Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000979-TA|BGIBMGA000979-PA|IPR007259|Spc97/Spc98
(694 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92780-4|CAI46549.1| 642|Caenorhabditis elegans Hypothetical pr... 32 1.2
AL021466-4|CAI46582.1| 642|Caenorhabditis elegans Hypothetical ... 32 1.2
U39647-7|AAP31441.1| 544|Caenorhabditis elegans Twik family of ... 31 3.6
U39647-6|AAM51529.1| 505|Caenorhabditis elegans Twik family of ... 31 3.6
U39647-5|AAM51531.1| 576|Caenorhabditis elegans Twik family of ... 31 3.6
U39647-4|AAM51532.1| 562|Caenorhabditis elegans Twik family of ... 31 3.6
U39647-3|AAW30673.1| 512|Caenorhabditis elegans Twik family of ... 31 3.6
U39647-2|AAM51530.1| 498|Caenorhabditis elegans Twik family of ... 31 3.6
AF083651-1|AAC32862.1| 562|Caenorhabditis elegans putative pota... 31 3.6
AF083649-1|AAC32860.1| 381|Caenorhabditis elegans putative pota... 31 3.6
AF083648-1|AAC32859.1| 544|Caenorhabditis elegans putative pota... 31 3.6
AF083647-1|AAC32858.1| 576|Caenorhabditis elegans putative pota... 31 3.6
AF083644-1|AAC32855.1| 498|Caenorhabditis elegans putative pota... 31 3.6
AF083643-1|AAC32854.1| 512|Caenorhabditis elegans putative pota... 31 3.6
Z49068-9|CAA88861.1| 540|Caenorhabditis elegans Hypothetical pr... 30 6.3
U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein. 30 6.3
>Z92780-4|CAI46549.1| 642|Caenorhabditis elegans Hypothetical
protein C45G3.5 protein.
Length = 642
Score = 32.3 bits (70), Expect = 1.2
Identities = 38/188 (20%), Positives = 74/188 (39%), Gaps = 13/188 (6%)
Query: 252 IEHCNMWSGQVLHALVAAIEILLKDYYTMIAQLETEHMTGSLSLQKLWYFVLPTMHT--- 308
I H ++ + A+ + IE + + T I ++GS + +L MHT
Sbjct: 122 ITHDSVTFSSISSAVASTIEKKVNGFITKICT----KLSGSTEANQQMNQLLREMHTIHE 177
Query: 309 -MQVLAAIVTKIGKSELRGGAVLTVLHDKTNTLMGDARAQEISLFLTERACRPYLNVLDQ 367
+ IV I +L GG VL++L K + Q + + + + + + +
Sbjct: 178 SLNFYNGIVKSIYLDQLIGGQVLSLLDSKRRHVFSGNVVQNLD-DVFQAGWKVFARSIGR 236
Query: 368 WIHKGTIVDPFQEFMIEDNELINKEE----LPVDYSADYWEKRYCIQSDRVPKFLDKFTD 423
+ K EF+I + + + +P + S RY + P F K+ D
Sbjct: 237 LVCKFEADHMDYEFVIWSTKQMTDSQCKTLVPSNPSRQIKSSRYVVIESLCPDFFKKYLD 296
Query: 424 IILRTGKY 431
I++R ++
Sbjct: 297 ILVRCAEF 304
>AL021466-4|CAI46582.1| 642|Caenorhabditis elegans Hypothetical
protein C45G3.5 protein.
