BLASTP 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BGIBMGA000980-TA|BGIBMGA000980-PA|IPR007303|TIP41-like protein (131 letters) Database: human 224,733 sequences; 73,234,838 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AL049670-1|CAB41244.1| 272|Homo sapiens hypothetical protein pr... 109 2e-24 AL021397-3|CAA16171.1| 272|Homo sapiens TIP41, TOR signalling p... 109 2e-24 AB097034-1|BAC77387.1| 272|Homo sapiens putative MAPK activatin... 109 2e-24 BC009506-1|AAH09506.1| 178|Homo sapiens TIP41, TOR signalling p... 108 5e-24 AL021397-4|CAI22473.1| 178|Homo sapiens TIP41, TOR signalling p... 108 5e-24 X61972-1|CAA43964.1| 221|Homo sapiens macropain subunit iota pr... 29 6.3 X59417-1|CAA42052.1| 246|Homo sapiens prosomal P27K protein pro... 29 6.3 CR456944-1|CAG33225.1| 246|Homo sapiens PSMA6 protein. 29 6.3 BC070137-1|AAH70137.1| 246|Homo sapiens proteasome (prosome, ma... 29 6.3 BC023659-1|AAH23659.1| 246|Homo sapiens proteasome (prosome, ma... 29 6.3 BC022354-1|AAH22354.1| 246|Homo sapiens proteasome (prosome, ma... 29 6.3 BC017882-1|AAH17882.1| 246|Homo sapiens proteasome (prosome, ma... 29 6.3 BC002979-1|AAH02979.1| 246|Homo sapiens proteasome (prosome, ma... 29 6.3 >AL049670-1|CAB41244.1| 272|Homo sapiens hypothetical protein protein. Length = 272 Score = 109 bits (263), Expect = 2e-24 Identities = 60/132 (45%), Positives = 80/132 (60%), Gaps = 6/132 (4%) Query: 1 MVFPKNRLTLAHKSGASINFNPLDALKRVASTVEPVEVSCSEVWMQARPYAEKLK---KS 57 M+F N L + H SG I FN DAL+ V + ++V+C+E W ++R E K K Sbjct: 48 MMFGDNVLRIQHGSGFGIEFNATDALRCVNNYQGMLKVACAEEWQESRTEGEHSKEVIKP 107 Query: 58 FDWTFCTDYKGSI---SDNITVWETEESIDFELLKQKNQILFYHDLTLFEDELHDHGVSK 114 +DWT+ TDYKG++ S + V T + ID E LK + QI F+ ++ LFEDELHDHGVS Sbjct: 108 YDWTYTTDYKGTLLGESLKLKVVPTTDHIDTEKLKAREQIKFFEEVLLFEDELHDHGVSS 167 Query: 115 LSVKIVSTPLIF 126 LSVKI P F Sbjct: 168 LSVKIRVMPSSF 179 >AL021397-3|CAA16171.1| 272|Homo sapiens TIP41, TOR signalling pathway regulator-like (S. cerevisiae) protein. Length = 272 Score = 109 bits (263), Expect = 2e-24 Identities = 60/132 (45%), Positives = 80/132 (60%), Gaps = 6/132 (4%) Query: 1 MVFPKNRLTLAHKSGASINFNPLDALKRVASTVEPVEVSCSEVWMQARPYAEKLK---KS 57 M+F N L + H SG I FN DAL+ V + ++V+C+E W ++R E K K Sbjct: 48 MMFGDNVLRIQHGSGFGIEFNATDALRCVNNYQGMLKVACAEEWQESRTEGEHSKEVIKP 107 Query: 58 FDWTFCTDYKGSI---SDNITVWETEESIDFELLKQKNQILFYHDLTLFEDELHDHGVSK 114 +DWT+ TDYKG++ S + V T + ID E LK + QI F+ ++ LFEDELHDHGVS Sbjct: 108 YDWTYTTDYKGTLLGESLKLKVVPTTDHIDTEKLKAREQIKFFEEVLLFEDELHDHGVSS 167 Query: 115 LSVKIVSTPLIF 126 LSVKI P F Sbjct: 168 LSVKIRVMPSSF 179 >AB097034-1|BAC77387.1| 272|Homo sapiens putative MAPK activating protein protein. Length = 272 Score = 109 bits (263), Expect = 2e-24 Identities = 60/132 (45%), Positives = 80/132 (60%), Gaps = 6/132 (4%) Query: 1 MVFPKNRLTLAHKSGASINFNPLDALKRVASTVEPVEVSCSEVWMQARPYAEKLK---KS 57 M+F N L + H SG I FN DAL+ V + ++V+C+E W ++R E K K Sbjct: 48 MMFGDNVLRIQHGSGFGIEFNATDALRCVNNYQGMLKVACAEEWQESRTEGEHSKEVIKP 107 Query: 58 FDWTFCTDYKGSI---SDNITVWETEESIDFELLKQKNQILFYHDLTLFEDELHDHGVSK 114 +DWT+ TDYKG++ S + V T + ID E LK + QI F+ ++ LFEDELHDHGVS Sbjct: 108 YDWTYTTDYKGTLLGESLKLKVVPTTDHIDTEKLKAREQIKFFEEVLLFEDELHDHGVSS 167 Query: 115 LSVKIVSTPLIF 126 LSVKI P F Sbjct: 168 LSVKIRVMPSSF 179 >BC009506-1|AAH09506.1| 178|Homo sapiens TIP41, TOR signalling pathway regulator-like (S. cerevisiae) protein. Length = 178 Score = 108 bits (260), Expect = 5e-24 Identities = 58/125 (46%), Positives = 78/125 (62%), Gaps = 6/125 (4%) Query: 1 MVFPKNRLTLAHKSGASINFNPLDALKRVASTVEPVEVSCSEVWMQARPYAEKLK---KS 57 M+F N L + H SG I FN DAL+ V + ++V+C+E W ++R E K K Sbjct: 48 MMFGDNVLRIQHGSGFGIEFNATDALRCVNNYQGMLKVACAEEWQESRTEGEHSKEVIKP 107 Query: 58 FDWTFCTDYKGSI---SDNITVWETEESIDFELLKQKNQILFYHDLTLFEDELHDHGVSK 114 +DWT+ TDYKG++ S + V T + ID E LK + QI F+ ++ LFEDELHDHGVS Sbjct: 108 YDWTYTTDYKGTLLGESLKLKVVPTTDHIDTEKLKAREQIKFFEEVLLFEDELHDHGVSS 167 Query: 115 LSVKI 119 LSVKI Sbjct: 168 LSVKI 172 >AL021397-4|CAI22473.1| 178|Homo sapiens TIP41, TOR signalling pathway regulator-like (S. cerevisiae) protein. Length = 178 Score = 108 bits (260), Expect = 5e-24 Identities = 58/125 (46%), Positives = 78/125 (62%), Gaps = 6/125 (4%) Query: 1 MVFPKNRLTLAHKSGASINFNPLDALKRVASTVEPVEVSCSEVWMQARPYAEKLK---KS 57 M+F N L + H SG I FN DAL+ V + ++V+C+E W ++R E K K Sbjct: 48 MMFGDNVLRIQHGSGFGIEFNATDALRCVNNYQGMLKVACAEEWQESRTEGEHSKEVIKP 107 Query: 58 FDWTFCTDYKGSI---SDNITVWETEESIDFELLKQKNQILFYHDLTLFEDELHDHGVSK 114 +DWT+ TDYKG++ S + V T + ID E LK + QI F+ ++ LFEDELHDHGVS Sbjct: 108 YDWTYTTDYKGTLLGESLKLKVVPTTDHIDTEKLKAREQIKFFEEVLLFEDELHDHGVSS 167 Query: 115 LSVKI 119 LSVKI Sbjct: 168 LSVKI 172 >X61972-1|CAA43964.1| 221|Homo sapiens macropain subunit iota protein. Length = 221 Score = 28.7 bits (61), Expect = 6.3 Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 4/35 (11%) Query: 52 EKLKKSFDWTFCTDYKGSISDNITVWETEESIDFE 86 +K+KK FDWTF + ++ IT T SIDF+ Sbjct: 156 KKVKKKFDWTF----EQTVETAITCLSTVLSIDFK 186 >X59417-1|CAA42052.1| 246|Homo sapiens prosomal P27K protein protein. Length = 246 Score = 28.7 bits (61), Expect = 6.3 Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 4/35 (11%) Query: 52 EKLKKSFDWTFCTDYKGSISDNITVWETEESIDFE 86 +K+KK FDWTF + ++ IT T SIDF+ Sbjct: 181 KKVKKKFDWTF----EQTVETAITCLSTVLSIDFK 211 >CR456944-1|CAG33225.1| 246|Homo sapiens PSMA6 protein. Length = 246 Score = 28.7 bits (61), Expect = 6.3 Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 4/35 (11%) Query: 52 