Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000981-TA|BGIBMGA000981-PA|IPR003599|Immunoglobulin
subtype, IPR002345|Lipocalin, IPR009057|Homeodomain-like,
IPR004875|CENP-B protein
(1260 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF016452-4|AAB66015.1| 539|Caenorhabditis elegans Hypothetical ... 42 0.004
Z72511-3|CAA96657.1| 610|Caenorhabditis elegans Hypothetical pr... 38 0.045
Z35595-5|CAA84636.1| 952|Caenorhabditis elegans Hypothetical pr... 38 0.045
AC006641-4|AAF39819.2| 477|Caenorhabditis elegans Hypothetical ... 38 0.060
Z35400-1|CAA84584.1| 532|Caenorhabditis elegans putative transp... 34 0.56
U12433-1|AAA20582.1| 532|Caenorhabditis elegans putative transp... 34 0.56
L00665-1|AAA28148.1| 537|Caenorhabditis elegans protein ( Caeno... 34 0.56
AF098501-10|AAC67405.3| 1744|Caenorhabditis elegans Mtm (myotubu... 33 0.98
AC084159-14|AAK39369.2| 480|Caenorhabditis elegans Hypothetical... 33 1.3
Z54216-7|CAB76416.2| 319|Caenorhabditis elegans Hypothetical pr... 32 3.0
Z35602-1|CAA84669.1| 1469|Caenorhabditis elegans Hypothetical pr... 31 5.2
L35274-1|AAA62647.1| 1469|Caenorhabditis elegans chromosome cond... 31 5.2
AL031630-14|CAA20993.1| 185|Caenorhabditis elegans Hypothetical... 31 5.2
AF016666-2|AAB66084.1| 207|Caenorhabditis elegans Hypothetical ... 31 5.2
Z70753-2|CAA94760.1| 275|Caenorhabditis elegans Hypothetical pr... 31 6.9
AF134186-1|AAD55361.1| 1359|Caenorhabditis elegans XNP-1 protein. 31 6.9
AF002197-2|AAB53983.2| 486|Caenorhabditis elegans Hypothetical ... 31 6.9
AF000196-11|AAC24256.1| 1359|Caenorhabditis elegans Human xnp ge... 31 6.9
>AF016452-4|AAB66015.1| 539|Caenorhabditis elegans Hypothetical
protein T05H4.9 protein.
Length = 539
Score = 41.5 bits (93), Expect = 0.004
Identities = 56/257 (21%), Positives = 94/257 (36%), Gaps = 14/257 (5%)
Query: 297 TVKYNLSRPRTWDDNGMAGEEWFRMFMKRNSELSVRAAQATS--LSRATSFNRKNVDAFY 354
++ ++ T +N +A W + K + +S R + + R RK D F
Sbjct: 178 SIAREINNNETKVENFIASSNWVSKWKKSHRIVSRRITKFVTRRCMRDKVAIRKTADDFV 237
Query: 355 DNLANVMDRYKFEPQNIYNVDETGITTVQKPDRIIARRGARQVGSVTSAERGAL--VTXX 412
+ M F+P I+N D+TGI R +A G + V + A+ T
Sbjct: 238 RDTKREMS--PFDPYMIFNADQTGIQKELYGARSLAFLGDKVVERLVQAKSSLTHSFTFL 295
Query: 413 XXXXXXXXXXPPFFVFPRVRYQDHFVRDGPIGSAGS----ANPSGWMQDESFMHFLDHFR 468
P F+ F PI + A S M E ++
Sbjct: 296 PMIFMNGSLGPKAFIEMSEPATGCFPPSRPIPKCPNLEVRAAKSHIMGKELMCDWIKTCV 355
Query: 469 KHTNASPSRKILLVLDNHSSHIHINALDFCKTNG--IVMLSFPPHCSHKLQPLDRSVFGP 526
H AS +++L+++D+ S + C G + + + PPH + +QPLD GP
Sbjct: 356 AH--ASLPKRLLMIVDSWPSFKDHATIQQCFPPGYDVTIKNIPPHTTSMIQPLDSHWNGP 413
Query: 527 LKKAVNSTCDGWMRSHP 543
K + + HP
Sbjct: 414 WKNLIKKFTTHVLNFHP 430
>Z72511-3|CAA96657.1| 610|Caenorhabditis elegans Hypothetical
protein F55A11.3 protein.
