Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000980-TA|BGIBMGA000980-PA|IPR007303|TIP41-like protein
(131 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L16621-1|ABD63204.1| 281|Caenorhabditis elegans Hypothetical pr... 100 7e-22
AF038618-3|AAB92073.1| 572|Caenorhabditis elegans Hypothetical ... 28 2.5
Z83239-6|CAB05803.1| 324|Caenorhabditis elegans Hypothetical pr... 27 5.7
Z46794-3|CAA86783.1| 429|Caenorhabditis elegans Hypothetical pr... 27 5.7
Z82274-4|CAB05228.1| 429|Caenorhabditis elegans Hypothetical pr... 26 7.5
Z82274-3|CAB05229.1| 435|Caenorhabditis elegans Hypothetical pr... 26 7.5
Z72506-2|CAA96621.1| 434|Caenorhabditis elegans Hypothetical pr... 26 10.0
Z72506-1|CAA96618.1| 432|Caenorhabditis elegans Hypothetical pr... 26 10.0
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 26 10.0
>L16621-1|ABD63204.1| 281|Caenorhabditis elegans Hypothetical
protein ZK688.9 protein.
Length = 281
Score = 99.5 bits (237), Expect = 7e-22
Identities = 55/124 (44%), Positives = 75/124 (60%), Gaps = 6/124 (4%)
Query: 1 MVFPKNRLTLAHKSGASINFNPLDALKRV-ASTVEPVEVSCSEVWMQARP----YAEKLK 55
MVF +N LT+ SI FN LDALK V A + V+V S VW AR + +
Sbjct: 71 MVFARNSLTIQFGRLGSIEFNALDALKMVCADRLPDVKVGASTVWQSARQDRIQQISEHQ 130
Query: 56 KSFDWTFCTDYKGSISDNITVWETEESIDFELLKQKNQILFYHDLTLFEDELHDHGVSKL 115
K FDWT+ T YKG+++ V T E ID E LK++++ILF +TLFEDEL DHG+++L
Sbjct: 131 KPFDWTYTTHYKGTVT-GCQVTPTTERIDMERLKRRDEILFSSSITLFEDELADHGIAQL 189
Query: 116 SVKI 119
++
Sbjct: 190 LARV 193
>AF038618-3|AAB92073.1| 572|Caenorhabditis elegans Hypothetical
protein F42G8.7 protein.
Length = 572
Score = 27.9 bits (59), Expect = 2.5
Identities = 15/55 (27%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Query: 49 PYAEKLKKSFDWTFCTDYKGSISDNITVWETEESIDFELLKQKNQILFYHDLTLF 103
P++ KL SF DY+ D TVW + + + L K I + + +F
Sbjct: 27 PFSRKLMSSFSQA-AADYQAKYPDRKTVWGNVDCMAEDYLMNKYSITKFPTMKVF 80
>Z83239-6|CAB05803.1| 324|Caenorhabditis elegans Hypothetical
protein T09F5.10 protein.
Length = 324
Score = 26.6 bits (56), Expect = 5.7
Identities = 19/81 (23%), Positives = 35/81 (43%), Gaps = 4/81 (4%)
Query: 21 NPLDALKRVASTVEPVEVSCSEVWMQARPYAEKLKKSFDWTF----CTDYKGSISDNITV 76
NP A AS ++ ++ SC+E+ +++ + F W C + I + +
Sbjct: 242 NPRVAQAMFASMLKDIKASCTEIAHYEMRSSQQSQDCFRWIAPFLKCKPSRVHIHNLLYK 301
Query: 77 WETEESIDFELLKQKNQILFY 97
E E IDF + +QI +
Sbjct: 302 HEVPEGIDFTKVYSPSQIQMF 322
>Z46794-3|CAA86783.1| 429|Caenorhabditis elegans Hypothetical
protein R06F6.4 protein.
