SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000980-TA|BGIBMGA000980-PA|IPR007303|TIP41-like protein
         (131 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL049670-1|CAB41244.1|  272|Homo sapiens hypothetical protein pr...   109   2e-24
AL021397-3|CAA16171.1|  272|Homo sapiens TIP41, TOR signalling p...   109   2e-24
AB097034-1|BAC77387.1|  272|Homo sapiens putative MAPK activatin...   109   2e-24
BC009506-1|AAH09506.1|  178|Homo sapiens TIP41, TOR signalling p...   108   5e-24
AL021397-4|CAI22473.1|  178|Homo sapiens TIP41, TOR signalling p...   108   5e-24
X61972-1|CAA43964.1|  221|Homo sapiens macropain subunit iota pr...    29   6.3  
X59417-1|CAA42052.1|  246|Homo sapiens prosomal P27K protein pro...    29   6.3  
CR456944-1|CAG33225.1|  246|Homo sapiens PSMA6 protein.                29   6.3  
BC070137-1|AAH70137.1|  246|Homo sapiens proteasome (prosome, ma...    29   6.3  
BC023659-1|AAH23659.1|  246|Homo sapiens proteasome (prosome, ma...    29   6.3  
BC022354-1|AAH22354.1|  246|Homo sapiens proteasome (prosome, ma...    29   6.3  
BC017882-1|AAH17882.1|  246|Homo sapiens proteasome (prosome, ma...    29   6.3  
BC002979-1|AAH02979.1|  246|Homo sapiens proteasome (prosome, ma...    29   6.3  

>AL049670-1|CAB41244.1|  272|Homo sapiens hypothetical protein
           protein.
          Length = 272

 Score =  109 bits (263), Expect = 2e-24
 Identities = 60/132 (45%), Positives = 80/132 (60%), Gaps = 6/132 (4%)

Query: 1   MVFPKNRLTLAHKSGASINFNPLDALKRVASTVEPVEVSCSEVWMQARPYAEKLK---KS 57
           M+F  N L + H SG  I FN  DAL+ V +    ++V+C+E W ++R   E  K   K 
Sbjct: 48  MMFGDNVLRIQHGSGFGIEFNATDALRCVNNYQGMLKVACAEEWQESRTEGEHSKEVIKP 107

Query: 58  FDWTFCTDYKGSI---SDNITVWETEESIDFELLKQKNQILFYHDLTLFEDELHDHGVSK 114
           +DWT+ TDYKG++   S  + V  T + ID E LK + QI F+ ++ LFEDELHDHGVS 
Sbjct: 108 YDWTYTTDYKGTLLGESLKLKVVPTTDHIDTEKLKAREQIKFFEEVLLFEDELHDHGVSS 167

Query: 115 LSVKIVSTPLIF 126
           LSVKI   P  F
Sbjct: 168 LSVKIRVMPSSF 179


>AL021397-3|CAA16171.1|  272|Homo sapiens TIP41, TOR signalling
           pathway regulator-like (S. cerevisiae) protein.
          Length = 272

 Score =  109 bits (263), Expect = 2e-24
 Identities = 60/132 (45%), Positives = 80/132 (60%), Gaps = 6/132 (4%)

Query: 1   MVFPKNRLTLAHKSGASINFNPLDALKRVASTVEPVEVSCSEVWMQARPYAEKLK---KS 57
           M+F  N L + H SG  I FN  DAL+ V +    ++V+C+E W ++R   E  K   K 
Sbjct: 48  MMFGDNVLRIQHGSGFGIEFNATDALRCVNNYQGMLKVACAEEWQESRTEGEHSKEVIKP 107

Query: 58  FDWTFCTDYKGSI---SDNITVWETEESIDFELLKQKNQILFYHDLTLFEDELHDHGVSK 114
           +DWT+ TDYKG++   S  + V  T + ID E LK + QI F+ ++ LFEDELHDHGVS 
Sbjct: 108 YDWTYTTDYKGTLLGESLKLKVVPTTDHIDTEKLKAREQIKFFEEVLLFEDELHDHGVSS 167