EKLKKSFDWTFCTDYKGSISDNITVWETEESIDFE 86 +K+KK FDWTF + ++ IT T SIDF+ Sbjct: 181 KKVKKKFDWTF----EQTVETAITCLSTVLSIDFK 211 >BC070137-1|AAH70137.1| 246|Homo sapiens proteasome (prosome, macropain) subunit, alpha type, 6 protein. Length = 246 Score = 28.7 bits (61), Expect = 6.3 Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 4/35 (11%) Query: 52 EKLKKSFDWTFCTDYKGSISDNITVWETEESIDFE 86 +K+KK FDWTF + ++ IT T SIDF+ Sbjct: 181 KKVKKKFDWTF----EQTVETAITCLSTVLSIDFK 211 >BC023659-1|AAH23659.1| 246|Homo sapiens proteasome (prosome, macropain) subunit, alpha type, 6 protein. Length = 246 Score = 28.7 bits (61), Expect = 6.3 Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 4/35 (11%) Query: 52 EKLKKSFDWTFCTDYKGSISDNITVWETEESIDFE 86 +K+KK FDWTF + ++ IT T SIDF+ Sbjct: 181 KKVKKKFDWTF----EQTVETAITCLSTVLSIDFK 211 >BC022354-1|AAH22354.1| 246|Homo sapiens proteasome (prosome, macropain) subunit, alpha type, 6 protein. Length = 246 Score = 28.7 bits (61), Expect = 6.3 Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 4/35 (11%) Query: 52 EKLKKSFDWTFCTDYKGSISDNITVWETEESIDFE 86 +K+KK FDWTF + ++ IT T SIDF+ Sbjct: 181 KKVKKKFDWTF----EQTVETAITCLSTVLSIDFK 211 >BC017882-1|AAH17882.1| 246|Homo sapiens proteasome (prosome, macropain) subunit, alpha type, 6 protein. Length = 246 Score = 28.7 bits (61), Expect = 6.3 Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 4/35 (11%) Query: 52 EKLKKSFDWTFCTDYKGSISDNITVWETEESIDFE 86 +K+KK FDWTF + ++ IT T SIDF+ Sbjct: 181 KKVKKKFDWTF----EQTVETAITCLSTVLSIDFK 211 >BC002979-1|AAH02979.1| 246|Homo sapiens proteasome (prosome, macropain) subunit, alpha type, 6 protein. Length = 246 Score = 28.7 bits (61), Expect = 6.3 Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 4/35 (11%) Query: 52 EKLKKSFDWTFCTDYKGSISDNITVWETEESIDFE 86 +K+KK FDWTF + ++ IT T SIDF+ Sbjct: 181 KKVKKKFDWTF----EQTVETAITCLSTVLSIDFK 211 Database: human Posted date: Oct 5, 2007 11:13 AM Number of letters in database: 73,234,838 Number of sequences in database: 224,733 Lambda K H 0.319 0.133 0.400 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 18,610,483 Number of Sequences: 224733 Number of extensions: 654320 Number of successful extensions: 1288 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 5 Number of HSP's successfully gapped in prelim test: 8 Number of HSP's that attempted gapping in prelim test: 1273 Number of HSP's gapped (non-prelim): 13 length of query: 131 length of database: 73,234,838 effective HSP length: 82 effective length of query: 49 effective length of database: 54,806,732 effective search space: 2685529868 effective search space used: 2685529868 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.8 bits) S2: 60 (28.3 bits)
- SilkBase 1999-2023 -