GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000987-TA|BGIBMGA000987-PA|undefined
         (62 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   1.3  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   1.3  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   1.3  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   1.3  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    20   1.7  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    20   1.7  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 1.3
 Identities = 8/20 (40%), Positives = 12/20 (60%)

Query: 5    FWIKKRLHEQQLDCRKPGLL 24
            F+I   LH Q+  C  PG++
Sbjct: 1015 FFIAACLHPQEFWCIVPGII 1034


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 1.3
 Identities = 8/20 (40%), Positives = 12/20 (60%)

Query: 5    FWIKKRLHEQQLDCRKPGLL 24
            F+I   LH Q+  C  PG++
Sbjct: 1015 FFIAACLHPQEFWCIVPGII 1034


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 1.3
 Identities = 8/20 (40%), Positives = 12/20 (60%)

Query: 5    FWIKKRLHEQQLDCRKPGLL 24
            F+I   LH Q+  C  PG++
Sbjct: 1015 FFIAACLHPQEFWCIVPGII 1034


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 1.3
 Identities = 8/20 (40%), Positives = 12/20 (60%)

Query: 5    FWIKKRLHEQQLDCRKPGLL 24
            F+I   LH Q+  C  PG++
Sbjct: 1015 FFIAACLHPQEFWCIVPGII 1034


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 20.2 bits (40), Expect = 1.7
 Identities = 8/20 (40%), Positives = 12/20 (60%)

Query: 5    FWIKKRLHEQQLDCRKPGLL 24
            F I   LH Q+ +C K G++
Sbjct: 988  FIIAALLHPQEFNCLKYGVI 1007


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 20.2 bits (40), Expect = 1.7
 Identities = 8/20 (40%), Positives = 12/20 (60%)

Query: 5    FWIKKRLHEQQLDCRKPGLL 24
            F I   LH Q+ +C K G++
Sbjct: 988  FIIAALLHPQEFNCLKYGVI 1007


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.324    0.138    0.454 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,553
Number of Sequences: 317
Number of extensions: 171
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of query: 62
length of database: 114,650
effective HSP length: 42
effective length of query: 20
effective length of database: 101,336
effective search space:  2026720
effective search space used:  2026720
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 34 (18.7 bits)
S2: 34 (17.8 bits)