Query: 115 LSVKIVSTPLIF 126
           LSVKI   P  F
Sbjct: 168 LSVKIRVMPSSF 179


>AB097034-1|BAC77387.1|  272|Homo sapiens putative MAPK activating
           protein protein.
          Length = 272

 Score =  109 bits (263), Expect = 2e-24
 Identities = 60/132 (45%), Positives = 80/132 (60%), Gaps = 6/132 (4%)

Query: 1   MVFPKNRLTLAHKSGASINFNPLDALKRVASTVEPVEVSCSEVWMQARPYAEKLK---KS 57
           M+F  N L + H SG  I FN  DAL+ V +    ++V+C+E W ++R   E  K   K 
Sbjct: 48  MMFGDNVLRIQHGSGFGIEFNATDALRCVNNYQGMLKVACAEEWQESRTEGEHSKEVIKP 107

Query: 58  FDWTFCTDYKGSI---SDNITVWETEESIDFELLKQKNQILFYHDLTLFEDELHDHGVSK 114
           +DWT+ TDYKG++   S  + V  T + ID E LK + QI F+ ++ LFEDELHDHGVS 
Sbjct: 108 YDWTYTTDYKGTLLGESLKLKVVPTTDHIDTEKLKAREQIKFFEEVLLFEDELHDHGVSS 167

Query: 115 LSVKIVSTPLIF 126
           LSVKI   P  F
Sbjct: 168 LSVKIRVMPSSF 179


>BC009506-1|AAH09506.1|  178|Homo sapiens TIP41, TOR signalling
           pathway regulator-like (S. cerevisiae) protein.
          Length = 178

 Score =  108 bits (260), Expect = 5e-24
 Identities = 58/125 (46%), Positives = 78/125 (62%), Gaps = 6/125 (4%)

Query: 1   MVFPKNRLTLAHKSGASINFNPLDALKRVASTVEPVEVSCSEVWMQARPYAEKLK---KS 57
           M+F  N L + H SG  I FN  DAL+ V +    ++V+C+E W ++R   E  K   K 
Sbjct: 48  MMFGDNVLRIQHGSGFGIEFNATDALRCVNNYQGMLKVACAEEWQESRTEGEHSKEVIKP 107

Query: 58  FDWTFCTDYKGSI---SDNITVWETEESIDFELLKQKNQILFYHDLTLFEDELHDHGVSK 114
           +DWT+ TDYKG++   S  + V  T + ID E LK + QI F+ ++ LFEDELHDHGVS 
Sbjct: 108 YDWTYTTDYKGTLLGESLKLKVVPTTDHIDTEKLKAREQIKFFEEVLLFEDELHDHGVSS 167

Query: 115 LSVKI 119
           LSVKI
Sbjct: 168 LSVKI 172


>AL021397-4|CAI22473.1|  178|Homo sapiens TIP41, TOR signalling
           pathway regulator-like (S. cerevisiae) protein.
          Length = 178

 Score =  108 bits (260), Expect = 5e-24
 Identities = 58/125 (46%), Positives = 78/125 (62%), Gaps = 6/125 (4%)

Query: 1   MVFPKNRLTLAHKSGASINFNPLDALKRVASTVEPVEVSCSEVWMQARPYAEKLK---KS 57
           M+F  N L + H SG  I FN  DAL+ V +    ++V+C+E W ++R   E  K   K 
Sbjct: 48  MMFGDNVLRIQHGSGFGIEFNATDALRCVNNYQGMLKVACAEEWQESRTEGEHSKEVIKP 107

Query: 58  FDWTFCTDYKGSI---SDNITVWETEESIDFELLKQKNQILFYHDLTLFEDELHDHGVSK 114
           +DWT+ TDYKG++   S  + V  T + ID E LK + QI F+ ++ LFEDELHDHGVS 
Sbjct: 108 YDWTYTTDYKGTLLGESLKLKVVPTTDHIDTEKLKAREQIKFFEEVLLFEDELHDHGVSS 167