Length = 642
Score = 32.3 bits (70), Expect = 1.2
Identities = 38/188 (20%), Positives = 74/188 (39%), Gaps = 13/188 (6%)
Query: 252 IEHCNMWSGQVLHALVAAIEILLKDYYTMIAQLETEHMTGSLSLQKLWYFVLPTMHT--- 308
I H ++ + A+ + IE + + T I ++GS + +L MHT
Sbjct: 122 ITHDSVTFSSISSAVASTIEKKVNGFITKICT----KLSGSTEANQQMNQLLREMHTIHE 177
Query: 309 -MQVLAAIVTKIGKSELRGGAVLTVLHDKTNTLMGDARAQEISLFLTERACRPYLNVLDQ 367
+ IV I +L GG VL++L K + Q + + + + + + +
Sbjct: 178 SLNFYNGIVKSIYLDQLIGGQVLSLLDSKRRHVFSGNVVQNLD-DVFQAGWKVFARSIGR 236
Query: 368 WIHKGTIVDPFQEFMIEDNELINKEE----LPVDYSADYWEKRYCIQSDRVPKFLDKFTD 423
+ K EF+I + + + +P + S RY + P F K+ D
Sbjct: 237 LVCKFEADHMDYEFVIWSTKQMTDSQCKTLVPSNPSRQIKSSRYVVIESLCPDFFKKYLD 296
Query: 424 IILRTGKY 431
I++R ++
Sbjct: 297 ILVRCAEF 304
>U39647-7|AAP31441.1| 544|Caenorhabditis elegans Twik family of
potassium channelsprotein 17, isoform e protein.
Length = 544
Score = 30.7 bits (66), Expect = 3.6
Identities = 38/169 (22%), Positives = 64/169 (37%), Gaps = 10/169 (5%)
Query: 227 VDDALKQIVQQMLPLASNYSIVRRFIEHCNMWSGQVLHALVAAIEILLKDYYTMIAQLET 286
V D QI+ + + L +N S + +L +L A E D +T QL T
Sbjct: 180 VFDIYSQIMNETIALTNNQSDQATIVSRMR----PLLESLSRAHEY--DDKFTDTNQLWT 233
Query: 287 EHMTGSLSLQKLWYFVLPTMHTMQVLAAIVTKIGKSELRGGAVLTVLHDKTNTLMGDARA 346
G + W F T++ + V+ + G + TV + A
Sbjct: 234 GEQDG---MTTRWTFAAATLYALTVITSTGYDHVTPATDPGRIFTVFFGLIGIPLMFITA 290
Query: 347 QEISLFLTERACRPYLNVLDQWIHKGTIVDPFQEFMIE-DNELINKEEL 394
+I FL+E R Y +L W +V+ + + + D + I+ EL
Sbjct: 291 ADIGKFLSEIVIRTYAKLLAMWKMIANLVELVRTHLFDTDVDSIDSMEL 339
>U39647-6|AAM51529.1| 505|Caenorhabditis elegans Twik family of
potassium channelsprotein 17, isoform a protein.
Length = 505
Score = 30.7 bits (66), Expect = 3.6
Identities = 38/169 (22%), Positives = 64/169 (37%), Gaps = 10/169 (5%)
Query: 227 VDDALKQIVQQMLPLASNYSIVRRFIEHCNMWSGQVLHALVAAIEILLKDYYTMIAQLET 286
V D QI+ + + L +N S + +L +L A E D +T QL T
Sbjct: 123 VFDIYSQIMNETIALTNNQSDQATIVSRMR----PLLESLSRAHEY--DDKFTDTNQLWT 176
Query: 287 EHMTGSLSLQKLWYFVLPTMHTMQVLAAIVTKIGKSELRGGAVLTVLHDKTNTLMGDARA 346
G + W F T++ + V+ + G + TV + A
Sbjct: 177 GEQDG---MTTRWTFAAATLYALTVITSTGYDHVTPATDPGRIFTVFFGLIGIPLMFITA 233
Query: 347 QEISLFLTERACRPYLNVLDQWIHKGTIVDPFQEFMIE-DNELINKEEL 394
+I FL+E R Y +L W +V+ + + + D + I+ EL
Sbjct: 234 ADIGKFLSEIVIRTYAKLLAMWKMIANLVELVRTHLFDTDVDSIDSMEL 282
>U39647-5|AAM51531.1| 576|Caenorhabditis elegans Twik family of
potassium channelsprotein 17, isoform c protein.
