GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000980-TA|BGIBMGA000980-PA|IPR007303|TIP41-like protein
         (131 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    21   2.8  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    21   2.8  
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    21   2.8  
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    21   2.8  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    21   4.9  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    20   6.5  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    20   6.5  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    20   8.6  

>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 2.8
 Identities = 9/30 (30%), Positives = 18/30 (60%)

Query: 68  GSISDNITVWETEESIDFELLKQKNQILFY 97
           G   D+IT++    S++F  L  +++ LF+
Sbjct: 187 GGTPDSITLFGDGTSVNFHYLSPQSRGLFH 216


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 2.8
 Identities = 9/30 (30%), Positives = 18/30 (60%)

Query: 68  GSISDNITVWETEESIDFELLKQKNQILFY 97
           G   D+IT++    S++F  L  +++ LF+
Sbjct: 187 GGTPDSITLFGDGTSVNFHYLSPQSRGLFH 216


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 2.8
 Identities = 9/30 (30%), Positives = 18/30 (60%)

Query: 68  GSISDNITVWETEESIDFELLKQKNQILFY 97
           G   D+IT++    S++F  L  +++ LF+
Sbjct: 187 GGTPDSITLFGDGTSVNFHYLSPQSRGLFH 216


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 2.8
 Identities = 9/30 (30%), Positives = 18/30 (60%)

Query: 68  GSISDNITVWETEESIDFELLKQKNQILFY 97
           G   D+IT++    S++F  L  +++ LF+
Sbjct: 187 GGTPDSITLFGDGTSVNFHYLSPQSRGLFH 216


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 20.6 bits (41), Expect = 4.9
 Identities = 8/27 (29%), Positives = 16/27 (59%)

Query: 70  ISDNITVWETEESIDFELLKQKNQILF 96
           +++ +T W   E I ++L K+K  + F
Sbjct: 155 LANVVTDWVNFERIYYKLTKKKLSVFF 181


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 20.2 bits (40), Expect = 6.5
 Identities = 8/42 (19%), Positives = 21/42 (50%), Gaps = 1/42 (2%)

Query: 4    PKNRL-TLAHKSGASINFNPLDALKRVASTVEPVEVSCSEVW 44
            P  R+   A+K    ++F+  + +KR +  +  +++    +W
Sbjct: 1697 PNRRMGPYAYKGDQWVSFDDREMIKRKSEFIRKMDLGGGMIW 1738


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 20.2 bits (40), Expect = 6.5
 Identities = 8/15 (53%), Positives = 10/15 (66%)

Query: 57   SFDWTFCTDYKGSIS 71
            SFD TF T YK  ++
Sbjct: 1311 SFDDTFTTTYKEDVT 1325


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 19.8 bits (39), Expect = 8.6
 Identities = 9/30 (30%), Positives = 17/30 (56%)

Query: 68  GSISDNITVWETEESIDFELLKQKNQILFY 97
           G   D+IT++    S +F  L  +++ LF+
Sbjct: 187 GGTPDSITLFGDGTSANFHYLSPQSRGLFH 216


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.319    0.133    0.400 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,951
Number of Sequences: 317
Number of extensions: 1110
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of query: 131
length of database: 114,650
effective HSP length: 51
effective length of query: 80
effective length of database: 98,483
effective search space:  7878640
effective search space used:  7878640
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.9 bits)
S2: 39 (19.8 bits)