Length = 429
Score = 26.6 bits (56), Expect = 5.7
Identities = 10/18 (55%), Positives = 13/18 (72%)
Query: 100 LTLFEDELHDHGVSKLSV 117
L LF+D LHDH V ++ V
Sbjct: 317 LDLFQDTLHDHNVHRIPV 334
>Z82274-4|CAB05228.1| 429|Caenorhabditis elegans Hypothetical
protein JC8.6b protein.
Length = 429
Score = 26.2 bits (55), Expect = 7.5
Identities = 23/101 (22%), Positives = 45/101 (44%), Gaps = 12/101 (11%)
Query: 7 RLTLAHKSGASI-NFNPLDALKRVASTVEPVEVSCS-----------EVWMQARPYAEKL 54
R+T SG ++ N N L +L +ST P S ++ + +P E
Sbjct: 284 RMTRYKNSGGAVSNTNALMSLTNASSTATPDSGPGSVVTDEHGDDYEDMLLSHKPKVEMD 343
Query: 55 KKSFDWTFCTDYKGSISDNITVWETEESIDFELLKQKNQIL 95
+ F W + TD + V + EE++++E ++ +++ L
Sbjct: 344 PRRFPWYYMTDEVVEAATMCMVAQAEEALNYEKVQTEDEKL 384
>Z82274-3|CAB05229.1| 435|Caenorhabditis elegans Hypothetical
protein JC8.6a protein.
Length = 435
Score = 26.2 bits (55), Expect = 7.5
Identities = 23/101 (22%), Positives = 45/101 (44%), Gaps = 12/101 (11%)
Query: 7 RLTLAHKSGASI-NFNPLDALKRVASTVEPVEVSCS-----------EVWMQARPYAEKL 54
R+T SG ++ N N L +L +ST P S ++ + +P E
Sbjct: 290 RMTRYKNSGGAVSNTNALMSLTNASSTATPDSGPGSVVTDEHGDDYEDMLLSHKPKVEMD 349
Query: 55 KKSFDWTFCTDYKGSISDNITVWETEESIDFELLKQKNQIL 95
+ F W + TD + V + EE++++E ++ +++ L
Sbjct: 350 PRRFPWYYMTDEVVEAATMCMVAQAEEALNYEKVQTEDEKL 390
>Z72506-2|CAA96621.1| 434|Caenorhabditis elegans Hypothetical
protein F07A5.1b protein.
Length = 434
Score = 25.8 bits (54), Expect = 10.0
Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 50 YAEKLKKSFDWTFCTDYKGSISDNITVWETEESID 84
Y +KL D F DY G I+ T +T+E +D
Sbjct: 127 YMQKLIY-IDMAFIVDYSGKINSEKTFEKTKEKVD 160
>Z72506-1|CAA96618.1| 432|Caenorhabditis elegans Hypothetical
protein F07A5.1a protein.
Length = 432
Score = 25.8 bits (54), Expect = 10.0
Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 50 YAEKLKKSFDWTFCTDYKGSISDNITVWETEESID 84
Y +KL D F DY G I+ T +T+E +D
Sbjct: 127 YMQKLIY-IDMAFIVDYSGKINSEKTFEKTKEKVD 160
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 25.8 bits (54), Expect = 10.0
Identities = 13/51 (25%), Positives = 23/51 (45%)
Query: 9 TLAHKSGASINFNPLDALKRVASTVEPVEVSCSEVWMQARPYAEKLKKSFD 59
T + ++NF VAS+ +E S + + A PY+ K+ F+
Sbjct: 1624 TGGNSGSTTVNFQSSSVASTVASSTANIESSTTPIPTCASPYSGKIATVFE 1674
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.319 0.133 0.400
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,285,791
Number of Sequences: 27539
Number of extensions: 123103
Number of successful extensions: 313
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 308
Number of HSP's gapped (non-prelim): 9
length of query: 131
length of database: 12,573,161
effective HSP length: 74
effective length of query: 57
effective length of database: 10,535,275
effective search space: 600510675
effective search space used: 600510675
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 54 (25.8 bits)
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