Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000981-TA|BGIBMGA000981-PA|IPR003599|Immunoglobulin
subtype, IPR002345|Lipocalin, IPR009057|Homeodomain-like,
IPR004875|CENP-B protein
(1260 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0178 + 6195402-6199158,6199438-6200003 35 0.36
12_02_0588 - 20842209-20842337,20842464-20842560,20842620-208427... 35 0.48
03_06_0465 - 34130083-34130340,34130421-34130541,34131158-341311... 34 0.63
01_06_1300 + 36116511-36116636,36116672-36116734,36117782-361178... 34 0.63
01_07_0198 - 41918276-41918408,41918486-41918841,41919091-419192... 34 0.83
07_03_1696 - 28779455-28779733,28779813-28780074,28780805-287809... 33 1.1
05_01_0459 - 3637741-3637995,3638078-3638204,3641273-3641495,364... 33 1.1
04_04_0015 + 22164889-22165000,22165135-22165167,22165992-221662... 33 1.5
01_01_0833 - 6517489-6517503,6517762-6517827,6517938-6518006,651... 33 1.5
06_03_0478 - 21259376-21259465,21259862-21259924,21260025-212600... 33 1.9
12_02_0521 - 19955475-19956076,19957146-19958403 32 2.5
11_06_0656 + 25926192-25926289,25927530-25927659,25928248-259282... 32 3.4
11_03_0226 - 11908455-11908562,11915971-11916240,11916463-119169... 32 3.4
09_04_0232 - 15882589-15882720,15882799-15882889,15882987-158830... 32 3.4
08_02_0869 - 22031889-22032017,22032114-22032204,22032289-220323... 32 3.4
02_04_0268 + 21435231-21435240,21435330-21435558,21435778-214358... 32 3.4
07_01_0891 - 7447079-7447330,7447431-7447554,7449571-7449793,744... 31 4.4
01_01_0832 - 6500139-6500333,6500610-6500875,6501494-6501815,650... 31 4.4
08_02_0610 + 19307537-19308011,19308187-19310846 31 5.9
07_03_1219 + 24960043-24960133,24960304-24960336,24962258-249624... 31 5.9
07_01_0629 - 4695778-4696077,4696242-4696406,4696497-4696673,469... 31 5.9
04_03_0357 + 14852584-14853058,14853116-14855754 31 5.9
01_01_1018 - 8046819-8046876,8046995-8047212,8048099-8048177,804... 31 5.9
11_06_0496 - 24325587-24326143,24326658-24327495,24327612-24327764 31 7.8
04_04_1699 + 35462160-35462555,35463114-35463196,35463317-354633... 31 7.8
>03_02_0178 + 6195402-6199158,6199438-6200003
Length = 1440
Score = 35.1 bits (77), Expect = 0.36
Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Query: 806 CYCVVCMSAYSESRPREKWIQCTVCKMWAHEECTQVESL 844
C C+VC S + + W+ C VC W H +C SL
Sbjct: 1115 CMCIVC-SNFDMASNTCSWVGCDVCLHWCHTDCGLRHSL 1152
>12_02_0588 -
20842209-20842337,20842464-20842560,20842620-20842733,
20843140-20843749,20844739-20845462,20845542-20845620,
20845783-20845865,20846148-20846226,20846332-20846420,
20846499-20846591,20847288-20847337,20847417-20847600,
20849227-20849542,20849626-20849657
Length = 892
Score = 34.7 bits (76), Expect = 0.48
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
Query: 807 YCVVCMSAYSESRPREKWIQCTVCKMWAHEECTQVESLDTGYVQDTNAKKLHLYC 861
YC VC+ Y +S + C VC+ W H EC + + Y Q + + L C
Sbjct: 275 YCPVCLKVYRDSEVIPM-VCCDVCEKWVHIECDGIS--EEKYQQFQSDQNLQYTC 326
>03_06_0465 -
34130083-34130340,34130421-34130541,34131158-34131186,