Length = 610
Score = 37.9 bits (84), Expect = 0.045
Identities = 44/169 (26%), Positives = 64/169 (37%), Gaps = 11/169 (6%)
Query: 609 PIQNINTLE---DKTPPTSPSILTLEPQE--EMEELSNEALLVQQPTENMPQCSQVLDKE 663
P+ +NT + +TPP +PS L +E ME S EALL + + M +L+
Sbjct: 448 PLPQVNTTQGTSSETPPVNPSYSQLSTEELRRMEGESREALLAR--LQAMDNIMVLLESA 505
Query: 664 QENIIANPKLLIILPGHEXXXXXXXXXXXXXXXXXXXXVLTTQTGSIMTLTTPSLFSPEV 723
Q +I +L + P V + + T + PS+F E
Sbjct: 506 QMQMI---QLATVTPIRPRPVVPSDESEQEAPGPSTDQVTSEEQEIPATSSAPSIFRTES 562
Query: 724 IRPLPKAPPRKLTNRGRKTRKSTIYTDTPEKEEIRREYENRLKRTKAKQ 772
AP T +T T TPE EE+R+ RL A Q
Sbjct: 563 PSTSSTAPSTSSPVTASST-PTTSSTRTPEAEEVRQRRLARLLGENANQ 610
>Z35595-5|CAA84636.1| 952|Caenorhabditis elegans Hypothetical
protein C01G6.5 protein.
Length = 952
Score = 37.9 bits (84), Expect = 0.045
Identities = 11/34 (32%), Positives = 21/34 (61%)
Query: 811 CMSAYSESRPREKWIQCTVCKMWAHEECTQVESL 844
C+SA E R +W+ C++C W H C +++++
Sbjct: 873 CISAKYEKRKNLQWVSCSICNQWFHVWCVRLDNV 906
>AC006641-4|AAF39819.2| 477|Caenorhabditis elegans Hypothetical
protein F45D11.6 protein.
Length = 477
Score = 37.5 bits (83), Expect = 0.060
Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 2/94 (2%)
Query: 309 DDNGMAGEEWFRMFMKRNSELSVRAAQATSLSRATSFNRKNVDAFYDNLANVMDRYKFEP 368
+D+ A W + FM+R+ LS R A T F +K VD + + + + K+
Sbjct: 118 EDDFKASTGWLQKFMRRH-HLSTRRATTTCQKEPDEFAKKIVD-YVLFVEKMRLQNKYTD 175
Query: 369 QNIYNVDETGITTVQKPDRIIARRGARQVGSVTS 402
+I+ DET + + +GAR+VG +
Sbjct: 176 THIFAADETAVYLDFSNSLTLNEKGAREVGKTNT 209
>Z35400-1|CAA84584.1| 532|Caenorhabditis elegans putative
transposase protein.
Length = 532
Score = 34.3 bits (75), Expect = 0.56
Identities = 46/227 (20%), Positives = 90/227 (39%), Gaps = 14/227 (6%)
Query: 314 AGEEWFRMFMKRNSELSVRAAQATSLSRATSFNRKNVDAFYDNLANVM--DRYKFEPQNI 371
A + W + + K N +S T ++RA N++ + + + +P +
Sbjct: 196 ASDGWLKKWKKTNGLVSRHVT--TFITRANYVNKELTEQAAKKFVEEVKAELATLDPDVV 253
Query: 372 YNVDETGITTVQKPDRIIARRGARQVGSVTSAERGAL--VTXXXXXXXXXXXXPPFFVFP 429
YN D++G T Q R +A +G ++V + ++ T P +V
Sbjct: 254 YNCDQSGFTKEQYCKRTLAPKGVKRVERLVQSKDALTHSYTILPMLSASGKLAPMLYVVL 313
Query: 430 RVRYQDHFVRDG---PIGSAGSANPSGWMQDESFMHFLDHFRKHTNASPSRKILLVLDNH 486
+ + F + G P AN S M + + +++ + S +++L+LD
Sbjct: 314 QEK-GGKFPKKGHFSPDNLIIRANTSHIMNKQLMVDWVE--SAVCDPSMPTEVVLLLDAW 370
Query: 487 SSHIHINALDFCKTNG--IVMLSFPPHCSHKLQPLDRSVFGPLKKAV 531
+ + + +G + + S PP + +QP D F PLK V
Sbjct: 371 PAWKNEGDVQAAALSGNTVHVRSIPPGATSFIQPCDLYFFCPLKNFV 417
>U12433-1|AAA20582.1| 532|Caenorhabditis elegans putative
transposase protein.
