Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000979-TA|BGIBMGA000979-PA|IPR007259|Spc97/Spc98
(694 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g17410.2 68418.m02043 tubulin family protein similar to spind... 322 5e-88
At5g17410.1 68418.m02042 tubulin family protein similar to spind... 322 5e-88
At5g06680.1 68418.m00754 tubulin family protein similar to SP|Q9... 88 2e-17
At3g53760.1 68416.m05939 tubulin family protein similar to SP|Q9... 46 8e-05
At3g43610.1 68416.m04640 tubulin family protein 43 6e-04
At1g20570.1 68414.m02565 tubulin family protein 43 6e-04
At1g80260.1 68414.m09396 tubulin family protein 40 0.004
At3g32190.1 68416.m04102 hypothetical protein 32 1.1
At3g49400.1 68416.m05400 transducin family protein / WD-40 repea... 32 1.5
At5g03640.1 68418.m00323 protein kinase family protein contains ... 30 4.5
At5g16160.1 68418.m01889 expressed protein 30 5.9
At5g44310.2 68418.m05424 late embryogenesis abundant domain-cont... 29 7.9
At5g44310.1 68418.m05423 late embryogenesis abundant domain-cont... 29 7.9
At4g20260.2 68417.m02960 DREPP plasma membrane polypeptide famil... 29 7.9
At4g20260.1 68417.m02959 DREPP plasma membrane polypeptide famil... 29 7.9
At3g22760.1 68416.m02870 CXC domain containing TSO1-like protein... 29 7.9
At3g07190.1 68416.m00857 expressed protein 29 7.9
>At5g17410.2 68418.m02043 tubulin family protein similar to spindle
pole body protein [Homo
sapiens][GI:2801701][PMID:9566967], gamma-tubulin ring
protein Dgrip84 [Drosophila
melanogaster][GI:4689225][PMID: 10037793]
Length = 679
Score = 322 bits (791), Expect = 5e-88
Identities = 170/496 (34%), Positives = 273/496 (55%), Gaps = 11/496 (2%)
Query: 187 QENILIDELLYIFYGVPGNYIVHQPVKDTYDARTFLISEDVDDALKQIVQQMLPLASNYS 246
QE I+ID+LL G+ G YI + D+ F + +D AL+++ +++ PL Y
Sbjct: 64 QELIVIDDLLSALVGIEGRYISIKRFHGKEDSIAFQVDPSMDLALQELAKRIFPLCEYYL 123
Query: 247 IVRRFIEHCNMW-SGQVLHALVAAIEILLKDYYTMIAQLETEHMTGSLSLQKLWYFVLPT 305
++ +F+E + + +G V HA AA+ LL DY M+AQLE + G LS+Q LW++ P
Sbjct: 124 LIDQFVESSSQFKNGLVNHAFAAALRALLLDYQAMVAQLEHQFRLGRLSIQGLWFYCQPM 183
Query: 306 MHTMQVLAAIVTKIGKSELRGGAVLTVLHDKTNTLMGDARAQEISLFLTERACRPYLNVL 365
M +M+ LAA++ + + G VL +L + + GD + + +TE A YL++L
Sbjct: 184 MGSMRALAAVIQQASTKQFVGSGVLNLLQSQAKAMAGDNSVRSLLEKMTECASNAYLSIL 243
Query: 366 DQWIHKGTIVDPFQEFMIEDNELINKEELPVDYSADYWEKRYCIQSDRVPKFLDKFTDII 425
++W+++G I DP+ EF I +N + KE L D +A YW +RY ++ D +P FL I
