPYSPALLKFYDKRH 554
G++ + K K + CE+C + + H K Y + +R
Sbjct: 127 LGDLTGIKKHFCRKHGE-KKWKCEKCAKRYAVQSDWKAHSKTCGTREYRCDCGTIFSRRD 185
Query: 555 FKFTNAAFANQL 566
T+ AF + L
Sbjct: 186 SFITHRAFCDAL 197
>At5g63280.1 68418.m07942 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 271
Score = 33.5 bits (73), Expect = 0.39
Identities = 13/37 (35%), Positives = 19/37 (51%)
Query: 460 NDTFDLKRHTRTHTGVRPYKCNLCEKSFTQRCSLESH 496
ND + + H + H V +KC C+KSF L+ H
Sbjct: 87 NDLYRDQEHHKVHVDVFEWKCGYCKKSFNDEKFLDKH 123
Score = 32.7 bits (71), Expect = 0.68
Identities = 14/32 (43%), Positives = 17/32 (53%)
Query: 440 HMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRT 471
H K H DV + C +C K FND L +H T
Sbjct: 95 HHKVHVDVFEWKCGYCKKSFNDEKFLDKHFST 126
>At1g55110.1 68414.m06294 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 455
Score = 33.5 bits (73), Expect = 0.39
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Query: 437 LNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCNLCEKSFTQRCSLESH 496
+ +H K++ C C K + D K H +T G + YKC+ C F++R S +H
Sbjct: 156 IKKHFFRKHGEKKWKCEKCSKKYAVQSDWKAHAKT-CGTKEYKCD-CGTLFSRRDSFITH 213
>At1g46408.1 68414.m05212 MADS-box family protein contains
similarity to MADS-box protein GI:2505875 from
[Arabidopsis thaliana]
Length = 266
Score = 33.5 bits (73), Expect = 0.39
Identities = 19/43 (44%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
Query: 188 SNEGILGNLSDSTEDFADLLNNPVESLTDSEVRESSSISPDSV 230
+N G+LGNL + EDF D L+ +E LT SE S ++ D V
Sbjct: 226 NNNGLLGNLDECNEDFDD-LDQIIEYLTSSEAL-SMNLKMDDV 266
Score = 30.7 bits (66), Expect = 2.8
Identities = 14/31 (45%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Query: 188 SNEGILGNLSDSTEDFADLLNNPVESLTDSE 218
+N G+LGNL + EDF D L+ +++T+SE
Sbjct: 166 NNNGLLGNLDECNEDFDD-LDQIFDTVTNSE 195
>At3g13810.1 68416.m01744 zinc finger (C2H2 type) family protein
similar to finger protein pcp1 GB:S48856 from [Solanum
tuberosum] contains Pfam domain, PF00096: Zinc finger,
C2H2 type
Length = 513
Score = 33.1 bits (72), Expect = 0.52
Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Query: 437 LNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCNLCEKSFTQRCSLESH 496
+ +H K++ C C K + D K H++T G + Y+C+ C F++R S +H
Sbjct: 163 IKKHFCRKHGEKKWKCDKCSKKYAVQSDCKAHSKT-CGTKEYRCD-CGTLFSRRDSFITH 220
Score = 31.1 bits (67), Expect = 2.1
Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Query: 403 QREEEKNKQVLVSEDDPTKFVCRVCSKNFSLQ-RLLNRHMKCHSDVKRYLCTFCGKGFND 461
Q+++E+ +Q LV D T+ R N + ++ K R++C C KGF
Sbjct: 51 QQQQEQQQQQLVVPDSQTQKKRRNQPGNPDPESEVIALSPKTLMATNRFVCEICNKGFQR 110
Query: 462 TFDLKRHTRTH 472
+L+ H R H
Sbjct: 111 DQNLQLHRRGH 121
>At2g37430.1 68415.m04590 zinc finger (C2H2 type) family protein
(ZAT11) contains Pfam domain, PF00096: Zinc finger, C2H2
type
Length = 178
Score = 33.1 bits (72), Expect = 0.52
Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 9/76 (11%)
Query: 421 KFVCRVCSKNFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGVRPYKC 480
+F C+ C+K FS + L H H K + + D+K + + G +KC
Sbjct: 46 QFECKTCNKRFSSFQALGGHRASHKKPKLTV---------EQKDVKHLSNDYKGNHFHKC 96
Query: 481 NLCEKSFTQRCSLESH 496
++C +SF +L H
Sbjct: 97 SICSQSFGTGQALGGH 112
>At2g23740.1 68415.m02834 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 907
Score = 33.1 bits (72), Expect = 0.52
Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 5/64 (7%)
Query: 478 YKCNLCEKSFTQRCSLESHCLKVHGVQHTYAYKERRTKMYVCEECGHTTSEPEEHYMHLK 537
+ C +C SF +R LE H + H VQ + + C CG + E+ +H++
Sbjct: 496 FACAICLDSFVRRKLLEIHVEERHHVQFA-----EKCMLLQCIPCGSHFGDKEQLLVHVQ 550
Query: 538 KQHP 541
HP
Sbjct: 551 AVHP 554
Score = 30.3 bits (65), Expect = 3.6
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 432 SLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRT-HTG 474