Length = 532
Score = 34.3 bits (75), Expect = 0.56
Identities = 46/227 (20%), Positives = 90/227 (39%), Gaps = 14/227 (6%)
Query: 314 AGEEWFRMFMKRNSELSVRAAQATSLSRATSFNRKNVDAFYDNLANVM--DRYKFEPQNI 371
A + W + + K N +S T ++RA N++ + + + +P +
Sbjct: 196 ASDGWLKKWKKTNGLVSRHVT--TFITRANYVNKELTEQAAKKFVEEVKAELATLDPDVV 253
Query: 372 YNVDETGITTVQKPDRIIARRGARQVGSVTSAERGAL--VTXXXXXXXXXXXXPPFFVFP 429
YN D++G T Q R +A +G ++V + ++ T P +V
Sbjct: 254 YNCDQSGFTKEQYCKRTLAPKGVKRVERLVQSKDALTHSYTILPMLSASGKLAPMLYVVL 313
Query: 430 RVRYQDHFVRDG---PIGSAGSANPSGWMQDESFMHFLDHFRKHTNASPSRKILLVLDNH 486
+ + F + G P AN S M + + +++ + S +++L+LD
Sbjct: 314 QEK-GGKFPKKGHFSPDNLIIRANTSHIMNKQLMVDWVE--SAVCDPSMPTEVVLLLDAW 370
Query: 487 SSHIHINALDFCKTNG--IVMLSFPPHCSHKLQPLDRSVFGPLKKAV 531
+ + + +G + + S PP + +QP D F PLK V
Sbjct: 371 PAWKNEGDVQAAALSGNTVHVRSIPPGATSFIQPCDLYFFCPLKNFV 417
>L00665-1|AAA28148.1| 537|Caenorhabditis elegans protein (
Caenorhabditis eleganstransposable element Tc4, complete
cds. ).
Length = 537
Score = 34.3 bits (75), Expect = 0.56
Identities = 50/257 (19%), Positives = 96/257 (37%), Gaps = 12/257 (4%)
Query: 284 LTKKDVMKLAYELTVKYNLSRPRTWDDNGMAGEEWFRMFMKRNSELSVRAAQATSLSRAT 343
L D+M +A E+ + + + A + W + + + +S R + +
Sbjct: 170 LHDSDLMAMALEINTREMKLQKQNEMKLQKASQSWITRWKQSHRIVSRRVTKFVTRKCLI 229
Query: 344 SFN--RKNVDAFYDNLANVMDRYKFEPQNIYNVDETGITTVQKPDRIIARRGARQVGSVT 401
+ + +KN D F N + Y P ++N D+TGI P R +A G + V +
Sbjct: 230 NKDAIKKNADDFVKNARTEISNY--HPSMVFNCDQTGIQKELYPARSLAFMGEKTVERLA 287
Query: 402 SAERGAL--VTXXXXXXXXXXXXPPFFVFPRVRYQDHFVRDGPIGSAGSAN-PSGWMQDE 458
++ T P F+ + F PI + + +G+
Sbjct: 288 QSKSSLTHSFTFLPMIFLDGSMGPKAFMV-IAEPKGQFPPSRPIPNCPNLEVRAGYKTHI 346
Query: 459 SFMHFLDHFRKHTNASPS--RKILLVLDNHSSHIHINALDFCKTNG--IVMLSFPPHCSH 514
+ F + PS +K+ ++LD+ + + NG +V+ + P H +
Sbjct: 347 MTKQLMCDFFESCVFIPSVPKKLYIMLDSWPAFKDHTTIKNLVPNGHDVVIRNIPEHTTG 406
Query: 515 KLQPLDRSVFGPLKKAV 531
+QPLD P K +
Sbjct: 407 MIQPLDVYWNAPWKSLI 423
>AF098501-10|AAC67405.3| 1744|Caenorhabditis elegans Mtm
(myotubularin) family protein 5 protein.