34132259-34132382,34132594-34132816,34132948-34132980,
34133106-34133208
Length = 296
Score = 34.3 bits (75), Expect = 0.63
Identities = 23/96 (23%), Positives = 42/96 (43%), Gaps = 8/96 (8%)
Query: 746 TIYTDTPEKEEIRREYENRLKRTKAKQVKKRLDGGKTKTNARSRGKIKMHQXXXXXXXXX 805
T+Y +++ +R + K+K KR G+ K RSR + ++
Sbjct: 183 TVYEALVDRKHVR-DRSGVDSSGKSKHSTKRTGEGQVK---RSRVVAEEYEDDDEEHNET 238
Query: 806 CYCVVCMSAYSESRPREKWIQCTVCKMWAHEECTQV 841
+C C Y+ + E WI C +C+ W H +C ++
Sbjct: 239 -FCGTCGGLYNAN---EFWIGCDICERWFHGKCVRI 270
>01_06_1300 + 36116511-36116636,36116672-36116734,36117782-36117833,
36118144-36118224,36118651-36118775,36118831-36118934,
36119487-36119615,36119899-36121054
Length = 611
Score = 34.3 bits (75), Expect = 0.63
Identities = 21/73 (28%), Positives = 30/73 (41%), Gaps = 1/73 (1%)
Query: 1029 GISFSYATDEDSGEWTCHMGPRRQMG-VELTDKLVVRVTGPLAASQKEIPTVIDGSATLF 1087
G+ + A D WT + G EL+ K R GPL + V+ S++LF
Sbjct: 353 GLEVNSAPDHTGNSWTIQLEAAPSKGEAELSLKNEARSLGPLCYQIPNMEDVVPVSSSLF 412
Query: 1088 CKTSNGNRPLEYC 1100
GN E+C
Sbjct: 413 SDHLTGNHTSEHC 425
>01_07_0198 -
41918276-41918408,41918486-41918841,41919091-41919237,
41919666-41921789,41922150-41922344,41922488-41922568,
41923325-41923414,41923507-41923593,41923914-41923961
Length = 1086
Score = 33.9 bits (74), Expect = 0.83
Identities = 17/59 (28%), Positives = 31/59 (52%)
Query: 623 TSPSILTLEPQEEMEELSNEALLVQQPTENMPQCSQVLDKEQENIIANPKLLIILPGHE 681
TSP ++ + + + LS+E L ++ EN+ + S +L+ E E K I++ G E
Sbjct: 849 TSPRVIANDAKPTNDSLSHEVLNLRSQVENLTRKSHLLEVELERTTKQLKEAIVIAGEE 907
>07_03_1696 -
28779455-28779733,28779813-28780074,28780805-28780956,
28781765-28781961,28782258-28782462,28782737-28782982,
28783603-28783719,28784206-28784397,28784480-28784693,
28784835-28784926,28784952-28785001,28785494-28785812,
28785908-28786068,28786407-28786650,28787212-28787467,
28787634-28787834,28788568-28788910,28789003-28789064,
28789645-28789851,28790170-28790978
Length = 1535
Score = 33.5 bits (73), Expect = 1.1
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 810 VCMSAYSESRPREKWIQCTVCKMWAHEECTQVESLDTGYVQD 851
+C +A S + WIQC +C W H C + +V D
Sbjct: 408 ICGAASVTSAYQGIWIQCDICDAWQHASCVGYSPKEEMHVDD 449
>05_01_0459 -
3637741-3637995,3638078-3638204,3641273-3641495,
3641592-3641624,3641716-3641854
Length = 258
Score = 33.5 bits (73), Expect = 1.1
Identities = 26/111 (23%), Positives = 39/111 (35%), Gaps = 9/111 (8%)
Query: 737 NRGRKTRKSTIYTDTPEKEEI---RREYENRLKRTKAKQVKKRLDGGKTKTNARSRGKIK 793
NR + R + D P E+ R+ + R + + ++ T AR IK
Sbjct: 128 NRNDRKRLFGMMNDLPTVYEVVSGSRQSKERDRSGMDNSSRNKISSKHTSDVARVENNIK 187
Query: 794 MHQXXXXXXX---XXCYCVVCMSAYSESRPREKWIQCTVCKMWAHEECTQV 841
C C YS E WI C VC+ W H +C ++
Sbjct: 188 EEDEGYDEDDGDHSETLCGTCGGIYSAD---EFWIGCDVCERWYHGKCVKI 235
>04_04_0015 +
22164889-22165000,22165135-22165167,22165992-22166220,
22166709-22166826,22166910-22167188
Length = 256
Score = 33.1 bits (72), Expect = 1.5
Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 3/34 (8%)
Query: 808 CVVCMSAYSESRPREKWIQCTVCKMWAHEECTQV 841
C C AY+ E WI C +C+ W H +C ++
