GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000983-TA|BGIBMGA000983-PA|IPR002290|Serine/threonine
protein kinase, IPR008271|Serine/threonine protein kinase, active
site, IPR003280|K+ channel, two pore, IPR000719|Protein kinase,
IPR011009|Protein kinase-like, IPR013099|Ion transport 2
         (559 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...   180   4e-47
AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II ...   111   1e-26
AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C prot...    87   3e-19
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    68   2e-13
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    68   2e-13
AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                64   2e-12
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    54   4e-09
DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       26   0.71 
AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    23   5.0  
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    23   6.7  
L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.          23   8.8  
DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholi...    23   8.8  
DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholi...    23   8.8  

>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score =  180 bits (437), Expect = 4e-47
 Identities = 81/184 (44%), Positives = 122/184 (66%), Gaps = 4/184 (2%)

Query: 6   TCKDNMYVYFILPYEAGGELYTLIKKLGGFSEPLSQFYAAQLVLALEYLHHCSVVHRDLK 65
           T KD  Y+Y ++    GGEL+T+++  G F +  ++FY A +V A +YLH  ++++RDLK
Sbjct: 434 TFKDRKYLYMLMEACLGGELWTVLRDKGHFDDGTTRFYTACVVEAFDYLHSRNIIYRDLK 493

Query: 66  PENVLVSSSGYIKLADFGFCKIIK--SRTWTLCGTPEYLAPELILSKGYSFPVDWWALGV 123
           PEN+L+ S GY+KL DFGF K +    +TWT CGTPEY+APE+IL+KG+    D+W+LGV
Sbjct: 494 PENLLLDSQGYVKLVDFGFAKRLDHGRKTWTFCGTPEYVAPEVILNKGHDISADYWSLGV 553

Query: 124 LIYEMIAAFPPFYSSEPIKLYEKILTG--QFKTPENMTQVCKALVKNLLEVDPTKRYGSL 181
           L++E++   PPF   +P+K Y  IL G    + P ++T+   AL+K L   +P +R G  
Sbjct: 554 LMFELLTGTPPFTGGDPMKTYNIILKGIDAIEFPRSITRNATALIKKLCRDNPAERLGYQ 613

Query: 182 KAGV 185
           K G+
Sbjct: 614 KGGI 617


>AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II
           protein.
          Length = 190

 Score =  111 bits (268), Expect = 1e-26
 Identities = 58/159 (36%), Positives = 95/159 (59%), Gaps = 10/159 (6%)

Query: 35  FSEPLSQFYAAQLVLALEYLHHCSVVHRDLKPENVLVSSSGY---IKLADFGFCKIIK-- 89
           +SE  +     Q++ ++ + HH  VVHRDLKPEN+L++S      +KLADFG    ++  
Sbjct: 6   YSEADASHCIQQILESVHHCHHNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEVQGE 65

Query: 90  SRTWT-LCGTPEYLAPELILSKGYSFPVDWWALGVLIYEMIAAFPPFYSSEPIKLYEKIL 148
           ++ W    GTP YL+PE++  + Y  PVD WA GV++Y ++  +PPF+  +  +LY +I 
Sbjct: 66  AQAWFGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIK 125

Query: 149 TGQFKTP----ENMTQVCKALVKNLLEVDPTKRYGSLKA 183
           TG +  P    + +T   K L+  +L V+P+KR  + +A
Sbjct: 126 TGSYDYPSPEWDTVTPEAKNLINQMLTVNPSKRITASEA 164


>AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C
           protein.
          Length = 149

 Score = 87.4 bits (207), Expect = 3e-19
 Identities = 41/90 (45%), Positives = 61/90 (67%), Gaps = 3/90 (3%)

Query: 13  VYFILPYEAGGELYTLIKKLGGFSEPLSQFYAAQLVLALEYLHHCSVVHRDLKPENVLVS 72
           +YF++ Y  GG+L   I++ G F EP++ FYA+++ + L +LH   +V+RDLK +NVL+ 
Sbjct: 60  LYFVMEYVNGGDLMYQIQQCGKFKEPVAVFYASEIAIGLFFLHGRGIVYRDLKLDNVLLD 119

