Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000979-TA|BGIBMGA000979-PA|IPR007259|Spc97/Spc98
(694 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_0412 + 25023758-25023826,25023927-25023991,25024082-250241... 242 6e-64
09_04_0310 + 16578679-16580936,16581027-16581294 87 3e-17
04_04_0827 - 28457858-28458028,28458513-28458669,28458984-284590... 44 5e-04
12_02_1042 + 25638585-25638711,25639585-25639745,25639873-256400... 38 0.027
05_01_0396 - 3121189-3121226,3121552-3121609,3121938-3122060,312... 38 0.036
02_04_0038 - 19110520-19110574,19110684-19110811,19110912-191110... 35 0.25
05_04_0246 + 19350362-19350442,19351250-19351383,19351847-193518... 31 4.1
02_02_0471 - 10714440-10714846,10714947-10715034,10715427-107155... 30 5.4
08_02_0678 - 19971416-19971930,19971970-19973347,19974122-199745... 30 7.1
01_05_0147 + 18597194-18597643,18598347-18598681,18600073-186001... 30 7.1
03_06_0040 + 31240164-31241102,31241280-31241897 29 9.4
>04_04_0412 +
25023758-25023826,25023927-25023991,25024082-25024145,
25024806-25024940,25025029-25025160,25025470-25025553,
25025638-25025736,25025992-25026083,25026280-25026352,
25026476-25026628,25026721-25026840,25026926-25026979,
25027188-25027271,25027431-25027505,25027585-25027728,
25028016-25028123,25028340-25028459,25028909-25029102,
25029193-25029319
Length = 663
Score = 242 bits (593), Expect = 6e-64
Identities = 142/422 (33%), Positives = 216/422 (51%), Gaps = 9/422 (2%)
Query: 177 SSLAGIPIASQENILIDELLYIFYGVPGNYIVHQPVKDTYDARTFLISEDVDDALKQIVQ 236
S + ++ QE ++ID+LL G+ G YI + V+ F I +D AL+++ +
Sbjct: 56 SVIGSYAVSVQELLVIDDLLSALVGIEGRYISIKRVRGKEGYVVFQIDSSMDLALQELTR 115
Query: 237 QMLPLASNYSIVRRFIE-HCNMWSGQVLHALVAAIEILLKDYYTMIAQLETEHMTGSLSL 295
++ PL ++ +V F+E + SG V HAL AA+ L DY M+AQLE + G LS+
Sbjct: 116 RIFPLCEDFVLVYHFVESRSHFKSGLVNHALAAALRAFLLDYQAMVAQLEHQFRLGRLSV 175
Query: 296 QKLWYFVLPTMHTMQVLAAIVTKIGKSELRGGAVLTVLHDKTNTLMGDARAQEISLFLTE 355
Q LW+F M ++ LA +V K + G A L +L + + GD+ + + +TE
Sbjct: 176 QGLWFFCQRMMSSLNALAVLVEKAISNNTSGSATLNLLQSQAKAMAGDSAVRSLLEKMTE 235
Query: 356 RACRPYLNVLDQWIHKGTIVDPFQEFMIEDNELINKEELPVDYSADYWEKRYCIQSDRVP 415
A YL +L++W+++G I DP+ EF I +N+ + KE L DY A YW++RY ++ D +P
Sbjct: 236 CASAAYLRMLERWVYEGVIDDPYGEFFIAENKSLQKESLTQDYDAKYWQQRYSLK-DGIP 294
Query: 416 KFLDKFTDIILRTGKYLNVISQCGKSISKTNTDEIKYSLREQN--YGAIIQKAYAFAXXX 473
FL IL TGKYLNV+ +C ++ ++ K N Y I+ AY FA
Sbjct: 295 SFLTNVAATILTTGKYLNVMRECEYTVQVPLSESSKLMGFGSNHQYLECIKSAYDFASGE 354
Query: 474 XXXXXXXXYDLMGRLKSVKNYFLMSQGDFIVQFMDATDQELSKKIDDIIPXXXXXXXXXX 533
YDL+G+L+S+K Y L+ QGDF+V FMD +EL+KK ++I