Sbjct: 203 CGACGEAYANG---EFWICCDICETWFHGKCVRI 233
>01_01_0833 -
6517489-6517503,6517762-6517827,6517938-6518006,
6518104-6518214,6518319-6518526,6518598-6518653,
6519048-6519689
Length = 388
Score = 33.1 bits (72), Expect = 1.5
Identities = 11/34 (32%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 807 YCVVCMSAYSESRPREKWIQCTVCKMWAHEECTQ 840
YC +C + + W+ C C++W H EC Q
Sbjct: 346 YCGICKKIWHHT-DGGNWVCCDECQIWVHVECDQ 378
>06_03_0478 - 21259376-21259465,21259862-21259924,21260025-21260066,
21260180-21260461,21261084-21261587,21261973-21261981,
21262122-21262196,21262375-21262449,21262557-21263494,
21263577-21263607,21263694-21263979,21264691-21264905,
21265329-21265437,21265556-21265611,21265730-21265822,
21266348-21266393,21266496-21267221,21267489-21267550,
21267738-21268013,21268604-21268735,21268835-21268909
Length = 1394
Score = 32.7 bits (71), Expect = 1.9
Identities = 32/155 (20%), Positives = 60/155 (38%), Gaps = 5/155 (3%)
Query: 999 GTQYTPVPRSDDSDDSLFWYAGESLQTGDCGISFSYATD-EDSGEWTCHMGPRRQMGVEL 1057
G+ T S + W A L +G +F+ T + E H+ + V
Sbjct: 504 GSVITSGKTSSTKISEIIWNAKVLLMSGMSNSAFADITSLRSTDERVVHLNNILKFAVFK 563
Query: 1058 TDKLVVRVTGPLAASQKEIPTVIDGSATLFCKTSNGNRP----LEYCRFLSPKFVGISID 1113
D+ + + GP A+ V+D S + N R ++ F ++ I+
Sbjct: 564 RDRSLFAIGGPWNAAIDGGDPVVDPSCLIQTAIRNAIRSSVPIIKSTNFTLDNWLSITAG 623
Query: 1114 PSVTKENAILGRYFFTTGRDLDYGDCSLTIISVTN 1148
+VT N +L ++ G+D + +T++ V N
Sbjct: 624 VTVTNANILLQIHYNRVGKDGLFSHKEITVVFVPN 658
>12_02_0521 - 19955475-19956076,19957146-19958403
Length = 619
Score = 32.3 bits (70), Expect = 2.5
Identities = 12/33 (36%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Query: 806 CYCVVCMSAYSESRPREKWIQCTVCKMWAHEEC 838
C CV+C E +WI C C W H +C
Sbjct: 282 CMCVICNKFDFEVNTC-RWIGCDFCSHWTHTDC 313
>11_06_0656 +
25926192-25926289,25927530-25927659,25928248-25928294,
25929274-25929388,25929504-25929753,25930079-25930239,
25930372-25930567,25930672-25930836,25930918-25931070,
25931160-25931248,25931385-25931423,25931460-25931681,
25933503-25934165
Length = 775
Score = 31.9 bits (69), Expect = 3.4
Identities = 20/77 (25%), Positives = 40/77 (51%), Gaps = 5/77 (6%)
Query: 82 GNYSITGWSEVHVQDEIPEYHPTPIALQDGERHAHVDLTTLNSAYCLVEQPFSDISFVPG 141
G++ + G V +I + P +A++D E+HA T+N + +E+P + ++
Sbjct: 487 GDFLLHGPQAVGDTGDIHFHLPGELAVEDTEKHAVA--ATVNKS---LEKPVAATAYGLP 541
Query: 142 HCSVTLDRTTRAVQGNW 158
HC ++ +T A+Q W
Sbjct: 542 HCRLSCFQTISAIQVGW 558
>11_03_0226 -
11908455-11908562,11915971-11916240,11916463-11916946,
11917148-11918060,11918628-11919300
Length = 815
Score = 31.9 bits (69), Expect = 3.4
Identities = 20/71 (28%), Positives = 30/71 (42%)
Query: 432 RYQDHFVRDGPIGSAGSANPSGWMQDESFMHFLDHFRKHTNASPSRKILLVLDNHSSHIH 491
R +++F+ D P + SG Q+ H LDH + + L S +IH
Sbjct: 699 RLEENFLGDHPFTDEEECSVSGDEQEVCDNHILDHLCGKVMEEVMDEADMHLSCDSDYIH 758
Query: 492 INALDFCKTNG 502
IN CK +G
Sbjct: 759 INHRKGCKKSG 769
>09_04_0232 -
15882589-15882720,15882799-15882889,15882987-15883087,
15883494-15883592,15883693-15883830,15883918-15884508,