Length = 1744
Score = 33.5 bits (73), Expect = 0.98
Identities = 26/109 (23%), Positives = 43/109 (39%), Gaps = 11/109 (10%)
Query: 734 KLTNRGRKTRKSTIYTDTPEKEEIRREYENRLKRTKAKQVKKRLDGGKTKTNARSRGKIK 793
KL N R +PE++ + L+++ ++ D KT TN S GK
Sbjct: 1481 KLNNTDIDERHLNRRVRSPERDPANMDMIRLLQKSYLTELFDASDR-KTTTNGESNGKET 1539
Query: 794 MHQXXXXXXXXX----CYCVVCMSAYSESRPREKWIQCTVCKMWAHEEC 838
+H+ CYC ++ +S K + C C++ HE C
Sbjct: 1540 IHELTPFTVGARPVQCCYCTNILTRWS------KAVHCKKCRIHVHEGC 1582
>AC084159-14|AAK39369.2| 480|Caenorhabditis elegans Hypothetical
protein Y73B3A.6 protein.
Length = 480
Score = 33.1 bits (72), Expect = 1.3
Identities = 38/180 (21%), Positives = 66/180 (36%), Gaps = 9/180 (5%)
Query: 361 MDRYKFEPQNIYNVDETGITTVQKPDRIIARRGARQVGSVTSAERGALVTXXXX-XXXXX 419
MD + P+ I+N D+ GI R +A G + V + + +
Sbjct: 195 MDISSYGPEMIFNADQCGIQKELFGARSLAYLGEKSVERIVQSLSSLTHSFTFLPMIFMN 254
Query: 420 XXXPPFFVFPRVRYQDHFVRDGPIGSAGS----ANPSGWMQDESFMHFLDHFRKHTNASP 475
P HF PI + A S M + +L + H
Sbjct: 255 GTLGPKAYMKIAEPTGHFPPSRPIPVCSNLEVHAGKSHIMTKDDMRVWLRNCVAHQQCP- 313
Query: 476 SRKILLVLDNHSSHIHINALDFCKTNGI--VMLSFPPHCSHKLQPLDRSVFGPLKKAVNS 533
+K+L+++D+ +S + C NG+ + + PP + +QPLD GP K + +
Sbjct: 314 -KKMLMIVDSWTSFKDHATIQSCMQNGVDLTIRNIPPGTTSLIQPLDVHFNGPWKTLIKN 372
>Z54216-7|CAB76416.2| 319|Caenorhabditis elegans Hypothetical
protein T24H10.7a protein.
Length = 319
Score = 31.9 bits (69), Expect = 3.0
Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 720 SPEVIRPLPKAPPRKLTNRGRKTRKSTIYTDTPEKE 755
SPEV+ PKAP R+ N +K R+ + D EKE
Sbjct: 17 SPEVVLKAPKAPTRRRKN-SKKDRRQDMEVDDGEKE 51
>Z35602-1|CAA84669.1| 1469|Caenorhabditis elegans Hypothetical
protein R13G10.1 protein.
Length = 1469
Score = 31.1 bits (67), Expect = 5.2
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 29 NQQSCSVTTPKGVTFDVRQPPQNRYESWSDGCGVRVRNIIKEDEGRWRL 77
N +SCSVT + D+ ++YE +D C R I +E+ ++R+
Sbjct: 160 NYESCSVTIMFQMVKDMPVENYDKYEVLTDNCVCITRTINRENNSKYRI 208
>L35274-1|AAA62647.1| 1469|Caenorhabditis elegans chromosome
condensation protein protein.