Sbjct: 244 ERWVYEGIIDDPYGEFFIAENRSLKKESLSQDSTAKYWSQRYSLK-DTIPGFLANIAATI 302
Query: 426 LRTGKYLNVISQCGKSISKTNTDEIKYSLREQN--YGAIIQKAYAFAXXXXXXXXXXXYD 483
L TGKYLNV+ +CG ++ ++ K ++ N Y I+ A+ FA YD
Sbjct: 303 LTTGKYLNVMRECGHNVQVPISERSKLTIFGSNHHYLECIKAAHEFASIELVNLIKDKYD 362
Query: 484 LMGRLKSVKNYFLMSQGDFIVQFMDATDQELSKKIDDIIPXXXXXXXXXXXXXXXXXHDP 543
L+GRL+S+K+Y L+ QGDF+V FMD +EL+KK+ +I DP
Sbjct: 363 LVGRLRSIKHYLLLDQGDFLVHFMDIAREELNKKVHEISVEKLQSLLDLALRTTAAAADP 422
Query: 544 YNEDMRVELLPYDLQFQMFKILSIXXXXXXXYKHNKDCPPLTGIETFSFGMEVKWPVSLV 603
+ED+ + L + ++ +D +TG+ETFS +V+WP+S+V
Sbjct: 423 RHEDLTCCVDRASL------LTTLGMHKDTDSNSIEDPMSITGLETFSLSYKVQWPLSIV 476
Query: 604 LNHKAIACYQMIFRHLFYCKHVERLLCKVWLYNKVVKRF-SEARLYADAFALRQRMLSCI 662
++ KA++ YQ+IFR LF+CKHVER LC W ++ ++ S+ + L + ML I
Sbjct: 477 ISKKALSKYQLIFRFLFHCKHVERQLCGAWQIHQGIRSMNSKGTAILRSSLLCRSMLKFI 536
Query: 663 QHLQYYMCVEVIEPSW 678
L +Y+ EV+EP+W
Sbjct: 537 SSLLHYLTFEVLEPNW 552
>At5g17410.1 68418.m02042 tubulin family protein similar to spindle
pole body protein [Homo
sapiens][GI:2801701][PMID:9566967], gamma-tubulin ring
protein Dgrip84 [Drosophila
melanogaster][GI:4689225][PMID: 10037793]
Length = 678
Score = 322 bits (791), Expect = 5e-88
Identities = 170/496 (34%), Positives = 273/496 (55%), Gaps = 11/496 (2%)
Query: 187 QENILIDELLYIFYGVPGNYIVHQPVKDTYDARTFLISEDVDDALKQIVQQMLPLASNYS 246
QE I+ID+LL G+ G YI + D+ F + +D AL+++ +++ PL Y
Sbjct: 63 QELIVIDDLLSALVGIEGRYISIKRFHGKEDSIAFQVDPSMDLALQELAKRIFPLCEYYL 122
Query: 247 IVRRFIEHCNMW-SGQVLHALVAAIEILLKDYYTMIAQLETEHMTGSLSLQKLWYFVLPT 305
++ +F+E + + +G V HA AA+ LL DY M+AQLE + G LS+Q LW++ P
Sbjct: 123 LIDQFVESSSQFKNGLVNHAFAAALRALLLDYQAMVAQLEHQFRLGRLSIQGLWFYCQPM 182
Query: 306 MHTMQVLAAIVTKIGKSELRGGAVLTVLHDKTNTLMGDARAQEISLFLTERACRPYLNVL 365
M +M+ LAA++ + + G VL +L + + GD + + +TE A YL++L
Sbjct: 183 MGSMRALAAVIQQASTKQFVGSGVLNLLQSQAKAMAGDNSVRSLLEKMTECASNAYLSIL 242
Query: 366 DQWIHKGTIVDPFQEFMIEDNELINKEELPVDYSADYWEKRYCIQSDRVPKFLDKFTDII 425
++W+++G I DP+ EF I +N + KE L D +A YW +RY ++ D +P FL I
Sbjct: 243 ERWVYEGIIDDPYGEFFIAENRSLKKESLSQDSTAKYWSQRYSLK-DTIPGFLANIAATI 301
Query: 426 LRTGKYLNVISQCGKSISKTNTDEIKYSLREQN--YGAIIQKAYAFAXXXXXXXXXXXYD 483
L TGKYLNV+ +CG ++ ++ K ++ N Y I+ A+ FA YD
Sbjct: 302 LTTGKYLNVMRECGHNVQVPISERSKLTIFGSNHHYLECIKAAHEFASIELVNLIKDKYD 361
Query: 484 LMGRLKSVKNYFLMSQGDFIVQFMDATDQELSKKIDDIIPXXXXXXXXXXXXXXXXXHDP 543