S Q +++++ + S V +++C FCG FN DL RH + H G
Sbjct: 581 SSQIVVSQNNENTSGVHKFVCKFCGLKFNLLPDLGRHHQAEHMG 624
Score = 29.9 bits (64), Expect = 4.8
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 5/49 (10%)
Query: 397 TEANARQREEEKNKQVLVSEDDPT-----KFVCRVCSKNFSLQRLLNRH 440
T Q+ E + Q++VS+++ KFVC+ C F+L L RH
Sbjct: 569 TNGEFSQKPEAGSSQIVVSQNNENTSGVHKFVCKFCGLKFNLLPDLGRH 617
>At1g30970.1 68414.m03792 zinc finger (C2H2 type) family protein
contains Pfam domain PF00096: Zinc finger, C2H2 type
Length = 367
Score = 33.1 bits (72), Expect = 0.52
Identities = 14/50 (28%), Positives = 26/50 (52%), Gaps = 4/50 (8%)
Query: 452 CTFCGKGFNDTFDLKRHTRTHTGVRPYKCNLCEKSFTQRCSLESHCLKVH 501
C +C + F+D L +H + + +KC++C K + + H L+VH
Sbjct: 14 CYYCDREFDDEKILVQHQKA----KHFKCHVCHKKLSTASGMVIHVLQVH 59
>At5g56200.1 68418.m07012 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 493
Score = 32.3 bits (70), Expect = 0.90
Identities = 19/60 (31%), Positives = 27/60 (45%)
Query: 387 GGHGVKNPLATEANARQREEEKNKQVLVSEDDPTKFVCRVCSKNFSLQRLLNRHMKCHSD 446
GGH + L T + R + + V SE + C VC K F+ + L HM+ H D
Sbjct: 95 GGHKRIHVLETRKFSMMRPKMVSGMVGRSERGDLEVACCVCYKKFTSMKALYGHMRFHPD 154
Score = 31.5 bits (68), Expect = 1.6
Identities = 15/50 (30%), Positives = 21/50 (42%)
Query: 395 LATEANARQREEEKNKQVLVSEDDPTKFVCRVCSKNFSLQRLLNRHMKCH 444
L TEA + +S VC +C K+FS + L H +CH
Sbjct: 384 LGTEAIITGLASAQGTNTSLSSSHNGDHVCNICHKSFSTGQALGGHKRCH 433
>At5g54360.1 68418.m06769 zinc finger (C2H2 type) family
protein-related contains Prosite:PS00028: Zinc finger,
C2H2 type, domain.
Length = 270
Score = 32.3 bits (70), Expect = 0.90
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Query: 407 EKNKQVLVS--EDDPTKFVCRVCSKNFSLQRLLNRHMKCH 444
+K VL+ +D+ CR C +NF L HMKCH
Sbjct: 64 KKRDTVLIHPPKDNKISHTCRFCKRNFKSCFALGGHMKCH 103
>At3g60380.1 68416.m06753 expressed protein
Length = 743
Score = 32.3 bits (70), Expect = 0.90
Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 4/92 (4%)
Query: 138 LALKDEEVDYENKLENLGAIGNYSSNFDDPMVVEDVIDNYQFNATLTFPGSNEGILGN-- 195
LA V ++ + E +G NY SNF P+ V++ + + +T + N
Sbjct: 248 LAAPASPVPWQARPEMMGIGDNYPSNFQ-PISVDETLKSISSRSTGSSSSQTSYASQNQN 306
Query: 196 -LSDSTEDFADLLNNPVESLTDSEVRESSSIS 226
S S A+ LN+ VE L + R+SSS S
Sbjct: 307 RFSPSRSVSAESLNSNVEELVKEKSRQSSSRS 338
>At1g27730.1 68414.m03389 zinc finger (C2H2 type) family protein
(ZAT10) / salt-tolerance zinc finger protein (STZ)
identical to salt-tolerance zinc finger protein
GB:CAA64820 GI:1565227 from [Arabidopsis thaliana];
contains Pfam domain, PF00096: Zinc finger, C2H2 type;
identical to cDNA zinc finger protein STZ/ZAT10
(STZ/ZAT10) GI:9965730
Length = 227
Score = 32.3 bits (70), Expect = 0.90
Identities = 23/77 (29%), Positives = 31/77 (40%), Gaps = 4/77 (5%)
Query: 422 FVCRVCSKNFSLQRLLNRHMKCHSDVKRYLCTFCGKG-FNDTFDLKRHTRTHTGV-RPYK 479
+ C VC K FS + L H H K T G G + T + TG + +
Sbjct: 80 YKCSVCDKTFSSYQALGGHKASHR--KNLSQTLSGGGDDHSTSSATTTSAVTTGSGKSHV 137
Query: 480 CNLCEKSFTQRCSLESH 496
C +C KSF +L H
Sbjct: 138 CTICNKSFPSGQALGGH 154
>At4g03270.1 68417.m00446 cyclin family protein similar to CycD3;2
[Lycopersicon esculentum] GI:6434199 ; contains Pfam
profiles PF00134: Cyclin, N-terminal domain, PF02984:
Cyclin, C-terminal domain
Length = 302
Score = 31.9 bits (69), Expect = 1.2
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Query: 127 QYSLMQNAPYGLALKDEEVDYENKLENLGAIGNYSSNFDDPMVVEDVIDNY--QFNATLT 184
++ M ++ Y +LK N+ + + +I YS FDDP + + NY +F ++
Sbjct: 35 EFQHMPSSHYFHSLKSSAFLLSNRNQAISSITQYSRKFDDPSLTYLAV-NYLDRFLSSED 93
Query: 185 FPGSNEGILGNLSDSTEDFADLLNNPVESLTDSEV 219
P S IL +S S + + P S++D V
Sbjct: 94 MPQSKPWILKLISLSCVSLSAKMRKPDMSVSDLPV 128
