GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000978-TA|BGIBMGA000978-PA|undefined
         (158 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.            30   0.039
AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    24   2.6  
AY193729-1|AAO62002.1|  499|Anopheles gambiae cytochrome P450 CY...    22   7.9  
AB090817-1|BAC57909.1|  344|Anopheles gambiae gag-like protein p...    22   7.9  

>DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.
          Length = 847

 Score = 29.9 bits (64), Expect = 0.039
 Identities = 22/69 (31%), Positives = 29/69 (42%), Gaps = 1/69 (1%)

Query: 34  PLSITWFPDQLYFAINKKKLTKKLRVLNACSNTVYIHC-CGLWNEKARLGASWNCHPRTR 92
           PL   W  D +   I   KLT  +   +  ++TV IHC    W E        N +P  R
Sbjct: 531 PLLPAWILDNVLEQIVLVKLTAAVIEWDPLTDTVPIHCWIHPWTELLGPKMEGNIYPAIR 590

Query: 93  LRLAPGLMG 101
            +LA  L G
Sbjct: 591 EKLARALKG 599


>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 23.8 bits (49), Expect = 2.6
 Identities = 15/40 (37%), Positives = 19/40 (47%)

Query: 6   LNQDKRNGRISKLSLGNKITNISPSSIRPLSITWFPDQLY 45
           L Q  RNG    L+   K  N+S  +IR L I+    Q Y
Sbjct: 257 LLQTDRNGNSKNLTGSPKSQNLSSPTIRSLHISPHHGQSY 296


>AY193729-1|AAO62002.1|  499|Anopheles gambiae cytochrome P450
           CYPm3r9 protein.
          Length = 499

 Score = 22.2 bits (45), Expect = 7.9
 Identities = 9/32 (28%), Positives = 16/32 (50%)

Query: 11  RNGRISKLSLGNKITNISPSSIRPLSITWFPD 42
           RN      ++G KI  ISP + + + +   P+
Sbjct: 199 RNSDAEFRAMGRKIFEISPGTFKTMMMNGMPE 230


>AB090817-1|BAC57909.1|  344|Anopheles gambiae gag-like protein
           protein.
          Length = 344

 Score = 22.2 bits (45), Expect = 7.9
 Identities = 10/33 (30%), Positives = 16/33 (48%)

Query: 62  ACSNTVYIHCCGLWNEKARLGASWNCHPRTRLR 94
           AC+N+V    CG  ++      S+ C  R  +R
Sbjct: 311 ACTNSVKCLDCGTRSQNLHATGSYMCPRRRTIR 343


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.320    0.133    0.403 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,764
Number of Sequences: 2123
Number of extensions: 5184
Number of successful extensions: 14
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 10
Number of HSP's gapped (non-prelim): 4
length of query: 158
length of database: 516,269
effective HSP length: 59
effective length of query: 99
effective length of database: 391,012
effective search space: 38710188
effective search space used: 38710188
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 45 (22.2 bits)