L+GRL+S+K+Y L+ QGDF+V FMD +EL+KK+ +I DP
Sbjct: 362 LVGRLRSIKHYLLLDQGDFLVHFMDIAREELNKKVHEISVEKLQSLLDLALRTTAAAADP 421
Query: 544 YNEDMRVELLPYDLQFQMFKILSIXXXXXXXYKHNKDCPPLTGIETFSFGMEVKWPVSLV 603
+ED+ + L + ++ +D +TG+ETFS +V+WP+S+V
Sbjct: 422 RHEDLTCCVDRASL------LTTLGMHKDTDSNSIEDPMSITGLETFSLSYKVQWPLSIV 475
Query: 604 LNHKAIACYQMIFRHLFYCKHVERLLCKVWLYNKVVKRF-SEARLYADAFALRQRMLSCI 662
++ KA++ YQ+IFR LF+CKHVER LC W ++ ++ S+ + L + ML I
Sbjct: 476 ISKKALSKYQLIFRFLFHCKHVERQLCGAWQIHQGIRSMNSKGTAILRSSLLCRSMLKFI 535
Query: 663 QHLQYYMCVEVIEPSW 678
L +Y+ EV+EP+W
Sbjct: 536 SSLLHYLTFEVLEPNW 551
>At5g06680.1 68418.m00754 tubulin family protein similar to
SP|Q96CW5 Gamma-tubulin complex component 3 {Homo
sapiens}
Length = 838
Score = 87.8 bits (208), Expect = 2e-17
Identities = 121/546 (22%), Positives = 211/546 (38%), Gaps = 89/546 (16%)
Query: 188 ENILIDELLYIFYGVPGNYIVHQPVKDTYDARTFLISEDVDDALKQIVQQMLPLASNYSI 247
E +L+ ++LY G+ G Y+ D Y + S V A + +V+ + L +
Sbjct: 186 EEVLVRDVLYASQGIDGKYVKFNSEIDGYAVQE---SVKVPRATRIMVRMLSELGWLFRK 242
Query: 248 VRRFI-EHCNMWS----GQVLHALVAAIEILLKDYYTMIAQLETEHMT------------ 290
V+ FI E + + G V A AA++ L DYY ++A LE + M
Sbjct: 243 VKTFITESMDRFPAEDVGTVGQAFCAALQDELSDYYKLLAVLEAQAMNPIPLVSESASSN 302
Query: 291 GSLSLQKLWYFVLPTMHTMQVLAAIVTKIGKSELRGGAVLTVLHDKTNTLMGDARAQEIS 350
LSL++L + M M+++A +V K LRGGA+ +H + GD +
Sbjct: 303 NYLSLRRLSVWFAEPMVKMRLMAVLVDKC--KVLRGGAMAGAIH--LHAQHGDPLVHDFM 358
Query: 351 LFLTERACRPYLNVLDQWIHKGTIVDPFQEFMIEDNELINKEELPVDYSADYWEKRYCIQ 410
+ L C P ++ W+ +G + D F EF + + + VD W + Y +
Sbjct: 359 MSLLRCVCSPLFEMVRSWVLEGELEDTFGEFFVVG------QPVKVDL---LWREGYKLH 409
Query: 411 SDRVPKFLD-KFTDIILRTGKYLNVISQC----------GKSISKTNTDEIKYSLREQNY 459
+P F+ ILRTGK +N + C ++ + + T + L
Sbjct: 410 PAMLPSFISPSLAQRILRTGKSINFLRVCCDDHGWADAASEAAAASGTTTRRGGLGYGET 469
Query: 460 GA---IIQKAYAFAXXXXXXXXXXXYDLMGRLKSVKNYFLMSQGDFIVQFMDATDQELSK 516
A ++ +A Y ++K Y L+ QGDF+ MD +LS+
Sbjct: 470 DALEHLVTEAAKRIDKHLLDVLYKRYKFKEHCLAIKRYLLLGQGDFVQYLMDIVGPKLSE 529
Query: 517 KIDDIIPXXXXXXXXXXXXXXXXXHDPYN--EDMRVELLPYDLQFQMFKILSIXXXXXXX 574
++I +D + + +RV+++P+ + + + S+
Sbjct: 530 PANNISSFELAGFLEAAIRASNAQYDDRDMLDRLRVKMMPHGSGDRGWDVFSLE------ 583
Query: 575 YKHNKDCPPLTGIETFSFGMEVKWPVSLVLNHKAIACYQMIFRHLFYCKHVERLLCKVW- 633
E + P+ V ++ Y +F L+ K VE L +W
Sbjct: 584 -------------------YEARVPLDTVFTESVLSKYLRVFNFLWKLKRVEHALIGIWK 624