Length = 576
Score = 30.7 bits (66), Expect = 3.6
Identities = 38/169 (22%), Positives = 64/169 (37%), Gaps = 10/169 (5%)
Query: 227 VDDALKQIVQQMLPLASNYSIVRRFIEHCNMWSGQVLHALVAAIEILLKDYYTMIAQLET 286
V D QI+ + + L +N S + +L +L A E D +T QL T
Sbjct: 180 VFDIYSQIMNETIALTNNQSDQATIVSRMR----PLLESLSRAHEY--DDKFTDTNQLWT 233
Query: 287 EHMTGSLSLQKLWYFVLPTMHTMQVLAAIVTKIGKSELRGGAVLTVLHDKTNTLMGDARA 346
G + W F T++ + V+ + G + TV + A
Sbjct: 234 GEQDG---MTTRWTFAAATLYALTVITSTGYDHVTPATDPGRIFTVFFGLIGIPLMFITA 290
Query: 347 QEISLFLTERACRPYLNVLDQWIHKGTIVDPFQEFMIE-DNELINKEEL 394
+I FL+E R Y +L W +V+ + + + D + I+ EL
Sbjct: 291 ADIGKFLSEIVIRTYAKLLAMWKMIANLVELVRTHLFDTDVDSIDSMEL 339
>U39647-4|AAM51532.1| 562|Caenorhabditis elegans Twik family of
potassium channelsprotein 17, isoform d protein.
Length = 562
Score = 30.7 bits (66), Expect = 3.6
Identities = 38/169 (22%), Positives = 64/169 (37%), Gaps = 10/169 (5%)
Query: 227 VDDALKQIVQQMLPLASNYSIVRRFIEHCNMWSGQVLHALVAAIEILLKDYYTMIAQLET 286
V D QI+ + + L +N S + +L +L A E D +T QL T
Sbjct: 180 VFDIYSQIMNETIALTNNQSDQATIVSRMR----PLLESLSRAHEY--DDKFTDTNQLWT 233
Query: 287 EHMTGSLSLQKLWYFVLPTMHTMQVLAAIVTKIGKSELRGGAVLTVLHDKTNTLMGDARA 346
G + W F T++ + V+ + G + TV + A
Sbjct: 234 GEQDG---MTTRWTFAAATLYALTVITSTGYDHVTPATDPGRIFTVFFGLIGIPLMFITA 290
Query: 347 QEISLFLTERACRPYLNVLDQWIHKGTIVDPFQEFMIE-DNELINKEEL 394
+I FL+E R Y +L W +V+ + + + D + I+ EL
Sbjct: 291 ADIGKFLSEIVIRTYAKLLAMWKMIANLVELVRTHLFDTDVDSIDSMEL 339
>U39647-3|AAW30673.1| 512|Caenorhabditis elegans Twik family of
potassium channelsprotein 17, isoform f protein.
Length = 512
Score = 30.7 bits (66), Expect = 3.6
Identities = 38/169 (22%), Positives = 64/169 (37%), Gaps = 10/169 (5%)
Query: 227 VDDALKQIVQQMLPLASNYSIVRRFIEHCNMWSGQVLHALVAAIEILLKDYYTMIAQLET 286
V D QI+ + + L +N S + +L +L A E D +T QL T
Sbjct: 116 VFDIYSQIMNETIALTNNQSDQATIVSRMR----PLLESLSRAHEY--DDKFTDTNQLWT 169
Query: 287 EHMTGSLSLQKLWYFVLPTMHTMQVLAAIVTKIGKSELRGGAVLTVLHDKTNTLMGDARA 346
G + W F T++ + V+ + G + TV + A
Sbjct: 170 GEQDG---MTTRWTFAAATLYALTVITSTGYDHVTPATDPGRIFTVFFGLIGIPLMFITA 226
Query: 347 QEISLFLTERACRPYLNVLDQWIHKGTIVDPFQEFMIE-DNELINKEEL 394
+I FL+E R Y +L W +V+ + + + D + I+ EL
Sbjct: 227 ADIGKFLSEIVIRTYAKLLAMWKMIANLVELVRTHLFDTDVDSIDSMEL 275
>U39647-2|AAM51530.1| 498|Caenorhabditis elegans Twik family of
potassium channelsprotein 17, isoform b protein.