>At1g65130.1 68414.m07384 ubiquitin carboxyl-terminal
hydrolase-related contains Pfam profiles PF00443:
Ubiquitin carboxyl-terminal hydrolase, PF04780: Protein
of unknown function (DUF629), PF04781: Protein of
unknown function (DUF627)
Length = 1086
Score = 31.9 bits (69), Expect = 1.2
Identities = 12/35 (34%), Positives = 20/35 (57%)
Query: 506 TYAYKERRTKMYVCEECGHTTSEPEEHYMHLKKQH 540
T+A + R+ + ++C C S PEE HL ++H
Sbjct: 219 TFARENRKWRFWMCRTCSKKFSSPEECKNHLGQEH 253
>At1g31150.1 68414.m03811 expressed protein EST gb|Z33866 comes from
this gene
Length = 673
Score = 31.9 bits (69), Expect = 1.2
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Query: 198 DSTEDFADLLN-NPVESLTDSEVRESSSISPDSVHNAVDIEALAEQVHL 245
DS ED D+ P + LT S +E + P S+H E + +VH+
Sbjct: 364 DSLEDVTDVSQARPKKPLTRSSKKEKEVVKPPSIHKHTSQEKIKAKVHV 412
>At5g22890.1 68418.m02677 zinc finger (C2H2 type) family protein
contains Pfam domain PF00096: Zinc finger, C2H2 type
Length = 373
Score = 31.5 bits (68), Expect = 1.6
Identities = 23/92 (25%), Positives = 38/92 (41%), Gaps = 18/92 (19%)
Query: 424 CRVCSKNFSLQRLLNRHMKCHSD---VKRYLCTFCGKGFNDTFDLKRH-----------T 469
C++C K F L HM+ H D + L + + + LK+H
Sbjct: 219 CQICGKGFKRDANLRMHMRAHGDEYKTREALISPTSQDKKGGYSLKKHYYSCPQHGCRWN 278
Query: 470 RTHTGVRPYKCNLCEKSFTQRCSLESHCLKVH 501
+ H +P K +C K+ +R SHC K++
Sbjct: 279 QRHEKFQPLKSVICAKNHYKR----SHCPKMY 306
Score = 29.9 bits (64), Expect = 4.8
Identities = 21/69 (30%), Positives = 28/69 (40%), Gaps = 5/69 (7%)
Query: 450 YLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCNLCEKSFTQRCSLESHCLKVHGV---QHT 506
+ C CGKGF +L+ H R H YK S T + + LK H QH
Sbjct: 217 HYCQICGKGFKRDANLRMHMRAHGD--EYKTREALISPTSQDKKGGYSLKKHYYSCPQHG 274
Query: 507 YAYKERRTK 515
+ +R K
Sbjct: 275 CRWNQRHEK 283
>At4g02670.1 68417.m00362 zinc finger (C2H2 type) family protein
similar to potato PCP1 zinc finger protein, GenBank
accession number X82328 contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 402
Score = 31.5 bits (68), Expect = 1.6
Identities = 23/97 (23%), Positives = 39/97 (40%), Gaps = 21/97 (21%)
Query: 421 KFVCRVCSKNFSLQRLLNRHMKCHS--------------DVKRYLC--TFCG-----KGF 459
+FVC +C+K F + L H + H+ K Y+C T C +
Sbjct: 81 RFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQKNTKEQQKKKVYVCPETNCAHHHPSRAL 140
Query: 460 NDTFDLKRHTRTHTGVRPYKCNLCEKSFTQRCSLESH 496
D +K+H G + +KC C K + + ++H
Sbjct: 141 GDLTGIKKHFCRKHGEKKWKCEKCSKFYAVQSDWKAH 177
Score = 30.3 bits (65), Expect = 3.6
Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Query: 437 LNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCNLCEKSFTQRCSLESH 496
+ +H K++ C C K + D K HT+ G R Y+C+ C F+++ + +H
Sbjct: 146 IKKHFCRKHGEKKWKCEKCSKFYAVQSDWKAHTKI-CGTRDYRCD-CGTLFSRKDTFITH 203
>At3g20880.1 68416.m02640 zinc finger (C2H2 type) protein (WIP4)
identical to WIP4 protein [Arabidopsis thaliana]
gi|18376500|emb|CAC86168; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 412
Score = 31.5 bits (68), Expect = 1.6
Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 4/71 (5%)
Query: 435 RLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCNLCEKSFTQRCSLE 494
R L H K V+ + C CGK F D + H + + G + + C+ C F + SL+
Sbjct: 325 RTLQTHYKRKHGVRPFACRRCGKAFAVKGDWRTHEK-NCG-KLWYCS-CGSDFKHKRSLK 381
Query: 495 SHCLKVHGVQH 505
H +K G H
Sbjct: 382 DH-VKAFGNGH 391
>At2g31760.1 68415.m03878 zinc finger protein-related contains low
similarity to zinc finger proteins and Pfam PF01485: IBR
domain
Length = 514
Score = 31.5 bits (68), Expect = 1.6
Identities = 15/62 (24%), Positives = 27/62 (43%), Gaps = 5/62 (8%)
Query: 402 RQREEEKNKQVLVSEDDPTKFVCRVCSKNFSLQRLLNRHMKCHSDVKRYLCTFCGKGFND 461
+ ++E +NK +++ P C C + N HM C + C CGK ++D