Query: 634 -------LYNKVVKRFSEARLYADAFALRQ------RMLSCIQHLQYYMCVEVIEPSWCQ 680
N VK S +L ALR+ M + + QYY+ EV+E SW
Sbjct: 625 TMKPNCITSNSFVKLQSSVKLQL-LSALRRCQVLWNEMNHFVTNFQYYIMFEVLEVSWSN 683
Query: 681 LIQSLD 686
+ ++
Sbjct: 684 FSKEME 689
>At3g53760.1 68416.m05939 tubulin family protein similar to
SP|Q9SC88 Gamma-tubulin complex component 4 homolog
{Medicago truncatula}, SP|Q9UGJ1|GCP4_HUMAN
Gamma-tubulin complex component 4 {Homo sapiens};
contains Pfam profile PF04130: Spc97 / Spc98 family
Length = 745
Score = 46.0 bits (104), Expect = 8e-05
Identities = 43/214 (20%), Positives = 80/214 (37%), Gaps = 18/214 (8%)
Query: 483 DLMGRLKSVKNYFLMSQGDFIVQFMDATDQELS-KKIDDIIPXXXXXXXXXXXXXXXXXH 541
DL G LK++K+YFL+ +GDF F++ + Q +
Sbjct: 400 DLNGHLKALKDYFLLEKGDFFQCFLEESRQLMRLPPRQSTGESDLMVPFQLAATKTIAEE 459
Query: 542 DPYNEDMRVELLPYDLQFQMFKILSIXXXXXXXYKHN-KDCPPLTGIETFSFGMEVKWPV 600
D Y + + + + + + + + K N + G + + V WP+
Sbjct: 460 DKYFSRVSLRMPSFGVTVRSSQADMVRSKVSLTGKANLTSDTSVDGWDAIALEYSVDWPM 519
Query: 601 SLVLNHKAIACYQMIFRHLFYCKHVERLLCKVWLYNKVVKRFSEARLYADA--------- 651
L + ++ Y +F++L K + L K W A+ D
Sbjct: 520 QLFFTQEVLSKYLKVFQYLIRLKRTQMELEKSWASVMHQDHIESAQHRKDGLNGSTSQQR 579
Query: 652 -------FALRQRMLSCIQHLQYYMCVEVIEPSW 678
+ +R+ M I++LQ+Y+ V+VIE W
Sbjct: 580 RQGIRPMWRVREHMAFLIRNLQFYIQVDVIESQW 613
Score = 30.7 bits (66), Expect = 3.4
Identities = 33/139 (23%), Positives = 62/139 (44%), Gaps = 17/139 (12%)
Query: 312 LAAIVTKIGKSELRGGAVLTVLHDKTNTLMGDARAQEISLFLTERACRPYLNVLDQWIHK 371
L ++ +I + ++RGG +L VL+ + + + + R L + N L W+
Sbjct: 164 LYEVILEIERDDIRGGQLLNVLNKRCHCGVPELRTCLQRLLWNGH--QVMYNQLAAWMVY 221
Query: 372 GTIVDPFQEFMI---EDNEL---INKEELPV--------DYSADYWEKRYCIQSDRVPKF 417
G + DP EF I +D +L ++EE+ + S W + I D +P +
Sbjct: 222 GILQDPHGEFFIKRQDDGDLDHRSSQEEVSEKLARTSVHETSLTDWHSGFHISLDMLPDY 281
Query: 418 LD-KFTDIILRTGKYLNVI 435
+ + + IL GK + V+
Sbjct: 282 IPMRLGESILFAGKAIRVL 300
>At3g43610.1 68416.m04640 tubulin family protein
Length = 1120
Score = 43.2 bits (97), Expect = 6e-04
Identities = 31/115 (26%), Positives = 52/115 (45%), Gaps = 8/115 (6%)
Query: 325 RGGAVLTVLHDKTNTLMGDARAQEISLFLTERACRPYLNVLDQWIHKGTIVDPFQEFMIE 384
RG +LT L+ + + D + FL + C PY + W+ K + DP +EF++E
Sbjct: 272 RGSDLLTYLYSQLQ--VADPTHSAMLKFLFLKTCEPYCEFIRSWMFKAELNDPHKEFIVE 329
Query: 385 DNELINKEELPVDYSADYWE--KRYCIQSDRVPKFLDKFTDIILRTGKYLNVISQ 437
E ++ K + VP FL+ F + I+R G+ L VI++
Sbjct: 330 ----CRSESTSFSWNKPGISPLKSVRERGGLVPCFLNGFLEPIVRAGQQLQVITK 380