Length = 498
Score = 30.7 bits (66), Expect = 3.6
Identities = 38/169 (22%), Positives = 64/169 (37%), Gaps = 10/169 (5%)
Query: 227 VDDALKQIVQQMLPLASNYSIVRRFIEHCNMWSGQVLHALVAAIEILLKDYYTMIAQLET 286
V D QI+ + + L +N S + +L +L A E D +T QL T
Sbjct: 116 VFDIYSQIMNETIALTNNQSDQATIVSRMR----PLLESLSRAHEY--DDKFTDTNQLWT 169
Query: 287 EHMTGSLSLQKLWYFVLPTMHTMQVLAAIVTKIGKSELRGGAVLTVLHDKTNTLMGDARA 346
G + W F T++ + V+ + G + TV + A
Sbjct: 170 GEQDG---MTTRWTFAAATLYALTVITSTGYDHVTPATDPGRIFTVFFGLIGIPLMFITA 226
Query: 347 QEISLFLTERACRPYLNVLDQWIHKGTIVDPFQEFMIE-DNELINKEEL 394
+I FL+E R Y +L W +V+ + + + D + I+ EL
Sbjct: 227 ADIGKFLSEIVIRTYAKLLAMWKMIANLVELVRTHLFDTDVDSIDSMEL 275
>AF083651-1|AAC32862.1| 562|Caenorhabditis elegans putative
potassium channel subunitn2P17m2-1 protein.
Length = 562
Score = 30.7 bits (66), Expect = 3.6
Identities = 38/169 (22%), Positives = 64/169 (37%), Gaps = 10/169 (5%)
Query: 227 VDDALKQIVQQMLPLASNYSIVRRFIEHCNMWSGQVLHALVAAIEILLKDYYTMIAQLET 286
V D QI+ + + L +N S + +L +L A E D +T QL T
Sbjct: 180 VFDIYSQIMNETIALTNNQSDQATIVSRMR----PLLESLSRAHEY--DDKFTDTNQLWT 233
Query: 287 EHMTGSLSLQKLWYFVLPTMHTMQVLAAIVTKIGKSELRGGAVLTVLHDKTNTLMGDARA 346
G + W F T++ + V+ + G + TV + A
Sbjct: 234 GEQDG---MTTRWTFAAATLYALTVITSTGYDHVTPATDPGRIFTVFFGLIGIPLMFITA 290
Query: 347 QEISLFLTERACRPYLNVLDQWIHKGTIVDPFQEFMIE-DNELINKEEL 394
+I FL+E R Y +L W +V+ + + + D + I+ EL
Sbjct: 291 ADIGKFLSEIVIRTYAKLLAMWKMIANLVELVRTHLFDTDVDSIDSMEL 339
>AF083649-1|AAC32860.1| 381|Caenorhabditis elegans putative
potassium channel subunitn2P17m3 protein.