Query: 73  SSGYIKLADFGFCK--IIKSRTW-TLCGTP 99
             G+IK+ADFG CK  I   +T  T CGTP
Sbjct: 120 QDGHIKIADFGMCKEGISGDKTTKTFCGTP 149


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 68.1 bits (159), Expect = 2e-13
 Identities = 54/177 (30%), Positives = 84/177 (47%), Gaps = 14/177 (7%)

Query: 44  AAQLVLALEYLHHCSVVHRDLKPENVLVSSSGYIKLADFGFCKIIKSRTWTLCGTPEYLA 103
           A  ++  + YLH   +VHRD+K +NVL+      KL DFGFC        ++ GTP ++A
Sbjct: 703 ALDVLEGIRYLHSQGLVHRDVKLKNVLLDIENRAKLTDFGFCITEVMMLGSIVGTPVHMA 762

Query: 104 PELILSKGYSFPVDWWALGVLIYEMIA-------AFPPFYSSEPI-KLYEKILTGQFKTP 155
           PEL LS  Y   VD +A G+L + + A        F  F++ E +    +K L      P
Sbjct: 763 PEL-LSGHYDSSVDVYAFGILFWYLCAGHVRLPYTFEQFHNKELLWTSVKKALMIVGIRP 821

Query: 156 ENMTQV---CKALVKNLLEVDPTKRYGSLKAGVFRALEYPAEMAKQDFHRERVLSER 209
           E +      C  L++     +P+KR   L   +   LE   + AK+    + V S++
Sbjct: 822 ERLPSFDDECWRLMEQCWSGEPSKR--PLLGAIVPVLESIQQKAKRSKSLQEVSSDK 876


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 68.1 bits (159), Expect = 2e-13
 Identities = 54/177 (30%), Positives = 84/177 (47%), Gaps = 14/177 (7%)

Query: 44  AAQLVLALEYLHHCSVVHRDLKPENVLVSSSGYIKLADFGFCKIIKSRTWTLCGTPEYLA 103
           A  ++  + YLH   +VHRD+K +NVL+      KL DFGFC        ++ GTP ++A
Sbjct: 741 ALDVLEGIRYLHSQGLVHRDVKLKNVLLDIENRAKLTDFGFCITEVMMLGSIVGTPVHMA 800

Query: 104 PELILSKGYSFPVDWWALGVLIYEMIA-------AFPPFYSSEPI-KLYEKILTGQFKTP 155
           PEL LS  Y   VD +A G+L + + A        F  F++ E +    +K L      P
Sbjct: 801 PEL-LSGHYDSSVDVYAFGILFWYLCAGHVRLPYTFEQFHNKELLWTSVKKALMIVGIRP 859

Query: 156 ENMTQV---CKALVKNLLEVDPTKRYGSLKAGVFRALEYPAEMAKQDFHRERVLSER 209
           E +      C  L++     +P+KR   L   +   LE   + AK+    + V S++
Sbjct: 860 ERLPSFDDECWRLMEQCWSGEPSKR--PLLGAIVPVLESIQQKAKRSKSLQEVSSDK 914


>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 64.5 bits (150), Expect = 2e-12
 Identities = 32/91 (35%), Positives = 53/91 (58%), Gaps = 2/91 (2%)

Query: 47  LVLALEYLHHCSVVHRDLKPENVLVSSSGYIKLADFGFCKII--KSRTWTLCGTPEYLAP 104
           +  AL++ H+  +VH D+KP+N+L+S +G  KL DFG   +I   +      GTP Y AP
Sbjct: 164 ITCALQFCHNAGIVHADVKPKNILMSKNGQPKLTDFGSSVLIGAPNEIDKFYGTPGYTAP 223

Query: 105 ELILSKGYSFPVDWWALGVLIYEMIAAFPPF 135
           E+I     +   D ++LG++ ++M+    PF
Sbjct: 224 EVIKQNRPTPAADIYSLGIVAWQMLFRKLPF 254


