GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000981-TA|BGIBMGA000981-PA|IPR003599|Immunoglobulin
subtype, IPR002345|Lipocalin, IPR009057|Homeodomain-like,
IPR004875|CENP-B protein
         (1260 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69981-1|CAA93821.1|  327|Anopheles gambiae maltase precursor pr...    26   5.4  
AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    25   9.5  

>Z69981-1|CAA93821.1|  327|Anopheles gambiae maltase precursor
           protein.
          Length = 327

 Score = 26.2 bits (55), Expect = 5.4
 Identities = 7/22 (31%), Positives = 16/22 (72%)

Query: 521 RSVFGPLKKAVNSTCDGWMRSH 542
           ++  GP+++  +S CD W++S+
Sbjct: 302 KAQIGPVERVYSSICDSWLQSN 323


>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
            protein.
          Length = 596

 Score = 25.4 bits (53), Expect = 9.5
 Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 3/48 (6%)

Query: 1215 YWKKTDSSSRTDNVSLQTFSAAS---WRKDSDSSGSANGSQKAGSRDI 1259
            Y  + D +  +D V + T +  S   + KD+  SGS  GS + G +DI
Sbjct: 527  YDPEADRAMASDLVKILTQAGQSVPDFLKDAGGSGSYMGSSQFGGKDI 574


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.318    0.133    0.403 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,285,149
Number of Sequences: 2123
Number of extensions: 53506
Number of successful extensions: 116
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 115
Number of HSP's gapped (non-prelim): 2
length of query: 1260
length of database: 516,269
effective HSP length: 72
effective length of query: 1188
effective length of database: 363,413
effective search space: 431734644
effective search space used: 431734644
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 53 (25.4 bits)