Length = 381
Score = 30.7 bits (66), Expect = 3.6
Identities = 38/169 (22%), Positives = 64/169 (37%), Gaps = 10/169 (5%)
Query: 227 VDDALKQIVQQMLPLASNYSIVRRFIEHCNMWSGQVLHALVAAIEILLKDYYTMIAQLET 286
V D QI+ + + L +N S + +L +L A E D +T QL T
Sbjct: 123 VFDIYSQIMNETIALTNNQSDQATIVSRMR----PLLESLSRAHEY--DDKFTDTNQLWT 176
Query: 287 EHMTGSLSLQKLWYFVLPTMHTMQVLAAIVTKIGKSELRGGAVLTVLHDKTNTLMGDARA 346
G + W F T++ + V+ + G + TV + A
Sbjct: 177 GEQDG---MTTRWTFAAATLYALTVITSTGYDHVTPATDPGRIFTVFFGLIGIPLMFITA 233
Query: 347 QEISLFLTERACRPYLNVLDQWIHKGTIVDPFQEFMIE-DNELINKEEL 394
+I FL+E R Y +L W +V+ + + + D + I+ EL
Sbjct: 234 ADIGKFLSEIVIRTYAKLLAMWKMIANLVELVRTHLFDTDVDSIDSMEL 282
>AF083648-1|AAC32859.1| 544|Caenorhabditis elegans putative
potassium channel subunitn2P17m2-3 protein.
Length = 544
Score = 30.7 bits (66), Expect = 3.6
Identities = 38/169 (22%), Positives = 64/169 (37%), Gaps = 10/169 (5%)
Query: 227 VDDALKQIVQQMLPLASNYSIVRRFIEHCNMWSGQVLHALVAAIEILLKDYYTMIAQLET 286
V D QI+ + + L +N S + +L +L A E D +T QL T
Sbjct: 180 VFDIYSQIMNETIALTNNQSDQATIVSRMR----PLLESLSRAHEY--DDKFTDTNQLWT 233
Query: 287 EHMTGSLSLQKLWYFVLPTMHTMQVLAAIVTKIGKSELRGGAVLTVLHDKTNTLMGDARA 346
G + W F T++ + V+ + G + TV + A
Sbjct: 234 GEQDG---MTTRWTFAAATLYALTVITSTGYDHVTPATDPGRIFTVFFGLIGIPLMFITA 290
Query: 347 QEISLFLTERACRPYLNVLDQWIHKGTIVDPFQEFMIE-DNELINKEEL 394
+I FL+E R Y +L W +V+ + + + D + I+ EL
Sbjct: 291 ADIGKFLSEIVIRTYAKLLAMWKMIANLVELVRTHLFDTDVDSIDSMEL 339
>AF083647-1|AAC32858.1| 576|Caenorhabditis elegans putative
potassium channel subunitn2P17m2-2 protein.
Length = 576
Score = 30.7 bits (66), Expect = 3.6
Identities = 38/169 (22%), Positives = 64/169 (37%), Gaps = 10/169 (5%)
Query: 227 VDDALKQIVQQMLPLASNYSIVRRFIEHCNMWSGQVLHALVAAIEILLKDYYTMIAQLET 286
V D QI+ + + L +N S + +L +L A E D +T QL T
Sbjct: 180 VFDIYSQIMNETIALTNNQSDQATIVSRMR----PLLESLSRAHEY--DDKFTDTNQLWT 233
Query: 287 EHMTGSLSLQKLWYFVLPTMHTMQVLAAIVTKIGKSELRGGAVLTVLHDKTNTLMGDARA 346
G + W F T++ + V+ + G + TV + A
Sbjct: 234 GEQDG---MTTRWTFAAATLYALTVITSTGYDHVTPATDPGRIFTVFFGLIGIPLMFITA 290
Query: 347 QEISLFLTERACRPYLNVLDQWIHKGTIVDPFQEFMIE-DNELINKEEL 394
+I FL+E R Y +L W +V+ + + + D + I+ EL
Sbjct: 291 ADIGKFLSEIVIRTYAKLLAMWKMIANLVELVRTHLFDTDVDSIDSMEL 339
>AF083644-1|AAC32855.1| 498|Caenorhabditis elegans putative
potassium channel subunitn2P17m1-1 protein.