Sbjct: 260 KNQDESENKNWILANSKP----CPKCKRPIEKSHGCN-HMTCSASCGHRFCWICGKSYSD 314
Query: 462 TF 463
+
Sbjct: 315 HY 316
>At1g51220.1 68414.m05761 zinc finger (C2H2 type) protein (WIP5)
identical to WIP5 protein [Arabidopsis thaliana]
gi|18376498|emb|CAC86167; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 337
Score = 31.5 bits (68), Expect = 1.6
Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 4/71 (5%)
Query: 435 RLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCNLCEKSFTQRCSLE 494
R L H K K + C CGK F D + H + + G + + C+ C F + SL+
Sbjct: 247 RTLQTHYKRKHGSKPFACRMCGKAFAVKGDWRTHEK-NCG-KLWYCS-CGSDFKHKRSLK 303
Query: 495 SHCLKVHGVQH 505
H +K G H
Sbjct: 304 DH-VKAFGNGH 313
>At5g43170.1 68418.m05269 zinc finger (C2H2 type) protein 3 (AZF3)
identical to Cys2/His2-type zinc finger protein 3
[Arabidopsis thaliana] gi|6009889|dbj|BAA85109
Length = 193
Score = 31.1 bits (67), Expect = 2.1
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 423 VCRVCSKNFSLQRLLNRHMKCHSD 446
VC VC K+F+ + L H +CH D
Sbjct: 119 VCSVCGKSFATGQALGGHKRCHYD 142
Score = 30.3 bits (65), Expect = 3.6
Identities = 23/83 (27%), Positives = 34/83 (40%), Gaps = 13/83 (15%)
Query: 414 VSEDDPTKFVCRVCSKNFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHT 473
V+ + + C VC K FS + L H H + G G ND + T
Sbjct: 67 VTVAEKPSYKCGVCYKTFSSYQALGGHKASHRSLY-------GGGENDK------STPST 113
Query: 474 GVRPYKCNLCEKSFTQRCSLESH 496
V+ + C++C KSF +L H
Sbjct: 114 AVKSHVCSVCGKSFATGQALGGH 136
>At4g14990.1 68417.m02303 expressed protein
Length = 787
Score = 31.1 bits (67), Expect = 2.1
Identities = 14/43 (32%), Positives = 20/43 (46%)
Query: 314 FSSHPLDLDSPTGVSLPSPGGNNSLDGNSHMENTPISPAAAVS 356
+SS P+ + T S PSPG + SH+ P P + S
Sbjct: 170 YSSEPIIVPESTFTSFPSPGKRSQQSSPSHIHRAPSLPGGSQS 212
>At3g27480.1 68416.m03436 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 604
Score = 31.1 bits (67), Expect = 2.1
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 9/58 (15%)
Query: 472 HTGVRPYKCNLCEKSFTQRCSLES------HCLKVHGVQHTYAYKERRTKMYVCEECG 523
+TG Y C++C+ + RC++E LKVH +HT R +VC+ CG
Sbjct: 204 NTGNLLYHCDICKFNLDMRCAIERPPPVALSNLKVH--EHTLTLMPRLIS-FVCDACG 258
>At1g34370.2 68414.m04268 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 499
Score = 31.1 bits (67), Expect = 2.1
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 450 YLCTFCGKGFNDTFDLKRHTRTH 472
+ CT CGKGF +L+ H R H
Sbjct: 244 HFCTICGKGFKRDANLRMHMRGH 266
>At1g34370.1 68414.m04267 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 499
Score = 31.1 bits (67), Expect = 2.1
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 450 YLCTFCGKGFNDTFDLKRHTRTH 472
+ CT CGKGF +L+ H R H
Sbjct: 244 HFCTICGKGFKRDANLRMHMRGH 266
>At1g17050.1 68414.m02073 geranyl diphosphate synthase, putative /
GPPS, putative / dimethylallyltransferase, putative /
prenyl transferase, putative similar to GI:11322965;
Except for first 55 amino acids, 52% identical to Prenyl
transferase (Cyanophora paradoxa) (gi 99282). Location
of est 120E9T7 (gb|T43950)
Length = 417
Score = 31.1 bits (67), Expect = 2.1
Identities = 29/110 (26%), Positives = 49/110 (44%), Gaps = 6/110 (5%)
Query: 169 VVEDVIDNYQFNATLTFPGSNEGILGNLSDSTEDFADLLNNPVESLTDSEVRESSSISPD 228
VV+D++D Q L P +N+ GN++ + FA L N P E+ ES P
Sbjct: 307 VVDDILDFTQSTEQLGKPAANDLAKGNIT-APVIFA-LENEP----RLREIIESEFCEPG 360
Query: 229 SVHNAVDIEALAEQVHLSRQYYEKANYLAFANQEQSPSYNFAKERPDLLM 278
S+ A++I + +++ ++ LA N P F D++M
Sbjct: 361 SLEEAIEIVRNRGGIKKAQELAKEKAELALKNLNCLPRSGFRSALEDMVM 410
>At1g06670.1 68414.m00707 DEIH-box RNA/DNA helicase identical to
DEIH-box RNA/DNA helicase GB:BAA84364 GI:5881579
[Arabidopsis thaliana]
Length = 1576
Score = 31.1 bits (67), Expect = 2.1
Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 7/92 (7%)