Sbjct: 355 LLTLMKDKYDLIGKLRSLKRYLLLDQGDFLVHFMDIAREELTKKPEEISVEKLQSLVDIA 414
Query: 534 XXXXXXXHDPYNEDMR--VELLPYDLQFQMFKILSIXXXXXXXYKHNKDCP-PL--TGIE 588
DP +ED+ VE + K L + D P PL TG+E
Sbjct: 415 LRSTAAASDPSHEDLTCCVERSSLLKKLSTLKDLDCAYPSDKLVAADVDHPMPLSVTGLE 474
Query: 589 TF 590
TF
Sbjct: 475 TF 476
>09_04_0310 + 16578679-16580936,16581027-16581294
Length = 841
Score = 87.4 bits (207), Expect = 3e-17
Identities = 96/369 (26%), Positives = 154/369 (41%), Gaps = 51/369 (13%)
Query: 188 ENILIDELLYIFYGVPGNYIVHQPVKDTYDARTFLISEDVDDALKQIVQQMLPLASNYSI 247
E L+ ++LY G+ G Y+ D YD + V + + +V+++ L +
Sbjct: 183 EAALVRDVLYACQGIDGRYVRFDKGSDAYDLPDGV---RVPRSTRTLVRKLCELGWLFRK 239
Query: 248 VRRFIEHCNMWS--------GQVLHALVAAIEILLKDYYTMIAQLETEHMT-----GS-- 292
VR FI S G V A +A++ L DYY ++A LE+ + GS
Sbjct: 240 VRGFISDNISRSPSDAATEVGTVAQAFCSALQEELSDYYKLLAVLESYSLNPIPTPGSDS 299
Query: 293 ------LSLQKLWYFVLPTMHTMQVLAAIVTKIGKSELRGGAVLTVLHDKTNTLMGDARA 346
LSL++L ++ M+++A +V G LRGGA+ +H GD
Sbjct: 300 GVSGNYLSLRRLAVWLAEPAVRMRLMAVLVD--GCRGLRGGAMAGAIHGHAQH--GDPTF 355
Query: 347 QEISLFLTERACRPYLNVLDQWIHKGTIVDPFQEFMIEDNELINKEELPVDYSADYWEKR 406
Q+ L R C P ++ W+ +G + D F EF I + + E L W++
Sbjct: 356 QDFMGRLLRRVCSPLFEMVRSWVLEGELEDVFAEFFIV-GQPVKAESL--------WQEG 406
Query: 407 YCIQSDRVPKFLDK-FTDIILRTGKYLNVISQC----GKSISKTNTDEIKYSLREQ---N 458
Y +QSD +P F+ ILRTGK +N + C G + + T + +
Sbjct: 407 YLLQSDMLPAFISPVLAQRILRTGKSINFLKVCCDDNGWADAATEAAVCVGTTTSRGGLG 466
Query: 459 YG------AIIQKAYAFAXXXXXXXXXXXYDLMGRLKSVKNYFLMSQGDFIVQFMDATDQ 512
YG A++ +A Y ++K Y L+ QGDF+ MD
Sbjct: 467 YGQIDALEALVVEAAKRIDRHLMDVIHKRYRFKDHCLAIKRYLLLGQGDFVQYLMDVVGP 526
Query: 513 ELSKKIDDI 521
ELS+ + I
Sbjct: 527 ELSEPANRI 535
>04_04_0827 -
28457858-28458028,28458513-28458669,28458984-28459083,
28459204-28459231,28459321-28459396,28461276-28461355,
28461642-28461805,28461897-28462056,28462154-28462277,
28462901-28463941,28464141-28464259,28464512-28464823,
28465222-28465425,28466068-28466751,28467301-28467474
Length = 1197
Score = 43.6 bits (98), Expect = 5e-04
Identities = 28/99 (28%), Positives = 48/99 (48%), Gaps = 5/99 (5%)
Query: 352 FLTERACRPYLNVLDQWIHKGTIVDPFQEFMI---EDNELINKEELPVDYSADYWEKRYC 408
+L R+C PY N + WI++ ++ DP++EF+I ++ PVD K
Sbjct: 298 YLFVRSCEPYCNFIKSWIYRASVDDPYEEFLITQAKNKRTQGGSSDPVDNFTLLSLKG-- 355
Query: 409 IQSDRVPKFLDKFTDIILRTGKYLNVISQCGKSISKTNT 447
P FL +LRTG+ L V+ + +S + ++T
Sbjct: 356 ANHVSAPCFLKDVCGPLLRTGQQLQVLMKLLESCNLSDT 394
Score = 40.3 bits (90), Expect = 0.005
Identities = 24/101 (23%), Positives = 50/101 (49%), Gaps = 4/101 (3%)
Query: 587 IETFSFGMEVKWPVSLVLNHKAIACYQMIFRHLFYCKHVERLLCKVWLYNKVVKRFSEAR 646