Length = 498
Score = 30.7 bits (66), Expect = 3.6
Identities = 38/169 (22%), Positives = 64/169 (37%), Gaps = 10/169 (5%)
Query: 227 VDDALKQIVQQMLPLASNYSIVRRFIEHCNMWSGQVLHALVAAIEILLKDYYTMIAQLET 286
V D QI+ + + L +N S + +L +L A E D +T QL T
Sbjct: 116 VFDIYSQIMNETIALTNNQSDQATIVSRMR----PLLESLSRAHEY--DDKFTDTNQLWT 169
Query: 287 EHMTGSLSLQKLWYFVLPTMHTMQVLAAIVTKIGKSELRGGAVLTVLHDKTNTLMGDARA 346
G + W F T++ + V+ + G + TV + A
Sbjct: 170 GEQDG---MTTRWTFAAATLYALTVITSTGYDHVTPATDPGRIFTVFFGLIGIPLMFITA 226
Query: 347 QEISLFLTERACRPYLNVLDQWIHKGTIVDPFQEFMIE-DNELINKEEL 394
+I FL+E R Y +L W +V+ + + + D + I+ EL
Sbjct: 227 ADIGKFLSEIVIRTYAKLLAMWKMIANLVELVRTHLFDTDVDSIDSMEL 275
>AF083643-1|AAC32854.1| 512|Caenorhabditis elegans putative
potassium channel subunitn2P17m1-2 protein.
Length = 512
Score = 30.7 bits (66), Expect = 3.6
Identities = 38/169 (22%), Positives = 64/169 (37%), Gaps = 10/169 (5%)
Query: 227 VDDALKQIVQQMLPLASNYSIVRRFIEHCNMWSGQVLHALVAAIEILLKDYYTMIAQLET 286
V D QI+ + + L +N S + +L +L A E D +T QL T
Sbjct: 116 VFDIYSQIMNETIALTNNQSDQATIVSRMR----PLLESLSRAHEY--DDKFTDTNQLWT 169
Query: 287 EHMTGSLSLQKLWYFVLPTMHTMQVLAAIVTKIGKSELRGGAVLTVLHDKTNTLMGDARA 346
G + W F T++ + V+ + G + TV + A
Sbjct: 170 GEQDG---MTTRWTFAAATLYALTVITSTGYDHVTPATDPGRIFTVFFGLIGIPLMFITA 226
Query: 347 QEISLFLTERACRPYLNVLDQWIHKGTIVDPFQEFMIE-DNELINKEEL 394
+I FL+E R Y +L W +V+ + + + D + I+ EL
Sbjct: 227 ADIGKFLSEIVIRTYAKLLAMWKMIANLVELVRTHLFDTDVDSIDSMEL 275
>Z49068-9|CAA88861.1| 540|Caenorhabditis elegans Hypothetical
protein K01C8.10 protein.
Length = 540
Score = 29.9 bits (64), Expect = 6.3
Identities = 14/39 (35%), Positives = 22/39 (56%)
Query: 363 NVLDQWIHKGTIVDPFQEFMIEDNELINKEELPVDYSAD 401
N+L + IH TI + FQ E +++++ PVD S D
Sbjct: 121 NLLSKGIHPTTISESFQSAAAEAEKILDEMSSPVDLSND 159
>U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein.
Length = 540
Score = 29.9 bits (64), Expect = 6.3
Identities = 14/39 (35%), Positives = 22/39 (56%)
Query: 363 NVLDQWIHKGTIVDPFQEFMIEDNELINKEELPVDYSAD 401
N+L + IH TI + FQ E +++++ PVD S D
Sbjct: 121 NLLSKGIHPTTISESFQSAAAEAEKILDEMSSPVDLSND 159
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.322 0.137 0.412
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,942,437
Number of Sequences: 27539
Number of extensions: 650709
Number of successful extensions: 1637
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 1635
Number of HSP's gapped (non-prelim): 16
length of query: 694
length of database: 12,573,161
effective HSP length: 86
effective length of query: 608
effective length of database: 10,204,807
effective search space: 6204522656
effective search space used: 6204522656
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 63 (29.5 bits)
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