Query: 322 DSPTGVSLPSPGGNNSLDGNSHMENTPISPAAAVSLKKGSVTDTKIQILQQRLGLPAELP 381
D G P NS+D + ENTP S A + KK + +K+ + +++ +P+ L
Sbjct: 1271 DLANGNEKTEPNSANSMDLGNMEENTP-SDLANGNKKKEPKSVSKLDLGSEKVSIPSNL- 1328
Query: 382 LEFINGG--HGVKNPLATEANARQREEEKNKQ 411
+NG H + +A+A ++ E+K +
Sbjct: 1329 ---VNGNEQHDLNIAPGEDASAAKQPEKKRSR 1357
>At4g31420.2 68417.m04461 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 405
Score = 30.7 bits (66), Expect = 2.8
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 5/65 (7%)
Query: 385 INGGHGVKNPLATEANARQREEEKNKQVLVSEDDPTKFVCRVCSKNFSLQRLLNRHMKCH 444
+ G GV L EA +EKNK S + P + C +C+K + + +H++
Sbjct: 36 VAGVPGVTEALF-EARQSALAQEKNK----SNEAPMLYTCAICAKGYRSSKAHEQHLQSR 90
Query: 445 SDVKR 449
S V R
Sbjct: 91 SHVLR 95
>At4g31420.1 68417.m04460 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 404
Score = 30.7 bits (66), Expect = 2.8
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 5/65 (7%)
Query: 385 INGGHGVKNPLATEANARQREEEKNKQVLVSEDDPTKFVCRVCSKNFSLQRLLNRHMKCH 444
+ G GV L EA +EKNK S + P + C +C+K + + +H++
Sbjct: 36 VAGVPGVTEALF-EARQSALAQEKNK----SNEAPMLYTCAICAKGYRSSKAHEQHLQSR 90
Query: 445 SDVKR 449
S V R
Sbjct: 91 SHVLR 95
>At3g19580.1 68416.m02483 zinc finger (C2H2 type) protein 2 (AZF2)
identical to Cys2/His2-type zinc finger protein 2
[Arabidopsis thaliana] gi|6009885|dbj|BAA85107
Length = 273
Score = 30.7 bits (66), Expect = 2.8
Identities = 11/20 (55%), Positives = 14/20 (70%)
Query: 477 PYKCNLCEKSFTQRCSLESH 496
PYKCN+CEK+F +L H
Sbjct: 105 PYKCNVCEKAFPSYQALGGH 124
>At2g01980.1 68415.m00133 sodium proton exchanger, putative (NHX7)
(SOS1) identical to putative Na+/H+ antiporter SOS1
[Arabidopsis thaliana] gi|8515714|gb|AAF76139; Member of
The Monovalent Cation:Proton Antiporter (CPA1) Family,
PMID:11500563
Length = 1146
Score = 30.7 bits (66), Expect = 2.8
Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 9/92 (9%)
Query: 335 NNSLDGNSHMENTPISPAAA-VSLKKGSVTDTKIQILQQRLGLPAELPLEFINGGHGVKN 393
NN L N + P++PA VS K S TK Q+ ++ +LPL+ G +
Sbjct: 1060 NNKLQDNLLYKKLPLNPAQGLVSAKSESSIVTKKQLETRKHA--CQLPLK---GESSTRQ 1114
Query: 394 PLATEANARQREEEKNKQVLVSEDDPTKFVCR 425
E++ EE++++ ++V D P+K V R
Sbjct: 1115 NTMVESSD---EEDEDEGIVVRIDSPSKIVFR 1143
>At1g67560.1 68414.m07697 lipoxygenase family protein similar to
13-lipoxygenase GB:CAA65269 [Solanum tuberosum],
gi:1654140 [Lycopersicon esculentum]
Length = 917
Score = 30.7 bits (66), Expect = 2.8
Identities = 19/74 (25%), Positives = 32/74 (43%), Gaps = 6/74 (8%)
Query: 384 FINGGHGVKNPLATEANARQREEEKNKQVLVSEDDPTKF------VCRVCSKNFSLQRLL 437
F +G PLA E + E +NK V D T VCS + + +L+
Sbjct: 514 FFYSKNGALRPLAIELSLPPTAESENKFVYTHGHDATTHWIWKLAKAHVCSNDAGVHQLV 573
Query: 438 NRHMKCHSDVKRYL 451
N ++ H+ ++ Y+
Sbjct: 574 NHWLRTHASMEPYI 587
>At2g41835.1 68415.m05170 zinc finger (C2H2 type, AN1-like) family
protein contains Pfam domain, PF00096: Zinc finger, C2H2
type; contains Pfam domain, PF01428: AN1-like Zinc
finger
Length = 279
Score = 30.3 bits (65), Expect = 3.6
Identities = 22/70 (31%), Positives = 29/70 (41%), Gaps = 10/70 (14%)
Query: 415 SEDDPTKFVCRVCSKNFSLQRLLNRHMKC---------HSDVKRYLCTFCGKGFNDTFDL 465
S+D+ VC C FS L H++ H +V +C C +GF D DL
Sbjct: 206 SKDNGIVEVCPQCGAKFSSVTSLVEHVEKTHERNKKQNHGNVTVDVCPRCSRGFRDPVDL 265
Query: 466 KRH-TRTHTG 474
H R H G
Sbjct: 266 VNHIERDHRG 275
>At1g26610.1 68414.m03241 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 455
Score = 30.3 bits (65), Expect = 3.6
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 421 KFVCRVCSKNFSLQRLLNRHMKCH 444
KFVC+ CSK F + L H++ H
Sbjct: 8 KFVCKFCSKRFPCGKSLGGHIRTH 31
Score = 29.5 bits (63), Expect = 6.4
Identities = 11/23 (47%), Positives = 13/23 (56%)
Query: 424 CRVCSKNFSLQRLLNRHMKCHSD 446