Query: 115 LSVKI 119
           LSVKI
Sbjct: 168 LSVKI 172


>X61972-1|CAA43964.1|  221|Homo sapiens macropain subunit iota
           protein.
          Length = 221

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 4/35 (11%)

Query: 52  EKLKKSFDWTFCTDYKGSISDNITVWETEESIDFE 86
           +K+KK FDWTF    + ++   IT   T  SIDF+
Sbjct: 156 KKVKKKFDWTF----EQTVETAITCLSTVLSIDFK 186


>X59417-1|CAA42052.1|  246|Homo sapiens prosomal P27K protein
           protein.
          Length = 246

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 4/35 (11%)

Query: 52  EKLKKSFDWTFCTDYKGSISDNITVWETEESIDFE 86
           +K+KK FDWTF    + ++   IT   T  SIDF+
Sbjct: 181 KKVKKKFDWTF----EQTVETAITCLSTVLSIDFK 211


>CR456944-1|CAG33225.1|  246|Homo sapiens PSMA6 protein.
          Length = 246

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 4/35 (11%)

Query: 52  EKLKKSFDWTFCTDYKGSISDNITVWETEESIDFE 86
           +K+KK FDWTF    + ++   IT   T  SIDF+
Sbjct: 181 KKVKKKFDWTF----EQTVETAITCLSTVLSIDFK 211


>BC070137-1|AAH70137.1|  246|Homo sapiens proteasome (prosome,
           macropain) subunit, alpha type, 6 protein.
          Length = 246

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 4/35 (11%)

Query: 52  EKLKKSFDWTFCTDYKGSISDNITVWETEESIDFE 86
           +K+KK FDWTF    + ++   IT   T  SIDF+
Sbjct: 181 KKVKKKFDWTF----EQTVETAITCLSTVLSIDFK 211


>BC023659-1|AAH23659.1|  246|Homo sapiens proteasome (prosome,
           macropain) subunit, alpha type, 6 protein.
          Length = 246

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 4/35 (11%)

Query: 52  EKLKKSFDWTFCTDYKGSISDNITVWETEESIDFE 86
           +K+KK FDWTF    + ++   IT   T  SIDF+
Sbjct: 181 KKVKKKFDWTF----EQTVETAITCLSTVLSIDFK 211


>BC022354-1|AAH22354.1|  246|Homo sapiens proteasome (prosome,
           macropain) subunit, alpha type, 6 protein.
          Length = 246

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 4/35 (11%)

Query: 52  EKLKKSFDWTFCTDYKGSISDNITVWETEESIDFE 86
           +K+KK FDWTF    + ++   IT   T  SIDF+
Sbjct: 181 KKVKKKFDWTF----EQTVETAITCLSTVLSIDFK 211


>BC017882-1|AAH17882.1|  246|Homo sapiens proteasome (prosome,
           macropain) subunit, alpha type, 6 protein.
          Length = 246

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 4/35 (11%)

Query: 52  EKLKKSFDWTFCTDYKGSISDNITVWETEESIDFE 86
           +K+KK FDWTF    + ++   IT   T  SIDF+
Sbjct: 181 KKVKKKFDWTF----EQTVETAITCLSTVLSIDFK 211


>BC002979-1|AAH02979.1|  246|Homo sapiens proteasome (prosome,
           macropain) subunit, alpha type, 6 protein.
          Length = 246

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 4/35 (11%)

Query: 52  EKLKKSFDWTFCTDYKGSISDNITVWETEESIDFE 86
           +K+KK FDWTF    + ++   IT   T  SIDF+
Sbjct: 181 KKVKKKFDWTF----EQTVETAITCLSTVLSIDFK 211


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.319    0.133    0.400 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,610,483
Number of Sequences: 224733
Number of extensions: 654320
Number of successful extensions: 1288
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 1273
Number of HSP's gapped (non-prelim): 13
length of query: 131
length of database: 73,234,838
effective HSP length: 82
effective length of query: 49
effective length of database: 54,806,732
effective search space: 2685529868
effective search space used: 2685529868
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 60 (28.3 bits)

- SilkBase 1999-2023 -