++ G +V WPV++V+ +A+ Y IFR+L + L +VW + K + +
Sbjct: 944 LDDILLGYKVDWPVNIVITEEALKTYAEIFRYLVQVRLAVFSLTEVWRFLKELTQLISRS 1003
Query: 647 LYADAFALRQRMLSCIQHLQYYM--CVEVIEPSWCQLIQSL 685
+ L++ LS + L+Y + C+ ++ + ++ SL
Sbjct: 1004 SHNRPDVLKE--LSSVMKLRYEIKKCIFFVKKHYHSIVISL 1042
>12_02_1042 +
25638585-25638711,25639585-25639745,25639873-25640064,
25640221-25640315,25640645-25640807,25640905-25641015,
25641611-25642741,25642813-25642965,25643060-25643159,
25643333-25643427,25643508-25643681,25643751-25643807,
25643887-25643958,25644151-25644249,25644320-25644451,
25644549-25644722,25644830-25644957,25645065-25645119
Length = 1072
Score = 37.9 bits (84), Expect = 0.027
Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 6/69 (8%)
Query: 342 GDARAQEISLFLTERACRPYLNVLDQWIHKGTIVDPFQEFMIEDNELINKEELPVDYSAD 401
G+ + L + PYL LD W++ G + DP++E N+ + +D A
Sbjct: 245 GEGEPYHMLLVIFAETLLPYLQCLDSWLYDGILDDPYEEMFFYANKAVT-----IDQPA- 298
Query: 402 YWEKRYCIQ 410
+WE Y ++
Sbjct: 299 FWEMSYMLR 307
>05_01_0396 -
3121189-3121226,3121552-3121609,3121938-3122060,
3122170-3122323,3122590-3122678,3123185-3123410,
3123575-3123760,3123859-3123914,3124381-3124464,
3124547-3124627,3124773-3125045,3125143-3125263,
3126094-3126230,3126406-3126697,3127401-3127585
Length = 700
Score = 37.5 bits (83), Expect = 0.036
Identities = 29/111 (26%), Positives = 52/111 (46%), Gaps = 16/111 (14%)
Query: 584 LTGIETFSFGMEVKWPVSLVLNHKAIACYQMIFRHLFYCKHVERLLCKVW--LYNKVVKR 641
L G ++ + V WP+ L ++ Y+ +F++L K + L K W + ++
Sbjct: 445 LDGWDSIALEYSVDWPLQLFFTPDVVSKYRKVFQYLIRLKRTQMELEKSWAAVMHQDHAD 504
Query: 642 FSE---ARLYADA-----------FALRQRMLSCIQHLQYYMCVEVIEPSW 678
FS+ R DA + +R+ M I++LQ+Y+ V+VIE W
Sbjct: 505 FSDYCKDRKNGDATQLRRQRSKPFWRVREHMAFLIRNLQFYIQVDVIESQW 555
Score = 32.3 bits (70), Expect = 1.3
Identities = 12/20 (60%), Positives = 18/20 (90%)
Query: 483 DLMGRLKSVKNYFLMSQGDF 502
DL G LK++K+YFL+++GDF
Sbjct: 370 DLNGHLKALKDYFLLAKGDF 389
>02_04_0038 -
19110520-19110574,19110684-19110811,19110912-19111085,
19111189-19111320,19111391-19111489,19111680-19111751,
19111831-19111887,19111957-19112130,19112211-19112305,
19112478-19112577,19112672-19112824,19112896-19114026,
19114621-19114731,19114829-19114991,19115364-19115458,
19115613-19115804,19115929-19116069
Length = 1023
Score = 34.7 bits (76), Expect = 0.25
Identities = 18/69 (26%), Positives = 31/69 (44%), Gaps = 6/69 (8%)
Query: 342 GDARAQEISLFLTERACRPYLNVLDQWIHKGTIVDPFQEFMIEDNELINKEELPVDYSAD 401
G+ + L + PYL LD W++ G + DP +E N+ + +D A
Sbjct: 196 GEGEPYHMLLVIFAGTLLPYLQCLDSWLYDGILDDPNEEMFFYANKAVT-----IDQPA- 249
Query: 402 YWEKRYCIQ 410
+WE Y ++
Sbjct: 250 FWEMSYMLR 258