CR C K F + L HM CHS+
Sbjct: 95 CRECGKGFVSSKALCGHMACHSE 117
>At5g61470.1 68418.m07713 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 304
Score = 29.9 bits (64), Expect = 4.8
Identities = 10/23 (43%), Positives = 16/23 (69%)
Query: 423 VCRVCSKNFSLQRLLNRHMKCHS 445
+C+VC K+FS + L HM+ H+
Sbjct: 10 ICQVCKKSFSNGKALGGHMRAHT 32
>At4g16610.1 68417.m02512 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 204
Score = 29.9 bits (64), Expect = 4.8
Identities = 12/24 (50%), Positives = 15/24 (62%)
Query: 421 KFVCRVCSKNFSLQRLLNRHMKCH 444
K C++CSK+F R L HMK H
Sbjct: 4 KHKCKLCSKSFCNGRALGGHMKSH 27
>At2g42400.1 68415.m05248 expressed protein
Length = 450
Score = 29.9 bits (64), Expect = 4.8
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Query: 178 QFNATLTFPGSNEGILGN-LSDSTEDFADLLNNPVESLTDSEVRESSSISPD 228
++ A LT P +LG +S E+FA LL E S ++E + PD
Sbjct: 53 EWQAELTAPSPESSLLGEGISQFLEEFAPLLKLDEEDDATSTLKEHAGAKPD 104
>At2g17180.1 68415.m01984 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 270
Score = 29.9 bits (64), Expect = 4.8
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 424 CRVCSKNFSLQRLLNRHMKCH 444
C +CS+ FS + L HM+CH
Sbjct: 213 CNICSRVFSSGQALGGHMRCH 233
>At1g02030.1 68414.m00123 zinc finger (C2H2 type) family protein
identical to C2H2 zinc finger protein ZAT1 [Arabidopsis
thaliana] gi|1418321|emb|CAA67227; contains Pfam domain,
PF00096: Zinc finger, C2H2 type
Length = 267
Score = 29.9 bits (64), Expect = 4.8
Identities = 23/94 (24%), Positives = 40/94 (42%), Gaps = 7/94 (7%)
Query: 403 QREEEKNKQVLVSEDDPTKFVCRVCSKNFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDT 462
++EEE++ + + F C C K F + L H H K+ + G +
Sbjct: 141 EKEEEESDEERWKKKRNKWFECETCEKVFKSYQALGGHRASH---KKKIAETDQLGSD-- 195
Query: 463 FDLKRHTRTHTGVRPYKCNLCEKSFTQRCSLESH 496
+LK+ + T ++C +C K FT +L H
Sbjct: 196 -ELKKKKKKSTSSH-HECPICAKVFTSGQALGGH 227
>At5g16680.1 68418.m01951 PHD finger family protein contains Pfam
domain, PF00628: PHD-finger
Length = 1290
Score = 29.5 bits (63), Expect = 6.4
Identities = 19/62 (30%), Positives = 26/62 (41%), Gaps = 4/62 (6%)
Query: 351 PAAAVSLKKGSVTDTKIQ-ILQQRLGLPAELPLEFINGG---HGVKNPLATEANARQREE 406
P G K+Q + +Q LG +LPL + G HG NPL + N+ Q
Sbjct: 1045 PPQVTGSNSGDSLVRKVQKVEEQELGGRKDLPLTVMGSGIQSHGQDNPLEKDLNSSQASH 1104
Query: 407 EK 408
K
Sbjct: 1105 RK 1106
>At5g06650.1 68418.m00751 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 191
Score = 29.5 bits (63), Expect = 6.4
Identities = 15/68 (22%), Positives = 27/68 (39%), Gaps = 4/68 (5%)
Query: 377 PAELPLEFINGGHGVKNPLATEANARQREEEKNKQVLVSEDDPTKFVCRVCSKNFSLQRL 436
P E P+ G + E+ ++ E N+ + ++ +F C C +NF +
Sbjct: 14 PKERPIRLFGFEFGASHE---ESESKDNYNENNESIK-DDNKEKRFKCHYCFRNFPTSQA 69
Query: 437 LNRHMKCH 444
L H H
Sbjct: 70 LGGHQNAH 77
>At5g04340.1 68418.m00426 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 238
Score = 29.5 bits (63), Expect = 6.4
Identities = 10/26 (38%), Positives = 16/26 (61%)
Query: 423 VCRVCSKNFSLQRLLNRHMKCHSDVK 448
VC +C K+F+ + L H +CH + K
Sbjct: 149 VCSICHKSFATGQALGGHKRCHYEGK 174
>At2g43220.1 68415.m05372 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 538
Score = 29.5 bits (63), Expect = 6.4
Identities = 29/107 (27%), Positives = 41/107 (38%), Gaps = 16/107 (14%)
Query: 424 CRVCSKNFSLQRLL-NR---HMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGVRPYK 479
C++C NFS+ NR H H + T G+ + T + TH PY
Sbjct: 98 CKLC--NFSIDMECGNRPPPHKVDHPKCHEHALTLMGREVSFTCNA---CGTHGERNPYV 152
Query: 480 CNLCEKSFTQRCSLESHCLKV----HGVQHTYAYKERRTKMYVCEEC 522
C C F C H + + H + H+Y K +VCE C
Sbjct: 153 CLPCSVMFHYDCIDLPHVININRHDHRISHSYPLKRGN---WVCEIC 196
>At2g26940.1 68415.m03231 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 286