Score = 39.5 bits (88), Expect = 0.007
Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 582 PPLT-GIETFSF---GMEVKWPVSLVLNHKAIACYQMIFRHLFYCKHVERLLCKVWLYNK 637
PP T G+ +F F G V WP+S++L A+ Y +F L K +L VW K
Sbjct: 966 PPSTIGVRSFDFLRLGYRVDWPISIILTCDALTAYADVFSFLVQVKLAAYVLTDVWCSLK 1025
Query: 638 V 638
V
Sbjct: 1026 V 1026
>At1g20570.1 68414.m02565 tubulin family protein
Length = 976
Score = 43.2 bits (97), Expect = 6e-04
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 6/57 (10%)
Query: 360 PYLNVLDQWIHKGTIVDPFQEFMIEDNELINKEELPVDYSADYWEKRYCIQSDRVPK 416
PY+ LD W+ +GT+ DPF+E N+ ++ + A++WEK Y + PK
Sbjct: 236 PYVESLDSWLFEGTLDDPFEELFFTANQSVSVSD------AEFWEKSYLLTRVLGPK 286
Score = 37.9 bits (84), Expect = 0.022
Identities = 23/101 (22%), Positives = 45/101 (44%), Gaps = 8/101 (7%)
Query: 587 IETFSFGMEVKWPVSLVLNHKAIACYQMIFRHLFYCKHVERLLCKVWLYNKVVKRFSEAR 646
+E+ F +V WP+ L+ N +AI Y + R + RL+ K + S +
Sbjct: 757 LESLKFTYKVPWPLELIANSEAIKKYNQVKRAKYVLDKARRLMWK--------GKGSATK 808
Query: 647 LYADAFALRQRMLSCIQHLQYYMCVEVIEPSWCQLIQSLDK 687
+ L Q++L+ + Y+ V +W +L +++ K
Sbjct: 809 IRKHHCLLEQKLLNFVDAFHQYVMDRVYHTAWRELCEAMVK 849
>At1g80260.1 68414.m09396 tubulin family protein
Length = 951
Score = 40.3 bits (90), Expect = 0.004
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 8/65 (12%)
Query: 360 PYLNVLDQWIHKGTIVDPFQEFMIEDNELINKEELPVDYSADYWEKRYCIQSDRVPKFLD 419
PY+ LD W+ +GT+ DP +E N+ ++ ++ A++WEK Y Q +VP
Sbjct: 220 PYIEGLDSWLFEGTLDDPCEELFFTANQSVSVDD------AEFWEKSY--QLMKVPNSKS 271
Query: 420 KFTDI 424
T +
Sbjct: 272 NVTSL 276
>At3g32190.1 68416.m04102 hypothetical protein
Length = 358
Score = 32.3 bits (70), Expect = 1.1
Identities = 40/175 (22%), Positives = 64/175 (36%), Gaps = 11/175 (6%)
Query: 22 FDCIQNDPNYGNCNLSSKQVNEYAQRLALKASNAKAFLKKYEELKNRNTDNLSDVIVLFY 81
+D IQ + + LS + N Y L AK+ K +E+K + + IV F
Sbjct: 122 YDKIQEELSNARGRLSESESNAYDLSNQLSKLQAKSASKARKEVKGHGIEWIQGAIV-FI 180
Query: 82 KLVCDERXXXXXXXXXXXXXXLGDNKHQITKEDLPQIKDKL-LKAVDESKKLVMKSFEEK 140
+ L D H ED + +++ LKAV K+ + +
Sbjct: 181 QTEKTRTELESDIKEYESNLLLLDQTHD---EDFSEEQERSELKAVLAEKRSRLAAL--P 235
Query: 141 ESRLQPTWYSSLDLPNWQKDHPAMSWDFPKDP----VPIISSLAGIPIASQENIL 191
S P + + + W P DP VPI+S + P+A+ IL
Sbjct: 236 SSSFNPQQFEEFFTESPPLSESGLDWTSPSDPVEPEVPIMSVVTPEPVATPPEIL 290
>At3g49400.1 68416.m05400 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400); low