15884819-15884989,15885068-15885203,15885561-15885592,
15886280-15886336,15886434-15886686,15886762-15886850,
15887181-15887234,15887498-15887689,15887777-15887938
Length = 765
Score = 31.9 bits (69), Expect = 3.4
Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 7/63 (11%)
Query: 808 CVVCMSAYSESRPREKWIQCTVCKMWAHEECTQVESLDT--GYVQDTNAKKLHLYCNILH 865
C++C S S P + W+ C +C WAH C + + L T Y + + + +C++ +
Sbjct: 687 CLLCHS----SAPGD-WVNCGLCGEWAHFGCDRRQGLGTFKDYAKTDGLEYICPHCSLAN 741
Query: 866 TQK 868
+K
Sbjct: 742 YKK 744
>08_02_0869 -
22031889-22032017,22032114-22032204,22032289-22032389,
22033262-22033303,22033393-22033491,22033616-22033753,
22033853-22034428,22034897-22035070,22035155-22035290,
22035694-22035725,22036873-22037125,22037216-22037304,
22037771-22037824,22038801-22038992,22039065-22039229
Length = 756
Score = 31.9 bits (69), Expect = 3.4
Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 7/63 (11%)
Query: 808 CVVCMSAYSESRPREKWIQCTVCKMWAHEECTQVESLDT--GYVQDTNAKKLHLYCNILH 865
C++C S S P + W+ C +C WAH C + + L T Y + + + +C++ +
Sbjct: 679 CLLCHS----SAPGD-WVNCGLCGEWAHFGCDRRQGLGTFKDYAKTDGLEYICPHCSLAN 733
Query: 866 TQK 868
+K
Sbjct: 734 YKK 736
>02_04_0268 +
21435231-21435240,21435330-21435558,21435778-21435898,
21435992-21436264
Length = 210
Score = 31.9 bits (69), Expect = 3.4
Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 3/34 (8%)
Query: 808 CVVCMSAYSESRPREKWIQCTVCKMWAHEECTQV 841
C C Y+ E WI C VC+ W H +C ++
Sbjct: 157 CGACGETYANG---EFWICCDVCEKWFHGKCVRI 187
>07_01_0891 -
7447079-7447330,7447431-7447554,7449571-7449793,
7449891-7449923,7450042-7450144
Length = 244
Score = 31.5 bits (68), Expect = 4.4
Identities = 11/34 (32%), Positives = 18/34 (52%), Gaps = 3/34 (8%)
Query: 808 CVVCMSAYSESRPREKWIQCTVCKMWAHEECTQV 841
C C Y+ + E WI C +C+ W H +C ++
Sbjct: 190 CGTCGGRYNAN---EFWIGCDICERWFHGKCVRI 220
>01_01_0832 -
6500139-6500333,6500610-6500875,6501494-6501815,
6501915-6502156,6502229-6502457,6503020-6503184,
6503279-6503605,6504150-6504191,6504333-6504400,
6504748-6504934,6506249-6506311,6506748-6506790,
6506919-6507019,6507110-6507184,6507359-6507445,
6507593-6507682,6507906-6507992,6508585-6508783,
6509113-6509177,6509502-6509606,6509726-6509871,
6510100-6510224,6510335-6510437,6510482-6510596,
6510734-6510869,6511298-6511387,6511484-6511578,
6511698-6511763,6511868-6511936,6512034-6512147,
6512241-6512448,6512545-6512600,6512818-6513552
Length = 1671
Score = 31.5 bits (68), Expect = 4.4
Identities = 10/32 (31%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Query: 807 YCVVCMSAYSESRPREKWIQCTVCKMWAHEEC 838
YC +C + + W+ C C++W H EC
Sbjct: 378 YCGICKKIWHHT-DGGNWVCCDECQIWVHVEC 408
>08_02_0610 + 19307537-19308011,19308187-19310846
Length = 1044
Score = 31.1 bits (67), Expect = 5.9
Identities = 15/38 (39%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Query: 744 KSTIYTDTPE--KEEIRREYENRLKRTKAKQVKKRLDG 779
K+T+ +D E KEE+RR+++ L R K ++ +RL G
Sbjct: 412 KATLRSDNQEMSKEELRRQHQAELARQKNEETARRLAG 449
>07_03_1219 +