Score = 29.5 bits (63), Expect = 6.4
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Query: 405 EEEKNKQV-LVSEDDPTKFVCRVCSKNFSLQRLLNRHMKCHSD 446
++EK K++ L D K C +C K F L HM+ H D
Sbjct: 101 KKEKEKEIDLARTDVEGKIRCCLCGKEFQTMHSLFGHMRRHPD 143
>At1g68480.1 68414.m07823 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 253
Score = 29.5 bits (63), Expect = 6.4
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 6/66 (9%)
Query: 380 LPLEFINGGHGVKNPLATEANARQREEEKNKQVLVSEDDPTK-FVCRVCSKNFSLQRLLN 438
LP +F G+ K L +++ QR+++ +K+ +D+ K + CR CS F + L
Sbjct: 13 LPDDFSKDGN--KQALEEGSSSGQRKKKGSKE---GKDESGKVYECRFCSLKFCKSQALG 67
Query: 439 RHMKCH 444
HM H
Sbjct: 68 GHMNRH 73
>At1g08290.1 68414.m00915 zinc finger (C2H2 type) protein (WIP3)
identical to WIP3 protein [Arabidopsis thaliana]
gi|18027014|gb|AAL55723; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 337
Score = 29.5 bits (63), Expect = 6.4
Identities = 26/120 (21%), Positives = 42/120 (35%), Gaps = 12/120 (10%)
Query: 419 PTKFVCRVCSKNFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGVRPY 478
P +F C +CSK F+ + HM H G F D + T +
Sbjct: 177 PMQFACSICSKTFNRYNNMQMHMWGH-----------GSEFRKGADSLKGTIQPAAILRL 225
Query: 479 KCNLCEKSFTQRCS-LESHCLKVHGVQHTYAYKERRTKMYVCEECGHTTSEPEEHYMHLK 537
C C + + S LK T+ ++ +K + C +CG + + H K
Sbjct: 226 PCYCCAEGCKNNINHPRSKPLKDFRTLQTHYKRKHGSKPFSCGKCGKALAVKGDWRTHEK 285
>At5g54050.1 68418.m06722 DC1 domain-containing protein
Length = 580
Score = 29.1 bits (62), Expect = 8.4
Identities = 30/105 (28%), Positives = 43/105 (40%), Gaps = 8/105 (7%)
Query: 392 KNPLATEANARQREEEKNKQVLVSEDDPTKFVCRVCSKNFSLQRL--LNRHMKCHSDVKR 449
++PL + +R + NK++ +DDP C VC + R L R +K D
Sbjct: 421 QHPLYFTLQSSRRCQACNKEI---KDDPLN--CTVCDEYSLCMRCATLPRKVKHRCDDHF 475
Query: 450 Y-LCTFCGKGFNDTFDLKRHTRTHTGVRPYKCNLCEKSFTQRCSL 493
LC G D + T+T VR Y C+ C S C L
Sbjct: 476 LSLCQGVGNASGDLWCDICETKTDPSVRYYTCDECGLSLHIDCVL 520
>At5g42840.1 68418.m05221 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 671
Score = 29.1 bits (62), Expect = 8.4
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 9/57 (15%)
Query: 473 TGVRPYKCNLCEKSFTQRCSLESHC------LKVHGVQHTYAYKERRTKMYVCEECG 523
TG Y C++C+ + RC++ +KVH +HT R +VC+ CG
Sbjct: 202 TGNLLYHCDICKFNLNMRCAIREPTPVALSNMKVH--EHTLTLMPRLIS-FVCDACG 255
>At5g38810.1 68418.m04693 F-box family protein predicted proteins,
Arabidopsis thaliana
Length = 259
Score = 29.1 bits (62), Expect = 8.4
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 428 SKNFSLQRLLNRHMKCHSDVKRYLCTF 454
S+N SL+ + HMK H D+ Y+C++
Sbjct: 78 SQNPSLEVDFHNHMKFHEDMNLYMCSY 104
>At5g16270.1 68418.m01900 Rad21/Rec8-like family protein weak
similarity to cohesion family protein SYN2 [Arabidopsis
thaliana] GI:12006360; contains Pfam profiles PF04824:
Conserved region of Rad21 / Rec8 like protein, PF04825:
N terminus of Rad21 / Rec8 like protein; supporting cDNA
gi|18157648|gb|AF400129.1|AF400129
Length = 1031
Score = 29.1 bits (62), Expect = 8.4
Identities = 23/86 (26%), Positives = 36/86 (41%), Gaps = 1/86 (1%)
Query: 161 SSNFDDPMVVEDVIDNYQFNATLTFPGSNEGILGNLSDSTEDFADLLNNPVESLTDSEVR 220
SS+ + M +D +D NA S E + ED + N P ++T EV
Sbjct: 257 SSSVREQMACDDHMDVEDLNAEEGIKSSGELNANEMPKRGEDLSSEYNAPESAVTPVEVD 316
Query: 221 ESSSISPDSVHNAVDIEALAEQVHLS 246
+S + N + E AE VH++
Sbjct: 317 KSQIDENVNTQNEPE-EERAEHVHVT 341
>At4g19660.1 68417.m02888 ankyrin repeat family protein / BTB/POZ
domain-containing protein contains Pfam domain, PF00023:
Ankyrin repeat and Pfam domain, PF00651: BTB/POZ domain
Length = 601
Score = 29.1 bits (62), Expect = 8.4
Identities = 14/40 (35%), Positives = 20/40 (50%)
Query: 195 NLSDSTEDFADLLNNPVESLTDSEVRESSSISPDSVHNAV 234
NL + + + LL NP TD+E+ +P SVH V