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 53.6 bits (123), Expect = 4e-09
 Identities = 36/125 (28%), Positives = 64/125 (51%), Gaps = 7/125 (5%)

Query: 13  VYFILPYEAGGELYTLIKKLGGFSEPLSQFYAAQ-LVLALEYLHHCSVVHRDLKPENVLV 71
           V  I  +   G L T ++   G  + L      + +   ++YL   + VHRDL   NVLV
Sbjct: 709 VMIITEFMENGSLDTFLRANDGKFQVLQLVGMLRGIASGMQYLAEMNYVHRDLAARNVLV 768

Query: 72  SSSGYIKLADFGFCKIIKSRT---WTLCG---TPEYLAPELILSKGYSFPVDWWALGVLI 125
           +++   K+ADFG  + I+S T   +T  G      + APE I  + ++   D W++G++ 
Sbjct: 769 NAALVCKIADFGLSREIESATEGAYTTRGGKIPVRWTAPEAIAFRKFTSASDVWSMGIVC 828

Query: 126 YEMIA 130
           +E+++
Sbjct: 829 WEVMS 833


>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 26.2 bits (55), Expect = 0.71
 Identities = 16/66 (24%), Positives = 28/66 (42%)

Query: 263 TEERWSILQAVFFSSTVLTTIGYGNIVPVTFWGRLFCIAYALIGIPFTLTVIADLGRVFA 322
           T + W  +     +S + T + YG    +   G+L    + L+  P  L    + GRV  
Sbjct: 286 TIQIWQQIVKFSLNSILKTVVAYGGTSVMHQRGKLSAGCHILVATPGRLLDFVEKGRVKF 345

Query: 323 TCVSFI 328
           + V F+
Sbjct: 346 SSVQFL 351


>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 23.4 bits (48), Expect = 5.0
 Identities = 11/29 (37%), Positives = 15/29 (51%)

Query: 303 ALIGIPFTLTVIADLGRVFATCVSFIAKH 331
           A+  +P+T T      RVF T V  + KH
Sbjct: 226 AIPTVPYTETETETWTRVFNTLVDLVPKH 254


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 23.0 bits (47), Expect = 6.7
 Identities = 14/54 (25%), Positives = 26/54 (48%)

Query: 264 EERWSILQAVFFSSTVLTTIGYGNIVPVTFWGRLFCIAYALIGIPFTLTVIADL 317
           E+  ++  AV+F+  VL   G G   P +F  R+  + +A   +    +  A+L
Sbjct: 605 EDALNLSSAVWFAWGVLLNSGIGEGTPRSFSARVLGMVWAGFAMIIVASYTANL 658


>L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.
          Length = 150

 Score = 22.6 bits (46), Expect = 8.8
 Identities = 11/31 (35%), Positives = 18/31 (58%)

Query: 48 VLALEYLHHCSVVHRDLKPENVLVSSSGYIK 78
          VL L +  H  +V+ +L P N  ++S  YI+
Sbjct: 67 VLLLVWWDHKGIVYFELLPPNRTINSVVYIE 97


>DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 22.6 bits (46), Expect = 8.8
 Identities = 9/22 (40%), Positives = 14/22 (63%)

Query: 527 ELEAAVEAVIRDITSPVQQKPP 548
           +L  + EA I ++ SPV + PP
Sbjct: 452 DLSVSGEAGIEEVKSPVLRSPP 473


>DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 22.6 bits (46), Expect = 8.8
 Identities = 9/22 (40%), Positives = 14/22 (63%)

Query: 527 ELEAAVEAVIRDITSPVQQKPP 548
           +L  + EA I ++ SPV + PP
Sbjct: 452 DLSVSGEAGIEEVKSPVLRSPP 473


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.323    0.139    0.427 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,337
Number of Sequences: 429
Number of extensions: 6640
Number of successful extensions: 36
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 15
Number of HSP's gapped (non-prelim): 15
length of query: 559
length of database: 140,377
effective HSP length: 61
effective length of query: 498
effective length of database: 114,208
effective search space: 56875584
effective search space used: 56875584
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 46 (22.6 bits)