Length = 1469
Score = 31.1 bits (67), Expect = 5.2
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 29 NQQSCSVTTPKGVTFDVRQPPQNRYESWSDGCGVRVRNIIKEDEGRWRL 77
N +SCSVT + D+ ++YE +D C R I +E+ ++R+
Sbjct: 160 NYESCSVTIMFQMVKDMPVENYDKYEVLTDNCVCITRTINRENNSKYRI 208
>AL031630-14|CAA20993.1| 185|Caenorhabditis elegans Hypothetical
protein Y38H6C.15 protein.
Length = 185
Score = 31.1 bits (67), Expect = 5.2
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Query: 725 RPLPKAPPRKLTNRGRKTRKSTIYT--DTPEKEEIRREYENRLKRTKAKQ 772
+P K KL+ + KT+K T + D PEK E E E ++ KAK+
Sbjct: 81 KPESKKSAEKLSKKSDKTKKKTTVSSEDKPEKPEKLTEEEKPKEKEKAKE 130
>AF016666-2|AAB66084.1| 207|Caenorhabditis elegans Hypothetical
protein B0281.5 protein.
Length = 207
Score = 31.1 bits (67), Expect = 5.2
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 621 PPTSPSILTLEPQEEMEELSNEALLVQQPTENMPQCSQVLDKEQENIIANPKLLIIL 677
P + +L L+ + E LSN A L Q PT+N C+ +E ++AN +I+
Sbjct: 71 PDSKKDMLELKKEAEYYLLSNLAKLCQPPTDNFKTCT---PEELMRVVANTDKKVIM 124
>Z70753-2|CAA94760.1| 275|Caenorhabditis elegans Hypothetical
protein F40F9.3 protein.
Length = 275
Score = 30.7 bits (66), Expect = 6.9
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 5/67 (7%)
Query: 715 TPSLFSPEVIRPLPKAPPRKLTNRGRKTRKSTIYTDTPEKEEIRREYE---NRLKRTKAK 771
+PS S P+P A + +G RK+ I D + IR + E N+LK+ + K
Sbjct: 194 SPSCESAAAPNPVPSAMTKNKEGKGE--RKACILEDGHKSVMIRMDNEENRNKLKKVEPK 251
Query: 772 QVKKRLD 778
+ +RLD
Sbjct: 252 EPPRRLD 258
>AF134186-1|AAD55361.1| 1359|Caenorhabditis elegans XNP-1 protein.
Length = 1359
Score = 30.7 bits (66), Expect = 6.9
Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Query: 732 PRKLTNRGRKTRKSTIYTDTPEKEEIRREYENRLK---RTKAKQVKKR 776
PRK + + RK KS +D ++EE R++ +++ K + K K KKR
Sbjct: 75 PRKSSKKSRKRAKSESESDESDEEEDRKKSKSKKKVDQKKKEKSKKKR 122
>AF002197-2|AAB53983.2| 486|Caenorhabditis elegans Hypothetical
protein F20H11.1 protein.
Length = 486
Score = 30.7 bits (66), Expect = 6.9
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Query: 808 CVVCMSAYSESRPREKWIQCTVCKMWAHEECTQVESLDTGYVQDTNAK 855
C VCM ++ R + W +C VC M AH++C + V T AK
Sbjct: 176 CEVCM--HTIWRLVQWWRRCRVCGMRAHDKCAEEVKRVCAGVLSTRAK 221
>AF000196-11|AAC24256.1| 1359|Caenorhabditis elegans Human xnp gene
related protein 1 protein.
Length = 1359
Score = 30.7 bits (66), Expect = 6.9
Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Query: 732 PRKLTNRGRKTRKSTIYTDTPEKEEIRREYENRLK---RTKAKQVKKR 776
PRK + + RK KS +D ++EE R++ +++ K + K K KKR
Sbjct: 75 PRKSSKKSRKRAKSESESDESDEEEDRKKSKSKKKVDQKKKEKSKKKR 122
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.318 0.133 0.403
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,018,114
Number of Sequences: 27539
Number of extensions: 1351403
Number of successful extensions: 4183
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 4164
Number of HSP's gapped (non-prelim): 31
length of query: 1260
length of database: 12,573,161
effective HSP length: 90
effective length of query: 1170
effective length of database: 10,094,651
effective search space: 11810741670
effective search space used: 11810741670
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 65 (30.3 bits)
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