similarity (47%) to Agamous-like MADS box protein AGL5
(SP:P29385) {Arabidopsis thaliana}
Length = 892
Score = 31.9 bits (69), Expect = 1.5
Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 4/80 (5%)
Query: 378 FQEFMIEDNELINKEELPVDYSADYWEKRYCIQSDRVPKFLDKFTDIILRTGKYLNVISQ 437
F++ M E EL+ + L V Y + + D VPK +F+D+ R LNVIS+
Sbjct: 596 FKQSMPEFVELVLTKWLSVSYLGFHDD---ISMEDLVPKITKRFSDVPSRLLHILNVISR 652
Query: 438 CGKSISKTNTDEIKYSLREQ 457
+S+ T+EI L+ Q
Sbjct: 653 -RVMLSELKTEEINRKLQGQ 671
>At5g03640.1 68418.m00323 protein kinase family protein contains
serine/threonine protein kinase domain,
INTERPRO:IPR002290
Length = 926
Score = 30.3 bits (65), Expect = 4.5
Identities = 15/45 (33%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 376 DPFQEFMIEDNELINKEELPVDYSADYWEKRYCIQSDRVPKFLDK 420
DP ++ ++E +E+ K+EL D+S+ +E + I + K LDK
Sbjct: 336 DPSKDSLVEPHEICAKDELASDFSSSSYESSHEISASAETK-LDK 379
>At5g16160.1 68418.m01889 expressed protein
Length = 133
Score = 29.9 bits (64), Expect = 5.9
Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 5/51 (9%)
Query: 29 PNYGNCNLSSKQVNE----YAQRLALKASNAKAFLKKYEELKNRNTDNLSD 75
PN+ NL+ KQ+++ + +R+ +KA NAK KK + KN + + D
Sbjct: 31 PNFNRSNLTQKQISKLQELHKRRMQIKA-NAKIHKKKPKASKNSQSKAIED 80
>At5g44310.2 68418.m05424 late embryogenesis abundant
domain-containing protein / LEA domain-containing
protein low similarity to 51 kDa seed maturation protein
[Glycine max] GI:414977; contains Pfam profile PF02987:
Late embryogenesis abundant protein
Length = 331
Score = 29.5 bits (63), Expect = 7.9
Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
Query: 13 GCNLEADSVFDCIQNDPNYGNCNLSSKQVNEYAQRLALKASNAKAFLKKYEELKNRNTDN 72
G + AD +D + NY + +VNE A R A KA K K Y E ++
Sbjct: 198 GASRAADKAYDVKEKTKNYAE--QTKDKVNEGASRAADKAEETKDKAKDYAEDSKEKAED 255
Query: 73 LS 74
++
Sbjct: 256 MA 257
>At5g44310.1 68418.m05423 late embryogenesis abundant
domain-containing protein / LEA domain-containing
protein low similarity to 51 kDa seed maturation protein
[Glycine max] GI:414977; contains Pfam profile PF02987:
Late embryogenesis abundant protein
Length = 295
Score = 29.5 bits (63), Expect = 7.9
Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
Query: 13 GCNLEADSVFDCIQNDPNYGNCNLSSKQVNEYAQRLALKASNAKAFLKKYEELKNRNTDN 72
G + AD +D + NY + +VNE A R A KA K K Y E ++
Sbjct: 162 GASRAADKAYDVKEKTKNYAE--QTKDKVNEGASRAADKAEETKDKAKDYAEDSKEKAED 219
Query: 73 LS 74