Sbjct: 34 NLEELSSNLEQLLTNPDCDYTDAEIIIEEEANPVSVHRCV 73
>At3g49930.1 68416.m05460 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 215
Score = 29.1 bits (62), Expect = 8.4
Identities = 18/65 (27%), Positives = 28/65 (43%), Gaps = 6/65 (9%)
Query: 387 GGHGV--KNPLATEANARQREEEKNKQV---LVSEDDPTKFVCRVCSKNFSLQRLLNRHM 441
GGH + P++ + N N + LV + T C +C K+F + L H
Sbjct: 110 GGHKTSHRKPVSVDVNNSNGTVTNNGNISNGLVGQSGKTHN-CSICFKSFPSGQALGGHK 168
Query: 442 KCHSD 446
+CH D
Sbjct: 169 RCHYD 173
>At3g27473.1 68416.m03434 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 662
Score = 29.1 bits (62), Expect = 8.4
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 9/57 (15%)
Query: 473 TGVRPYKCNLCEKSFTQRCSLESHC------LKVHGVQHTYAYKERRTKMYVCEECG 523
TG Y C++C+ + C++E+ LKVH +HT R ++C+ CG
Sbjct: 204 TGNLLYHCDICKFNLDMECAVENPIPVALSDLKVH--EHTLTLMPRLIS-FICDACG 257
>At3g24240.1 68416.m03042 leucine-rich repeat transmembrane protein
kinase, putative similar to CLV1 receptor kinase
GB:AAB58929 from [Arabidopsis thaliana]
Length = 1141
Score = 29.1 bits (62), Expect = 8.4
Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Query: 328 SLPSPGGNNSLDGNSHMENTPISPAAAVSLK-KGSVTDTKIQILQQRLGLPAELP 381
S P+P + + NS ++NTP + ++ +G +TD I+ + +L LP LP
Sbjct: 49 SSPTPSSLSLFNWNS-IDNTPCNNWTFITCSSQGFITDIDIESVPLQLSLPKNLP 102
>At2g13900.1 68415.m01542 DC1 domain-containing protein contains
Pfam protein PF03107 DC1 domain
Length = 661
Score = 29.1 bits (62), Expect = 8.4
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Query: 311 GFPFSSHPLDLDSPTGVSLPSPGGNNSLDGNSHM 344
G PF H L S T ++PS G ++DG+ H+
Sbjct: 16 GKPF--HIYTLSSQTDTTIPSSSGETAIDGDDHL 47
>At1g67970.1 68414.m07764 heat shock factor protein, putative (HSF5)
/ heat shock transcription factor, putative (HSTF5)
identical to heat shock transcription factor 5 (HSF5)
SP:Q9S7U5 from [Arabidopsis thaliana]; contains Pfam
profile: PF00447 HSF-type DNA-binding domain
Length = 374
Score = 29.1 bits (62), Expect = 8.4
Identities = 17/68 (25%), Positives = 31/68 (45%)
Query: 194 GNLSDSTEDFADLLNNPVESLTDSEVRESSSISPDSVHNAVDIEALAEQVHLSRQYYEKA 253
G S S+ A L + + DS S SP + ++ V ++ V L +Y++ +
Sbjct: 8 GGGSSSSSSVAPFLRKCYDMVDDSTTDSIISWSPSADNSFVILDTTVFSVQLLPKYFKHS 67
Query: 254 NYLAFANQ 261
N+ +F Q
Sbjct: 68 NFSSFIRQ 75
>At1g34790.1 68414.m04337 transparent testa 1 protein (TT1) / zinc
finger (C2H2 type) protein TT1 identical to transparent
testa 1 GI:18253279 from [Arabidopsis thaliana];
contains Pfam profile PF00096: Zinc finger, C2H2 type
Length = 303
Score = 29.1 bits (62), Expect = 8.4
Identities = 25/89 (28%), Positives = 37/89 (41%), Gaps = 6/89 (6%)
Query: 435 RLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCNLCEKSFTQRCSLE 494
R L H K K + C CGK D + H + + G R + C +C F + SL+
Sbjct: 214 RTLQTHYKRKHGHKPFSCRLCGKLLAVKGDWRTHEK-NCGKR-WVC-VCGSDFKHKRSLK 270
Query: 495 SHCLKV---HGVQHTYAYKERRTKMYVCE 520
H HG T ++E+ + V E
Sbjct: 271 DHVKAFGSGHGPYPTGLFEEQASNSSVSE 299
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.314 0.132 0.392
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,019,533
Number of Sequences: 28952
Number of extensions: 574557
Number of successful extensions: 1683
Number of sequences better than 10.0: 79
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 46
Number of HSP's that attempted gapping in prelim test: 1501
Number of HSP's gapped (non-prelim): 225
length of query: 576
length of database: 12,070,560
effective HSP length: 85
effective length of query: 491
effective length of database: 9,609,640
effective search space: 4718333240
effective search space used: 4718333240
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 62 (29.1 bits)
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