>05_04_0246 +
19350362-19350442,19351250-19351383,19351847-19351895,
19352503-19352667,19353358-19353414,19353524-19353598
Length = 186
Score = 30.7 bits (66), Expect = 4.1
Identities = 15/37 (40%), Positives = 20/37 (54%)
Query: 387 ELINKEELPVDYSADYWEKRYCIQSDRVPKFLDKFTD 423
+L+ K L +D S + RY I +DR KF D F D
Sbjct: 11 DLVGKHRLVLDLSCRKKDGRYAIVTDRWQKFSDVFVD 47
>02_02_0471 -
10714440-10714846,10714947-10715034,10715427-10715516,
10715614-10715727
Length = 232
Score = 30.3 bits (65), Expect = 5.4
Identities = 13/26 (50%), Positives = 20/26 (76%)
Query: 121 KLLKAVDESKKLVMKSFEEKESRLQP 146
+L+K+ DESK+ + FEEK++ LQP
Sbjct: 29 ELIKSFDESKEGINGEFEEKKADLQP 54
>08_02_0678 -
19971416-19971930,19971970-19973347,19974122-19974518,
19974533-19974645,19977436-19977903,19977935-19978059,
19978192-19978452,19984254-19984647
Length = 1216
Score = 29.9 bits (64), Expect = 7.1
Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 7/70 (10%)
Query: 316 VTKIGKSELRGGAVLTVLHDKTNTLMGDARAQEISLFLTERACRPYLNVLDQWIHKGTIV 375
+ ++ +SE+ G V+T+ DK L D + E + ++A +LN Q HKGT+V
Sbjct: 482 IQQLDQSEVNEGNVMTISPDK---LTPDQKELEA---IMQQAQNQFLNSFMQ-THKGTVV 534
Query: 376 DPFQEFMIED 385
+Q ++ D
Sbjct: 535 QKYQVRVVAD 544
>01_05_0147 +
18597194-18597643,18598347-18598681,18600073-18600147,
18600325-18600427,18601554-18601642,18602953-18603064,
18604093-18604146,18604271-18604319,18606236-18606347,
18606389-18606436,18607000-18607327
Length = 584
Score = 29.9 bits (64), Expect = 7.1
Identities = 14/50 (28%), Positives = 23/50 (46%)
Query: 122 LLKAVDESKKLVMKSFEEKESRLQPTWYSSLDLPNWQKDHPAMSWDFPKD 171
L+ + SK+ V + +ES+ + D W+ +HP WD KD
Sbjct: 502 LVDTYNSSKRSVSLVQKHRESKKEKKKQKQRDKEEWEGNHPWKPWDREKD 551
>03_06_0040 + 31240164-31241102,31241280-31241897
Length = 518
Score = 29.5 bits (63), Expect = 9.4
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 581 CPPLTGIETFSFGMEVKWPVSLVLNHKAI 609
C PL G T + ++W +SL+LNH I
Sbjct: 312 CAPLFGAGTETTSTTIEWAMSLLLNHPEI 340
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.322 0.137 0.412
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,709,427
Number of Sequences: 37544
Number of extensions: 681574
Number of successful extensions: 1441
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 1416
Number of HSP's gapped (non-prelim): 18
length of query: 694
length of database: 14,793,348
effective HSP length: 87
effective length of query: 607
effective length of database: 11,527,020
effective search space: 6996901140
effective search space used: 6996901140
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 63 (29.5 bits)
- SilkBase 1999-2023 -