++
Sbjct: 220 MA 221
>At4g20260.2 68417.m02960 DREPP plasma membrane polypeptide family
protein contains Pfam profile: PF05558 DREPP plasma
membrane polypeptide
Length = 225
Score = 29.5 bits (63), Expect = 7.9
Identities = 12/23 (52%), Positives = 16/23 (69%)
Query: 124 KAVDESKKLVMKSFEEKESRLQP 146
K DESK+ + K EEK++ LQP
Sbjct: 31 KTFDESKETINKEIEEKKTELQP 53
>At4g20260.1 68417.m02959 DREPP plasma membrane polypeptide family
protein contains Pfam profile: PF05558 DREPP plasma
membrane polypeptide
Length = 225
Score = 29.5 bits (63), Expect = 7.9
Identities = 12/23 (52%), Positives = 16/23 (69%)
Query: 124 KAVDESKKLVMKSFEEKESRLQP 146
K DESK+ + K EEK++ LQP
Sbjct: 31 KTFDESKETINKEIEEKKTELQP 53
>At3g22760.1 68416.m02870 CXC domain containing TSO1-like protein 1
(SOL1) identical to CXC domain containing TSO1-like
protein 1 (SOL1) [Arabidopsis thaliana] GI:7767427;
contains Pfam profile PF03638: Tesmin/TSO1-like CXC
domain; supporting cDNA
gi|7767426|gb|AF205142.1|AF205142
Length = 609
Score = 29.5 bits (63), Expect = 7.9
Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 7/81 (8%)
Query: 169 PKDPVPIISSLAGIPIASQENILIDELLYIFYGVPGN-----YIVHQPVKDTYD-ARTFL 222
P P+P LA +PI+S N L+ + +G G+ Y + +P +R
Sbjct: 488 PSTPIPFRQPLAQLPISS-NNRLLPPQSHFHHGAIGSSSSGIYNIRKPDMSLLSHSRIET 546
Query: 223 ISEDVDDALKQIVQQMLPLAS 243
I+ED+DD + ++ + S
Sbjct: 547 ITEDIDDMSENLIHSPITTLS 567
>At3g07190.1 68416.m00857 expressed protein
Length = 220
Score = 29.5 bits (63), Expect = 7.9
Identities = 14/39 (35%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Query: 107 KHQITKEDLPQIKDKLLKAVDESKKLVMKSFEEKESRLQ 145
K + T +++ Q+K+K L V E+ K + K +EKE++L+
Sbjct: 142 KEEKTSKEIKQLKEK-LSCVSENLKKLEKESKEKETKLE 179
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.322 0.137 0.412
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,061,397
Number of Sequences: 28952
Number of extensions: 603214
Number of successful extensions: 1454
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 1424
Number of HSP's gapped (non-prelim): 30
length of query: 694
length of database: 12,070,560
effective HSP length: 86
effective length of query: 608
effective length of database: 9,580,688
effective search space: 5825058304
effective search space used: 5825058304
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 63 (29.5 bits)
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