GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000982-TA|BGIBMGA000982-PA|IPR002290|Serine/threonine
protein kinase, IPR000961|Protein kinase, C-terminal,
IPR008271|Serine/threonine protein kinase, active site,
IPR000719|Protein kinase, IPR011009|Protein kinase-like
         (330 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    52   6e-09
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    24   1.8  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    24   1.8  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       23   4.1  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   5.4  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   9.4  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 52.0 bits (119), Expect = 6e-09
 Identities = 39/141 (27%), Positives = 67/141 (47%), Gaps = 7/141 (4%)

Query: 127 ASQVILALEYLHYCEVVHRDIKPENILIDSNGYLKLCDFGFCK-VLKKKTWTLCG----T 181
           A QV L +E+L    VVHRD+   N+L+  N  +K+ DFG  + V +   +   G     
Sbjct: 598 ARQVALGMEHLAKTRVVHRDLAARNVLVCENHTVKVSDFGLSRDVYQDNVYCKNGGGKLP 657

Query: 182 PEYLAPEVITSKGYSFSVDWWALGDLSFE-MEAGHPPFFASDPNKLYEKVLVGSYKC-PE 239
             ++A E +T + Y+   D W+ G L +E +  G  P+     ++L + +  G+    P 
Sbjct: 658 VRWMALESLTHQRYTTYSDVWSFGVLLWEIVTLGGTPYVGVHSSELLDFLKSGNRLARPA 717

Query: 240 NMSPECKNLLKGLLQVDPSKR 260
           N SP+   ++    +  P  R
Sbjct: 718 NCSPDLYAVMLNCWKECPKNR 738


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 13/56 (23%), Positives = 28/56 (50%)

Query: 52  KVVEKSVVVERNHAKHLILEKKILQCIQFPFVVTLDVAFKDNLYLYFILPYIAGGE 107
           ++ +   ++ R H K   + +KI        +V++ V+  D L+  + L Y+A G+
Sbjct: 225 QISDNLYILCRLHYKLTSVMQKINSAFSVQLLVSIGVSLFDVLFQAYYLYYVATGK 280


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 13/56 (23%), Positives = 28/56 (50%)

Query: 52  KVVEKSVVVERNHAKHLILEKKILQCIQFPFVVTLDVAFKDNLYLYFILPYIAGGE 107
           ++ +   ++ R H K   + +KI        +V++ V+  D L+  + L Y+A G+
Sbjct: 225 QISDNLYILCRLHYKLTSVMQKINSAFSVQLLVSIGVSLFDVLFQAYYLYYVATGK 280


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 10/21 (47%), Positives = 13/21 (61%)

Query: 63  NHAKHLILEKKILQCIQFPFV 83
           NH+K  I E K L C + PF+
Sbjct: 219 NHSKVHIREDKRLTCPKCPFI 239


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 8/33 (24%), Positives = 17/33 (51%)

Query: 111 YIQKYGIFSDSLTKFYASQVILALEYLHYCEVV 143
           Y   + +F   +  FY++ +I  +  L YC ++
Sbjct: 201 YFTLHLLFLPCIYYFYSAFIIFTIHLLFYCVLI 233


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 22/81 (27%), Positives = 33/81 (40%), Gaps = 9/81 (11%)

Query: 63  NHAKHLILEKKILQCIQFPFVVTLDV---AFKDNLYLYFILPYIAGGEMFTYIQKYGIF- 118
           NH K +   K +L C Q   ++T D+   +FK +    F+   I    +      Y IF 
Sbjct: 6   NHKKFINTTKLLLWCDQTIGLITFDINTPSFKLSKIRSFL--NITASAVLLPFAIYHIFM 63

Query: 119 ---SDSLTKFYASQVILALEY 136
                 L  FY S  IL + +
Sbjct: 64  HIVPTKLISFYKSTAILEIAF 84


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.322    0.141    0.439 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,875
Number of Sequences: 317
Number of extensions: 4173
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 3
Number of HSP's gapped (non-prelim): 6
length of query: 330
length of database: 114,650
effective HSP length: 57
effective length of query: 273
effective length of database: 96,581
effective search space: 26366613
effective search space used: 26366613
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 43 (21.4 bits)