24960043-24960133,24960304-24960336,24962258-24962486,
24963183-24963309,24963530-24963869,24964806-24965095
Length = 369
Score = 31.1 bits (67), Expect = 5.9
Identities = 11/34 (32%), Positives = 17/34 (50%), Gaps = 3/34 (8%)
Query: 808 CVVCMSAYSESRPREKWIQCTVCKMWAHEECTQV 841
C C +Y E WI C +C+ W H +C ++
Sbjct: 212 CGACGESYGAD---EFWICCDICEKWFHGKCVKI 242
>07_01_0629 -
4695778-4696077,4696242-4696406,4696497-4696673,
4697157-4697455,4697589-4697751,4697897-4698088,
4698211-4698385,4698527-4698741,4698948-4699385
Length = 707
Score = 31.1 bits (67), Expect = 5.9
Identities = 15/52 (28%), Positives = 31/52 (59%), Gaps = 3/52 (5%)
Query: 616 LEDKTPPTSPSILTLEPQEEMEELSNEALLVQ--QPTENMPQCSQVLDKEQE 665
+ED P PS+ ++ EE L+ E +++ +P E +P+CS+++ ++ E
Sbjct: 590 IEDDAPKRKPSLEEIDALEEAR-LAIEYIVIPGGEPVELLPRCSEIVARQLE 640
>04_03_0357 + 14852584-14853058,14853116-14855754
Length = 1037
Score = 31.1 bits (67), Expect = 5.9
Identities = 15/38 (39%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Query: 744 KSTIYTDTPE--KEEIRREYENRLKRTKAKQVKKRLDG 779
K+T+ +D E KEE+RR+++ L R K ++ +RL G
Sbjct: 452 KATLRSDNQEMSKEELRRQHQAELARQKNEETARRLAG 489
>01_01_1018 -
8046819-8046876,8046995-8047212,8048099-8048177,
8048455-8048540,8048698-8048983,8049063-8049205,
8049308-8049508,8049626-8049754,8050463-8050738,
8050823-8051098,8051364-8052364,8052452-8052634,
8052865-8052937,8053205-8053313,8053622-8053785
Length = 1093
Score = 31.1 bits (67), Expect = 5.9
Identities = 11/26 (42%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Query: 814 AYSESRPR-EKWIQCTVCKMWAHEEC 838
+Y+E+ E W+QC CK W H+ C
Sbjct: 592 SYAETDAEAEWWVQCDKCKAWQHQIC 617
>11_06_0496 - 24325587-24326143,24326658-24327495,24327612-24327764
Length = 515
Score = 30.7 bits (66), Expect = 7.8
Identities = 12/33 (36%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Query: 806 CYCVVCMSAYSESRPREKWIQCTVCKMWAHEEC 838
C CVVC + + +WI C C W H C
Sbjct: 193 CMCVVC-NGFDFDVNTCRWIGCDGCSHWTHAGC 224
>04_04_1699 +
35462160-35462555,35463114-35463196,35463317-35463378,
35463745-35463806,35463932-35463991,35464079-35464111,
35464196-35464261,35464349-35464393
Length = 268
Score = 30.7 bits (66), Expect = 7.8
Identities = 14/35 (40%), Positives = 18/35 (51%)
Query: 728 PKAPPRKLTNRGRKTRKSTIYTDTPEKEEIRREYE 762
P PPR+ RG R YTD E+E+ + E E
Sbjct: 60 PPPPPRRTRTRGPPARPQQSYTDDDEEEDDQDEEE 94
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.133 0.403
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,371,439
Number of Sequences: 37544
Number of extensions: 1544153
Number of successful extensions: 3441
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 3432
Number of HSP's gapped (non-prelim): 30
length of query: 1260
length of database: 14,793,348
effective HSP length: 91
effective length of query: 1169
effective length of database: 11,376,844
effective search space: 13299530636
effective search space used: 13299530636
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 66 (30.7 bits)
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